FFCP PHASE1:Hg19::chr20:9494913..9494925,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:9494913..9494925,+ to FFCP PHASE1:Hg19::chr20:9494913..9494925,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=24141 | |EntrezGene=24141 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |HGNC=16097 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJQ1 | |UniProt=Q9UJQ1 | ||
|association_with_transcript=-79bp_to_NM_001199897,NM_012261_5end | |||
|cluster_id=chr20:9494913..9494925,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_10_at_LAMP5_5end | |||
|id=chr20:9494913..9494925,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.18e-21;2!UBERON:0006222;1.60e-11;1!UBERON:0006601;3.91e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.70e-65!57;UBERON:0005068!9.70e-65!57;UBERON:0006241!9.70e-65!57;UBERON:0007135!9.70e-65!57;UBERON:0001869!5.91e-57!32;UBERON:0002616!3.43e-55!59;UBERON:0002020!2.21e-53!34;UBERON:0003528!2.21e-53!34;UBERON:0001893!2.71e-53!34;UBERON:0002780!4.03e-51!41;UBERON:0001890!4.03e-51!41;UBERON:0006240!4.03e-51!41;UBERON:0002791!1.64e-50!33;UBERON:0001017!6.50e-50!82;UBERON:0003080!9.39e-50!42;UBERON:0005743!1.03e-49!86;UBERON:0000073!4.52e-49!94;UBERON:0001016!4.52e-49!94;UBERON:0000955!3.04e-48!69;UBERON:0006238!3.04e-48!69;UBERON:0003075!5.60e-45!86;UBERON:0007284!5.60e-45!86;UBERON:0002346!1.48e-42!90;UBERON:0002619!5.60e-42!22;UBERON:0007023!1.38e-39!115;UBERON:0000956!1.45e-36!25;UBERON:0000203!1.45e-36!25;UBERON:0001950!1.93e-36!20;UBERON:0003056!1.23e-34!61;UBERON:0000033!1.78e-26!123;UBERON:0000153!8.08e-25!129;UBERON:0007811!8.08e-25!129;UBERON:0002420!1.02e-23!9;UBERON:0007245!1.02e-23!9;UBERON:0010009!1.02e-23!9;UBERON:0010011!1.02e-23!9;UBERON:0000454!1.02e-23!9;UBERON:0004121!5.72e-23!169;UBERON:0000924!3.32e-22!173;UBERON:0006601!3.32e-22!173;UBERON:0000200!1.70e-19!6;UBERON:0002308!3.20e-18!9;UBERON:0000125!3.20e-18!9;UBERON:0009663!1.29e-17!7;UBERON:0000349!6.60e-17!5;UBERON:0003076!1.74e-15!15;UBERON:0003057!1.74e-15!15;UBERON:0000369!9.93e-15!4;UBERON:0002435!9.93e-15!4;UBERON:0000204!9.93e-15!4;UBERON:0010082!9.93e-15!4;UBERON:0001871!1.07e-14!7;UBERON:0000025!1.27e-12!194;UBERON:0004733!3.85e-12!12;UBERON:0002028!3.85e-12!12;UBERON:0007277!3.85e-12!12;UBERON:0005383!1.74e-11!3;UBERON:0005382!1.74e-11!3;UBERON:0004732!3.99e-11!13;UBERON:0001872!6.15e-11!5;UBERON:0002771!1.59e-10!3;UBERON:0001896!1.92e-10!3;UBERON:0005290!1.92e-10!3;UBERON:0010096!1.92e-10!3;UBERON:0002298!4.09e-10!8;UBERON:0004111!3.56e-09!241;UBERON:0000064!1.71e-08!219;UBERON:0001873!3.39e-08!2;UBERON:0010122!3.39e-08!2;UBERON:0001876!6.65e-08!2;UBERON:0001875!1.13e-07!2;UBERON:0006514!1.13e-07!2;UBERON:0001870!1.29e-07!2;UBERON:0001954!1.90e-07!2;UBERON:0003022!1.90e-07!2;UBERON:0002421!1.90e-07!2;UBERON:0002600!1.90e-07!2;UBERON:0000477!5.58e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;1.67e-41;4!UBERON:0002435;1.67e-41;4!UBERON:0000204;1.67e-41;4!UBERON:0002420;1.36e-40;9!UBERON:0007245