FFCP PHASE1:Hg19::chr15:48009508..48009526,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:48009508..48009526,+
|short_description=p7@SEMA6D
|description=CAGE_peak_7_at_SEMA6D_5end
|association_with_transcript=-33bp_to_ENST00000536845_5end
|Ent...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80031 | |EntrezGene=80031 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16770 | |HGNC=16770 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_ENST00000536845_5end | |||
|cluster_id=chr15:48009508..48009526,+ | |||
|description=CAGE_peak_7_at_SEMA6D_5end | |||
|id=chr15:48009508..48009526,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.65e-12;82!UBERON:0006222;8.72e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.35e-48!57;UBERON:0005068!1.35e-48!57;UBERON:0006241!1.35e-48!57;UBERON:0007135!1.35e-48!57;UBERON:0002780!1.70e-42!41;UBERON:0001890!1.70e-42!41;UBERON:0006240!1.70e-42!41;UBERON:0002616!1.04e-41!59;UBERON:0003080!3.80e-41!42;UBERON:0001017!2.05e-39!82;UBERON:0000955!5.26e-39!69;UBERON:0006238!5.26e-39!69;UBERON:0001893!8.03e-39!34;UBERON:0002020!8.76e-39!34;UBERON:0003528!8.76e-39!34;UBERON:0005743!2.14e-38!86;UBERON:0002791!1.01e-37!33;UBERON:0000073!7.19e-37!94;UBERON:0001016!7.19e-37!94;UBERON:0001869!2.30e-36!32;UBERON:0003075!2.63e-35!86;UBERON:0007284!2.63e-35!86;UBERON:0002346!3.97e-34!90;UBERON:0007023!5.86e-34!115;UBERON:0000956!1.64e-28!25;UBERON:0000203!1.64e-28!25;UBERON:0003056!7.17e-27!61;UBERON:0002619!1.32e-26!22;UBERON:0000153!1.41e-25!129;UBERON:0007811!1.41e-25!129;UBERON:0000033!4.80e-25!123;UBERON:0001950!1.80e-24!20;UBERON:0004121!5.49e-21!169;UBERON:0000924!9.90e-21!173;UBERON:0006601!9.90e-21!173;UBERON:0004111!1.25e-13!241;UBERON:0000477!1.65e-13!286;UBERON:0000025!4.40e-13!194;UBERON:0002308!1.35e-11!9;UBERON:0000125!1.35e-11!9;UBERON:0002420!2.43e-11!9;UBERON:0007245!2.43e-11!9;UBERON:0010009!2.43e-11!9;UBERON:0010011!2.43e-11!9;UBERON:0000454!2.43e-11!9;UBERON:0000475!9.80e-11!365;UBERON:0001871!1.98e-09!7;UBERON:0009663!2.56e-09!7;UBERON:0000481!3.62e-09!347;UBERON:0003076!5.80e-09!15;UBERON:0003057!5.80e-09!15;UBERON:0000483!9.22e-09!309;UBERON:0000064!1.07e-08!219;UBERON:0000119!1.81e-08!312;UBERON:0000062!3.48e-08!511;UBERON:0002298!7.10e-08!8;UBERON:0000200!1.00e-07!6;UBERON:0001872!2.20e-07!5;UBERON:0002021!3.12e-07!5;UBERON:0000349!6.70e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.09e-26;41!UBERON:0001890;7.09e-26;41!UBERON:0001950;1.82e-24;20!UBERON:0001893;9.73e-23;34!UBERON:0002619;3.48e-22;22!UBERON:0003528;5.66e-22;34!UBERON:0002020;5.66e-22;34!UBERON:0001869;1.63e-21;32!UBERON:0002791;8.12e-21;32!UBERON:0000956;2.02e-19;25!UBERON:0000203;2.02e-19;25!UBERON:0000073;6.97e-16;53!UBERON:0002616;6.97e-16;53!UBERON:0001017;4.15e-15;75!UBERON:0002784;9.13e-14;4!UBERON:0001016;1.91e-13;83!UBERON:0001894;2.36e-13;7!UBERON:0001905;4.13e-13;2!UBERON:0002757;4.13e-13;2!UBERON:0010134;4.13e-13;2!UBERON:0005408;4.13e-13;2!UBERON:0001899;4.13e-13;2!UBERON:0000955;5.01e-13;68!UBERON:0001872;1.25e-10;5!UBERON:0002021;1.25e-10;5!UBERON:0007023;1.36e-10;114!UBERON:0000988;1.02e-08;3!UBERON:0001870;3.12e-08;3!UBERON:0003296;5.85e-07;4!UBERON:0010133;5.85e-07;4!UBERON:0011216;7.52e-07;132!UBERON:0002581;8.72e-07;1!UBERON:0002902;8.72e-07;1!UBERON:0002336;8.72e-07;1!UBERON:0003112;8.72e-07;1!UBERON:0011215;8.72e-07;1!UBERON:0001018;8.72e-07;1!UBERON:0011158;8.72e-07;1!UBERON:0002473;8.72e-07;1!UBERON:0005340;8.72e-07;1!UBERON:0003544;8.72e-07;1!UBERON:0005970;8.72e-07;1!UBERON:0009899;8.72e-07;1!UBERON:0002316;8.72e-07;1!UBERON:0001020;8.72e-07;1!UBERON:0003128;8.72e-07;1!UBERON:0002437;8.72e-07;1!UBERON:0001703;8.72e-07;1!UBERON:0002241;8.72e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.97e-39,56;UBERON:0005068,3.97e-39,56;UBERON:0006241,3.97e-39,56;UBERON:0007