FFCP PHASE1:Hg19::chr1:155290627..155290639,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:155290627..155290639,+ to FFCP PHASE1:Hg19::chr1:155290627..155290639,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23623 | |EntrezGene=23623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17153 | |HGNC=17153 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BVN2,B3KWM9 | |UniProt=Q9BVN2,B3KWM9 | ||
|association_with_transcript=0bp_to_NM_001105203,NM_001105204,uc001fkj.2,uc001fkk.2_5end | |||
|cluster_id=chr1:155290627..155290639,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_23_at_RUSC1_5end | |||
|id=chr1:155290627..155290639,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.29e-24;3!UBERON:0006601;5.63e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.91e-70!57;UBERON:0005068!3.91e-70!57;UBERON:0006241!3.91e-70!57;UBERON:0007135!3.91e-70!57;UBERON:0002616!4.72e-64!59;UBERON:0001017!8.80e-61!82;UBERON:0005743!1.97e-59!86;UBERON:0000955!1.91e-57!69;UBERON:0006238!1.91e-57!69;UBERON:0000073!1.46e-56!94;UBERON:0001016!1.46e-56!94;UBERON:0003075!3.46e-52!86;UBERON:0007284!3.46e-52!86;UBERON:0001869!4.87e-52!32;UBERON:0002020!6.21e-52!34;UBERON:0003528!6.21e-52!34;UBERON:0001893!1.44e-51!34;UBERON:0002791!1.49e-49!33;UBERON:0002346!3.44e-49!90;UBERON:0003080!4.50e-49!42;UBERON:0002780!2.94e-47!41;UBERON:0001890!2.94e-47!41;UBERON:0006240!2.94e-47!41;UBERON:0007023!4.57e-40!115;UBERON:0000956!3.08e-39!25;UBERON:0000203!3.08e-39!25;UBERON:0002619!5.04e-38!22;UBERON:0003056!1.16e-36!61;UBERON:0001950!3.88e-34!20;UBERON:0000153!5.98e-34!129;UBERON:0007811!5.98e-34!129;UBERON:0000033!2.04e-33!123;UBERON:0004121!2.82e-29!169;UBERON:0000924!3.24e-28!173;UBERON:0006601!3.24e-28!173;UBERON:0003076!2.25e-21!15;UBERON:0003057!2.25e-21!15;UBERON:0004733!8.44e-20!12;UBERON:0002028!8.44e-20!12;UBERON:0007277!8.44e-20!12;UBERON:0000025!2.25e-19!194;UBERON:0004732!4.70e-18!13;UBERON:0004111!1.04e-15!241;UBERON:0000477!9.10e-15!286;UBERON:0002680!2.38e-14!9;UBERON:0001895!2.38e-14!9;UBERON:0010092!2.38e-14!9;UBERON:0002420!5.70e-14!9;UBERON:0007245!5.70e-14!9;UBERON:0010009!5.70e-14!9;UBERON:0010011!5.70e-14!9;UBERON:0000454!5.70e-14!9;UBERON:0002308!6.92e-14!9;UBERON:0000125!6.92e-14!9;UBERON:0000200!2.31e-13!6;UBERON:0001871!5.36e-13!7;UBERON:0000064!6.96e-13!219;UBERON:0002298!1.26e-12!8;UBERON:0000475!1.88e-12!365;UBERON:0000483!3.21e-12!309;UBERON:0000119!6.08e-12!312;UBERON:0001872!1.33e-11!5;UBERON:0000349!3.59e-11!5;UBERON:0009663!2.51e-10!7;UBERON:0000369!4.94e-09!4;UBERON:0002435!4.94e-09!4;UBERON:0000204!4.94e-09!4;UBERON:0010082!4.94e-09!4;UBERON:0002037!7.04e-09!6;UBERON:0006215!7.04e-09!6;UBERON:0000481!1.63e-07!347;UBERON:0002021!2.25e-07!5;UBERON:0000988!2.84e-07!3;UBERON:0002771!3.15e-07!3;UBERON:0001896!3.57e-07!3;UBERON:0005290!3.57e-07!3;UBERON:0010096!3.57e-07!3;UBERON:0005383!3.96e-07!3;UBERON:0005382!3.96e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.02e-40;22!UBERON:0001950;8.18e-37;20!UBERON:0000956;8.07e-36;25!UBERON:0000203;8.07e-36;25!UBERON:0001869;1.51e-35;32!UBERON:0003528;2.09e-34;34!UBERON:0002020;2.09e-34;34!UBERON:0001893;3.31e-33;34!UBERON:0002791;5.81e-31;32!UBERON:0001872;7.03e-26;5!UBERON:0000073;7.89e-26;53!UBERON:0002616;7.89e-26;53!UBERON:0004733;2.65e-23;12!UBERON:0002028;2.65e-23;12!UBERON:0002680;6.92e-22;9!UBERON:0001895;6.92e-22;9!UBERON:0000200;1.29e-21;6!UBERON:0004732;1.76e-21;13!UBERON:0000955;2.34e-21;68!UBERON:0002780;1.58e-20;41!UBERON:0001890;1.58e-20;41!UBERON:0001016;1.08e-18;83!UBERON:0001017;1.77e-18;75!UBERON:0002037;1.73e-12;6!UBERON:0002298;1.73e-12;6!UBERON:0000988;1.51e-11;3!UBERON:0001871;5.47e-11;6!UBERON:0002581;2.76e-09;1!UBERON:0002902;2.76e-09;1!UBERON:0003112;2.76e-09;1!UBERON:0011158;2.76e-09;1!UBERON:0009899;2.76e-09;1!UBERON:0007190;2.76e-09;1!UBERON:0003128;2.76e-09;1!UBERON:0001703;2.76e-09;1!UBERON:0002241;2.76e-09;1!UBERON:0002021;1.82e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.34e-50,53;UBERON:0002616,5.34e-50,53;UBERON:0001049,3.35e-47,56;UBERON:0005068,3.35e-47,56;UBERON:0006241,3.35e-47,56;UBERON:0007135,3.35e-47,56;UBERON:0001017,4.03e-43,81;UBERON:0000955,3.08e-42,68;UBERON:0006238,3.08e-42,68;UBERON:0002619,1.29e-40,22;UBERON:0001869,5.97e-39,32;UBERON:0001016,1.46e-38,89;UBERON:0001950,9.99e-37,20;UBERON:0001893,1.34e-36,34;UBERON:0003528,1.42e-36,34;UBERON:0002020,1.42e-36,34;UBERON:0000956,9.98e-36,25;UBERON:0000203,9.98e-36,25;UBERON:0002791,3.59e-33,32;UBERON:0003075,2.07e-31,82;UBERON:0007284,2.07e-31,82;UBERON:0002780,3.97e-30,41;UBERON:0001890,3.97e-30,41;UBERON:0003080,3.97e-30,41;UBERON:0006240,3.97e-30,41;UBERON:0002346,8.11e-30,86;UBERON:0001872,1.11e-25,5;UBERON:0010371,3.82e-24,104;UBERON:0004733,4.63e-23,12;UBERON:0002028,4.63e-23,12;UBERON:0007277,4.63e-23,12;UBERON:0002680,9.89e-22,9;UBERON:0001895,9.89e-22,9;UBERON:0010092,9.89e-22,9;UBERON:0000200,1.10e-21,6;UBERON:0004732,2.93e-21,13;UBERON:0010314,1.26e-20,132;UBERON:0003056,1.11e-19,61;UBERON:0004121,1.06e-18,171;UBERON:0000924,1.06e-18,171;UBERON:0006601,1.06e-18,171;UBERON:0003076,2.25e-18,15;UBERON:0003057,2.25e-18,15;UBERON:0007023,4.46e-17,114;UBERON:0011216,1.20e-16,223;UBERON:0002037,1.66e-12,6;UBERON:0006215,1.66e-12,6;UBERON:0002298,3.12e-12,6;UBERON:0000025,1.32e-11,192;UBERON:0000988,2.44e-11,3;UBERON:0001871,6.29e-11,6;UBERON:0003112,1.43e-09,1;UBERON:0011158,1.43e-09,1;UBERON:0003128,1.43e-09,1;UBERON:0001703,1.43e-09,1;UBERON:0002241,1.43e-09,1;UBERON:0004761,1.43e-09,1;UBERON:0009617,1.43e-09,1;UBERON:0002902,1.84e-09,1;UBERON:0009899,1.84e-09,1;UBERON:0002581,2.77e-09,1;UBERON:0007190,3.25e-09,1;UBERON:0004111,1.31e-08,240;UBERON:0002021,1.55e-07,5 | |||
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| ||
|short_description=p23@RUSC1 | |||
}} | }} |
Latest revision as of 12:26, 17 September 2015
Short description: | p23@RUSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_RUSC1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_NM_001105203, NM_001105204, uc001fkj.2, uc001fkk.2_5end |
EntrezGene: | RUSC1 |
HGNC: | 17153 |
UniProt: | Q9BVN2B3KWM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data