;1.36e-40;9!UBERON:0010009;1.36e-40;9!UBERON:0010011;1.36e-40;9!UBERON:0000454;1.36e-40;9!UBERON:0000125;2.77e-40;9!UBERON:0002308;2.77e-40;9!UBERON:0003528;4.12e-37;34!UBERON:0002020;4.12e-37;34!UBERON:0009663;1.38e-36;7!UBERON:0001869;1.39e-33;32!UBERON:0002791;2.03e-32;32!UBERON:0005383;1.23e-31;3!UBERON:0005382;1.23e-31;3!UBERON:0001893;3.94e-31;34!UBERON:0002780;1.35e-23;41!UBERON:0001890;1.35e-23;41!UBERON:0000073;9.17e-22;53!UBERON:0002616;9.17e-22;53!UBERON:0001873;1.18e-21;2!UBERON:0001017;3.44e-20;75!UBERON:0000955;3.49e-19;68!UBERON:0001950;1.11e-16;20!UBERON:0002298;3.01e-15;6!UBERON:0002619;3.36e-15;22!UBERON:0001896;5.39e-14;3!UBERON:0005290;5.39e-14;3!UBERON:0001871;1.43e-13;6!UBERON:0000956;2.10e-13;25!UBERON:0000203;2.10e-13;25!UBERON:0001874;8.62e-12;1!UBERON:0001016;1.06e-11;83!UBERON:0001882;1.12e-11;1!UBERON:0005403;1.12e-11;1!UBERON:0002022;2.18e-11;1!UBERON:0002581;4.01e-11;1!UBERON:0007023;2.48e-09;114!UBERON:0000349;3.67e-09;5!UBERON:0001872;9.20e-09;5!UBERON:0004733;6.74e-08;12!UBERON:0002028;6.74e-08;12!UBERON:0000200;1.57e-07;6!UBERON:0004732;2.50e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.67e-41,4;UBERON:0002435,1.67e-41,4;UBERON:0000204,1.67e-41,4;UBERON:0010082,1.67e-41,4;UBERON:0002420,1.32e-40,9;UBERON:0007245,1.32e-40,9;UBERON:0010009,1.32e-40,9;UBERON:0010011,1.32e-40,9;UBERON:0000454,1.32e-40,9;UBERON:0000125,2.43e-40,9;UBERON:0002308,2.43e-40,9;UBERON:0003528,1.37e-39,34;UBERON:0002020,1.37e-39,34;UBERON:0000073,1.80e-39,53;UBERON:0002616,1.80e-39,53;UBERON:0001049,2.79e-37,56;UBERON:0005068,2.79e-37,56;UBERON:0006241,2.79e-37,56;UBERON:0007135,2.79e-37,56;UBERON:0009663,1.38e-36,7;UBERON:0002791,2.23e-35,32;UBERON:0001869,2.23e-35,32;UBERON:0000955,3.63e-34,68;UBERON:0006238,3.63e-34,68;UBERON:0001893,2.86e-33,34;UBERON:0002780,8.52e-33,41;UBERON:0001890,8.52e-33,41;UBERON:0003080,8.52e-33,41;UBERON:0006240,8.52e-33,41;UBERON:0001017,2.62e-32,81;UBERON:0005383,1.30e-31,3;UBERON:0005382,1.30e-31,3;UBERON:0001016,6.48e-29,89;UBERON:0003075,6.40e-25,82;UBERON:0007284,6.40e-25,82;UBERON:0002346,1.13e-23,86;UBERON:0007023,7.21e-23,114;UBERON:0003056,1.18e-21,61;UBERON:0001873,1.25e-21,2;UBERON:0010122,1.25e-21,2;UBERON:0010371,3.15e-19,104;UBERON:0001950,9.51e-17,20;UBERON:0002298,2.87e-15,6;UBERON:0002619,2.92e-15,22;UBERON:0010314,1.07e-14,132;UBERON:0004121,4.06e-14,171;UBERON:0000924,4.06e-14,171;UBERON:0006601,4.06e-14,171;UBERON:0001896,5.77e-14,3;UBERON:0005290,5.77e-14,3;UBERON:0010096,5.77e-14,3;UBERON:0001871,1.40e-13,6;UBERON:0000956,1.86e-13,25;UBERON:0000203,1.86e-13,25;UBERON:0001874,8.62e-12,1;UBERON:0001882,1.06e-11,1;UBERON:0005403,1.06e-11,1;UBERON:0002022,2.18e-11,1;UBERON:0002581,3.63e-11,1;UBERON:0011216,3.26e-10,223;UBERON:0000025,2.16e-09,192;UBERON:0000349,3.53e-09,5;UBERON:0001872,7.55e-09,5;UBERON:0004733,6.58e-08,12;UBERON:0002028,6.58e-08,12;UBERON:0007277,6.58e-08,12;UBERON:0000200,1.47e-07,6;UBERON:0004732,2.45e-07,13;UBERON:0004111,4.88e