135,3.97e-39,56;UBERON:0000073,1.36e-37,53;UBERON:0002616,1.36e-37,53;UBERON:0002780,4.80e-35,41;UBERON:0001890,4.80e-35,41;UBERON:0003080,4.80e-35,41;UBERON:0006240,4.80e-35,41;UBERON:0000955,2.71e-34,68;UBERON:0006238,2.71e-34,68;UBERON:0001017,5.92e-34,81;UBERON:0001016,3.91e-30,89;UBERON:0003075,4.46e-28,82;UBERON:0007284,4.46e-28,82;UBERON:0002346,1.44e-26,86;UBERON:0007023,1.31e-25,114;UBERON:0003056,2.17e-25,61;UBERON:0001950,1.04e-24,20;UBERON:0003528,1.71e-24,34;UBERON:0002020,1.71e-24,34;UBERON:0001893,2.18e-24,34;UBERON:0010371,2.39e-23,104;UBERON:0002619,2.09e-22,22;UBERON:0002791,4.49e-22,32;UBERON:0001869,4.49e-22,32;UBERON:0000956,1.29e-19,25;UBERON:0000203,1.29e-19,25;UBERON:0011216,6.37e-18,223;UBERON:0010314,2.16e-17,132;UBERON:0004121,2.43e-16,171;UBERON:0000924,2.43e-16,171;UBERON:0006601,2.43e-16,171;UBERON:0002784,6.64e-14,4;UBERON:0001894,2.29e-13,7;UBERON:0006222,2.29e-13,7;UBERON:0001905,4.14e-13,2;UBERON:0002757,4.14e-13,2;UBERON:0010134,4.14e-13,2;UBERON:0005408,4.14e-13,2;UBERON:0001899,4.14e-13,2;UBERON:0002021,1.05e-10,5;UBERON:0001872,1.28e-10,5;UBERON:0000025,1.36e-10,192;UBERON:0000988,9.08e-09,3;UBERON:0001870,1.60e-08,3;UBERON:0004111,1.59e-07,240;UBERON:0000483,5.33e-07,306;UBERON:0003296,5.86e-07,4;UBERON:0010133,5.86e-07,4;UBERON:0002336,6.02e-07,1;UBERON:0011215,6.02e-07,1;UBERON:0001018,6.02e-07,1;UBERON:0002473,6.02e-07,1;UBERON:0005340,6.02e-07,1;UBERON:0003544,6.02e-07,1;UBERON:0005970,6.02e-07,1;UBERON:0002316,6.02e-07,1;UBERON:0001020,6.02e-07,1;UBERON:0002437,6.02e-07,1;UBERON:0000119,7.02e-07,309;UBERON:0002902,7.15e-07,1;UBERON:0009899,7.15e-07,1;UBERON:0002581,8.02e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0.243947412259191,0.530119073285941,0.116193942869518,0.932949495138334,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0.719792448923265,1.20137223137567,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,1.27047312111232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.848432591722276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,1.20598527610407,0,0,0,0,0,0,2.6002644994473,0,0,0.173624994933292,4.42870692906919,0.482385754501632,3.05163472634166,0.442317039724898,0,0.438770794307945,0.21787692703798,0,0.0769502585037971,0,0.46112780877612,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0345239835768,1.22206028986725,0,0,0,1.55022605855557,0.802577647298789,1.1713222286267,0,0,0,0,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0.90392296312213,0,0,1.7727022867646,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.410716136675979,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0.806201669840715,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.850493793212345,0,0.788057072991982,0.891727998294968,0,0,0.383830394638891,0.714695326373367,0,0.25426853765475,0,0,0,0,0,0,0,0,0,2.97350799631566,0.52893040697076,0,0,0.213574825135389,0.471612915298998,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,1.77213635993397,0.976210119215705,0.3755727921195,0.573409195690071,0.332787154610557,0.869349641179368,1.52183498429854,0.124980407962107,0.151649117541648,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0.255788742607303,0.431299245586727,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0,0.963438376446893,1.41696576325585,0.798169295285756,2.05116364240755,0.252071696221718,1.31398779682014,1.13032951942296,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.82731361184183,0,0,0,0,0,0.742913430802341,2.34323429584154,0.620060389503552,1.20490039368423,0.546974809018219,0,0.496211178389294,0.175871244359621,0,12.3211422252006,9.41594422212707,0,0,0.443511850813194,0,0,2.31097092121228,1.24968269769413,0,0,0.156986185701028,0.628462359664008,0,0,0,0,1.1436247068265,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