FFCP PHASE1:Hg19::chr8:24809946..24809957,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4747 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7739 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-267bp_to_BC037803_5end | |||
|cluster_id=chr8:24809946..24809957,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_2_at_NEFL_5end | |||
|id=chr8:24809946..24809957,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.25e-13;3!UBERON:0003057;3.25e-13;3!UBERON:0006222;2.50e-10;1!UBERON:0006601;4.85e-10;82!UBERON:0006238;5.14e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.26e-55!82;UBERON:0005743!3.42e-52!86;UBERON:0000073!3.15e-50!94;UBERON:0001016!3.15e-50!94;UBERON:0001049!5.46e-47!57;UBERON:0005068!5.46e-47!57;UBERON:0006241!5.46e-47!57;UBERON:0007135!5.46e-47!57;UBERON:0000955!1.18e-45!69;UBERON:0006238!1.18e-45!69;UBERON:0002616!2.96e-39!59;UBERON:0002020!1.45e-36!34;UBERON:0003528!1.45e-36!34;UBERON:0002619!7.25e-34!22;UBERON:0004121!1.83e-33!169;UBERON:0001893!3.56e-33!34;UBERON:0003075!8.35e-33!86;UBERON:0007284!8.35e-33!86;UBERON:0001869!9.42e-33!32;UBERON:0000924!2.49e-32!173;UBERON:0006601!2.49e-32!173;UBERON:0002780!7.28e-32!41;UBERON:0001890!7.28e-32!41;UBERON:0006240!7.28e-32!41;UBERON:0002791!3.11e-31!33;UBERON:0003080!6.16e-31!42;UBERON:0002346!7.72e-31!90;UBERON:0001950!1.16e-29!20;UBERON:0000956!2.75e-29!25;UBERON:0000203!2.75e-29!25;UBERON:0000033!2.53e-27!123;UBERON:0000153!1.80e-25!129;UBERON:0007811!1.80e-25!129;UBERON:0007023!4.93e-21!115;UBERON:0003056!1.31e-20!61;UBERON:0003076!3.58e-17!15;UBERON:0003057!3.58e-17!15;UBERON:0000200!4.34e-15!6;UBERON:0002298!1.34e-13!8;UBERON:0000475!1.93e-11!365;UBERON:0004733!2.21e-11!12;UBERON:0002028!2.21e-11!12;UBERON:0007277!2.21e-11!12;UBERON:0000025!2.28e-11!194;UBERON:0004111!2.92e-11!241;UBERON:0001871!1.45e-10!7;UBERON:0004732!2.19e-10!13;UBERON:0000477!2.92e-09!286;UBERON:0000483!7.92e-09!309;UBERON:0002308!9.47e-09!9;UBERON:0000125!9.47e-09!9;UBERON:0000119!1.29e-08!312;UBERON:0000988!1.50e-08!3;UBERON:0001872!1.83e-08!5;UBERON:0002771!2.44e-08!3;UBERON:0002240!3.02e-08!3;UBERON:0000349!4.54e-08!5;UBERON:0006331!5.72e-08!3;UBERON:0002021!7.40e-08!5;UBERON:0001896!3.20e-07!3;UBERON:0005290!3.20e-07!3;UBERON:0010096!3.20e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000200;6.10e-38;6!UBERON:0000988;7.13e-28;3!UBERON:0002619;2.28e-24;22!UBERON:0000956;1.89e-21;25!UBERON:0000203;1.89e-21;25!UBERON:0003528;1.95e-21;34!UBERON:0002020;1.95e-21;34!UBERON:0001950;1.25e-20;20!UBERON:0001869;1.55e-19;32!UBERON:0002771;1.79e-19;2!UBERON:0002148;2.48e-19;2!UBERON:0006331;2.48e-19;2!UBERON:0009662;2.48e-19;2!UBERON:0001017;1.38e-18;75!UBERON:0000955;6.20e-18;68!UBERON:0001893;3.10e-17;34!UBERON:0001872;5.44e-17;5!UBERON:0002780;1.89e-16;41!UBERON:0001890;1.89e-16;41!UBERON:0000073;4.45e-15;53!UBERON:0002616;4.45e-15;53!UBERON:0002791;2.52e-14;32!UBERON:0002298;2.93e-14;6!UBERON:0002240;3.25e-13;3!UBERON:0005174;3.25e-13;3!UBERON:0001137;3.25e-13;3!UBERON:0001016;3.69e-13;83!UBERON:0002581;2.50e-10;1!UBERON:0003112;2.50e-10;1!UBERON:0011158;2.50e-10;1!UBERON:0007190;2.50e-10;1!UBERON:0003128;2.50e-10;1!UBERON:0001703;2.50e-10;1!UBERON:0002241;2.50e-10;1!UBERON:0002680;1.09e-09;9!UBERON:0001895;1.09e-09;9!UBERON:0011216;1.25e-07;132!UBERON:0004733;2.19e-07;12!UBERON:0002028;2.19e-07;12!UBERON:0004732;7.48e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.87e-38,56;UBERON:0005068,4.87e-38,56;UBERON:0006241,4.87e-38,56;UBERON:0007135,4.87e-38,56;UBERON:0000200,1.17e-37,6;UBERON:0001017,1.37e-36,81;UBERON:0000955,9.20e-35,68;UBERON:0006238,9.20e-35,68;UBERON:0001016,9.79e-33,89;UBERON:0000073,1.53e-30,53;UBERON:0002616,1.53e-30,53;UBERON:0000988,6.84e-28,3;UBERON:0003075,2.47e-25,82;UBERON:0007284,2.47e-25,82;UBERON:0003528,1.43e-24,34;UBERON:0002020,1.43e-24,34;UBERON:0002780,2.37e-24,41;UBERON:0001890,2.37e-24,41;UBERON:0003080,2.37e-24,41;UBERON:0006240,2.37e-24,41;UBERON:0002619,2.44e-24,22;UBERON:0002346,4.74e-24,86;UBERON:0007023,6.92e-23,114;UBERON:0000956,2.00e-21,25;UBERON:0000203,2.00e-21,25;UBERON:0001869,5.65e-21,32;UBERON:0001950,1.37e-20,20;UBERON:0001893,1.04e-19,34;UBERON:0002771,1.49e-19,2;UBERON:0002148,1.64e-19,2;UBERON:0006331,1.64e-19,2;UBERON:0009662,1.64e-19,2;UBERON:0010371,1.75e-19,104;UBERON:0010314,6.47e-17,132;UBERON:0001872,6.97e-17,5;UBERON:0002791,1.12e-16,32;UBERON:0003056,5.92e-16,61;UBERON:0004121,6.22e-16,171;UBERON:0000924,6.22e-16,171;UBERON:0006601,6.22e-16,171;UBERON:0003076,4.33e-15,15;UBERON:0003057,4.33e-15,15;UBERON:0002298,2.87e-14,6;UBERON:0002240,3.79e-13,3;UBERON:0005174,3.79e-13,3;UBERON:0001137,3.79e-13,3;UBERON:0011216,5.58e-13,223;UBERON:0003112,3.96e-10,1;UBERON:0011158,3.96e-10,1;UBERON:0003128,3.96e-10,1;UBERON:0001703,3.96e-10,1;UBERON:0002241,3.96e-10,1;UBERON:0004761,3.96e-10,1;UBERON:0009617,3.96e-10,1;UBERON:0002581,4.33e-10,1;UBERON:0007190,4.75e-10,1;UBERON:0002680,1.08e-09,9;UBERON:0001895,1.08e-09,9;UBERON:0010092,1.08e-09,9;UBERON:0000025,2.20e-09,192;UBERON:0004733,2.17e-07,12;UBERON:0002028,2.17e-07,12;UBERON:0007277,2.17e-07,12;UBERON:0004111,5.70e-07,240;UBERON:0004732,7.41e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,2.22643435588443,1.99613798001194,0,0,0,0,0,0,1.72371686620732,0,0,0,0.120596438625408,0,0,0.591095237907095,0.87754158861589,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40558667435203,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0.518440956986236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0.235694034616795,0.67952103036807,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,1.59045937961861,0.681017030557878,0.160753148465019,0,0.415440338029185,0,0,0.485996453264197,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,1.72844298240254,0,0,0,0,0,0,0,2.06852730178481,1.98348902614035,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,10.006153721961,0.625954653532499,0.573409195690071,0.221858103073705,0.310482014706917,0.138348634936231,0,0,0.570930667089935,0,0.936669811613763,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0.512483037175893,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0.638535436228605,1.23069818544453,0.252071696221718,0.829887029570615,1.13032951942296,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,1.01306376927592,2.34323429584154,1.44680757550829,0.824405532520789,0,0,0,0,0,0,2.01770233331294,0,0,0,0,0,1.15548546060614,1.05236437700559,0,0.222462803784138,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769583617218004,0,0,0,0,0,0,1.37415926980462,0.594092800654172,2.113278637917,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.815897882290976,0.872701380680755,0,0,0,0,0,0,0,0.203977659483963,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@NEFL | |||
}} |
Latest revision as of 16:12, 17 September 2015
Short description: | p2@NEFL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NEFL_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -267bp_to_BC037803_5end |
EntrezGene: | NEFL |
HGNC: | 7739 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data