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14117339516596,0,0,0,0.642352300414798,0.403599414382095,0,0,0.614481528616916,0.447352215784832,0.500547425135725,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,5.76744607283102,0,0,0.422250816255987,0,0,0,0,0,0,0,0,5.11572370226872,0,0,0,0,1.02044907978036,0,0,0,0,0,0,0,0,0,0,6.20018970069687,12.6626260556678,0,0.110579259931225,0.591095237907095,1.31631238292384,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45102446878144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0.795229689809303,0.817220436669454,0,0,0,0,0,2.24773359634691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.80660409274515,0.751145584238999,1.14681839138014,0.332787154610557,1.17983165588629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0.323474434190045,0,0.218419276384028,0,0,0,0,0,0,0,0,0,6.23023483435657,0,0.159633859057151,0.82046545696302,0,0.622415272177961,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.945526184657525,1.56215619722769,0.826747186004736,0.760989722326882,0,0,0,0,0,0,0,0,0,0,0,0,0.815636795721981,1.24968269769413,0,0,0,17.2827148907602,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,2.24371917630019,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.827463966895162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14117339516596,0,0,0,0.642352300414798,0.403599414382095,0,0,0.614481528616916,0.447352215784832,0.500547425135725,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,5.76744607283102,0,0,0.422250816255987,0,0,0,0,0,0,0,0,5.11572370226872,0,0,0,0,1.02044907978036,0,0,0,0,0,0,0,0,0,0,6.20018970069687,12.6626260556678,0,0.110579259931225,0.591095237907095,1.31631238292384,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.45102446878144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,0.949661939338181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0.795229689809303,0.817220436669454,0,0,0,0,0,2.24773359634691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.80660409274515,0.751145584238999,1.14681839138014,0.332787154610557,1.17983165588629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0.323474434190045,0,0.218419276384028,0,0,0,0,0,0,0,0,0,6.23023483435657,0,0.159633859057151,0.82046545696302,0,0.622415272177961,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.945526184657525,1.56215619722769,0.826747186004736,0.760989722326882,0,0,0,0,0,0,0,0,0,0,0,0,0.815636795721981,1.24968269769413,0,0,0,17.2827148907602,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,2.24371917630019,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.827463966895162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@LAMP5 | |||
}} | }} |
Latest revision as of 17:27, 17 September 2015
Short description: | p10@LAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LAMP5_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -79bp_to_NM_001199897, NM_012261_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data