0.223710863595585,0,0,0,0,2.3196288626764,0,0.233939463462106,0,0,0,2.08886981816315,0,6.01958433241968,3.93407208907123,0,0,0,1.17785080268967,0.594092800654172,0.4226557275834,0.169927114687817,0.0939839179798536,0.128915775947154,0,0,0,0,0,0.458729283404541,0.860037498908708,0.631086248772738,1.22384682343646,0.872701380680755,0.5290268405154,0,0,0,0,0,0.506794004045748,0,0,0,0,0,0,1.65833887891756,0.930896962757057,0,0.23806443146374,0,0.0620747142958579,0.112131862580613,0.12729431655633,0.404234377916439,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0.243947412259191,0.530119073285941,0.116193942869518,0.932949495138334,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0.719792448923265,1.20137223137567,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,1.27047312111232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0.616067160352178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0.848432591722276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0,0,0,0,1.20598527610407,0,0,0,0,0,0,2.6002644994473,0,0,0.173624994933292,4.42870692906919,0.482385754501632,3.05163472634166,0.442317039724898,0,0.438770794307945,0.21787692703798,0,0.0769502585037971,0,0.46112780877612,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0345239835768,1.22206028986725,0,0,0,1.55022605855557,0.802577647298789,1.1713222286267,0,0,0,0,1.20990716048664,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.219267951258557,0.0821154570532092,0.0969890164884194,0,0.90392296312213,0,0,1.7727022867646,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.410716136675979,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0.806201669840715,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,0.850493793212345,0,0.788057072991982,0.891727998294968,0,0,0.383830394638891,0.714695326373367,0,0.25426853765475,0,0,0,0,0,0,0,0,0,2.97350799631566,0.52893040697076,0,0,0.213574825135389,0.471612915298998,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,1.77213635993397,0.976210119215705,0.3755727921195,0.573409195690071,0.332787154610557,0.869349641179368,1.52183498429854,0.124980407962107,0.151649117541648,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0.255788742607303,0.431299245586727,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0,0.963438376446893,1.41696576325585,0.798169295285756,2.05116364240755,0.252071696221718,1.31398779682014,1.13032951942296,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.82731361184183,0,0,0,0,0,0.742913430802341,2.34323429584154,0.620060389503552,1.20490039368423,0.546974809018219,0,0.496211178389294,0.175871244359621,0,12.3211422252006,9.41594422212707,0,0,0.443511850813194,0,0,2.31097092121228,1.24968269769413,0,0,0.156986185701028,0.628462359664008,0,0,0,0,1.1436247068265,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0.223710863595585,0,0,0,0,2.3196288626764,0,0.233939463462106,0,0,0,2.08886981816315,0,6.01958433241968,3.93407208907123,0,0,0,1.17785080268967,0.594092800654172,0.4226557275834,0.169927114687817,0.0939839179798536,0.128915775947154,0,0,0,0,0,0.458729283404541,0.860037498908708,0.631086248772738,1.22384682343646,0.872701380680755,0.5290268405154,0,0,0,0,0,0.506794004045748,0,0,0,0,0,0,1.65833887891756,0.930896962757057,0,0.23806443146374,0,0.0620747142958579,0.112131862580613,0.12729431655633,0.404234377916439,0,0.342233301085281,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | ||
|short_description=p7@SEMA6D | |||
}} | }} |
Latest revision as of 21:30, 17 September 2015
Short description: | p7@SEMA6D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SEMA6D_5end |
Coexpression cluster: | NA |
Association with transcript: | -33bp_to_ENST00000536845_5end |
EntrezGene: | SEMA6D |
HGNC: | 16770 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data