FFCP PHASE1:Hg19::chr2:63816295..63816356,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4190 | |EntrezGene=4190 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6970 | |HGNC=6970 | ||
|TSSclassifier=strong | |||
|UniProt=C9JF79,F5H098,B7Z3I7,P40925,B4DUN2 | |UniProt=C9JF79,F5H098,B7Z3I7,P40925,B4DUN2 | ||
|association_with_transcript=10bp_to_,-10bp_to_ENST00000432309,ENST00000539945,NM_001199111,NM_001199112,uc010ypv.1,uc010ypw.1_5end | |association_with_transcript=10bp_to_,-10bp_to_ENST00000432309,ENST00000539945,NM_001199111,NM_001199112,uc010ypv.1,uc010ypw.1_5end | ||
|cluster_id=chr2:63816295..63816356,+ | |||
|coexpression_cluster_id=C4240 | |coexpression_cluster_id=C4240 | ||
|description=CAGE_peak_4_at_MDH1_5end | |description=CAGE_peak_4_at_MDH1_5end | ||
|id=chr2:63816295..63816356,+ | |id=chr2:63816295..63816356,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;9.09e-07;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.76e-11;82!UBERON:0006215;8.61e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.47e-19!69;UBERON:0006238!3.47e-19!69;UBERON:0001049!1.50e-18!57;UBERON:0005068!1.50e-18!57;UBERON:0006241!1.50e-18!57;UBERON:0007135!1.50e-18!57;UBERON:0002616!4.67e-18!59;UBERON:0001017!7.85e-18!82;UBERON:0002780!1.01e-16!41;UBERON:0001890!1.01e-16!41;UBERON:0006240!1.01e-16!41;UBERON:0005743!3.33e-16!86;UBERON:0003080!6.83e-16!42;UBERON:0003075!1.57e-15!86;UBERON:0007284!1.57e-15!86;UBERON:0007023!3.28e-14!115;UBERON:0002346!3.39e-14!90;UBERON:0002020!5.24e-14!34;UBERON:0003528!5.24e-14!34;UBERON:0001893!7.31e-14!34;UBERON:0001869!1.19e-13!32;UBERON:0000073!3.10e-13!94;UBERON:0001016!3.10e-13!94;UBERON:0002791!3.71e-13!33;UBERON:0000153!3.96e-12!129;UBERON:0007811!3.96e-12!129;UBERON:0000033!4.78e-12!123;UBERON:0003056!1.64e-10!61;UBERON:0004121!2.39e-10!169;UBERON:0002619!4.00e-10!22;UBERON:0000956!8.65e-10!25;UBERON:0000203!8.65e-10!25;UBERON:0000924!1.04e-09!173;UBERON:0006601!1.04e-09!173;UBERON:0001950!6.10e-09!20 | |ontology_enrichment_uberon=UBERON:0000955!3.47e-19!69;UBERON:0006238!3.47e-19!69;UBERON:0001049!1.50e-18!57;UBERON:0005068!1.50e-18!57;UBERON:0006241!1.50e-18!57;UBERON:0007135!1.50e-18!57;UBERON:0002616!4.67e-18!59;UBERON:0001017!7.85e-18!82;UBERON:0002780!1.01e-16!41;UBERON:0001890!1.01e-16!41;UBERON:0006240!1.01e-16!41;UBERON:0005743!3.33e-16!86;UBERON:0003080!6.83e-16!42;UBERON:0003075!1.57e-15!86;UBERON:0007284!1.57e-15!86;UBERON:0007023!3.28e-14!115;UBERON:0002346!3.39e-14!90;UBERON:0002020!5.24e-14!34;UBERON:0003528!5.24e-14!34;UBERON:0001893!7.31e-14!34;UBERON:0001869!1.19e-13!32;UBERON:0000073!3.10e-13!94;UBERON:0001016!3.10e-13!94;UBERON:0002791!3.71e-13!33;UBERON:0000153!3.96e-12!129;UBERON:0007811!3.96e-12!129;UBERON:0000033!4.78e-12!123;UBERON:0003056!1.64e-10!61;UBERON:0004121!2.39e-10!169;UBERON:0002619!4.00e-10!22;UBERON:0000956!8.65e-10!25;UBERON:0000203!8.65e-10!25;UBERON:0000924!1.04e-09!173;UBERON:0006601!1.04e-09!173;UBERON:0001950!6.10e-09!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.62e-31;22!UBERON:0001869;2.17e-30;32!UBERON:0003528;4.71e-30;34!UBERON:0002020;4.71e-30;34!UBERON:0001893;6.40e-28;34!UBERON:0002791;1.09e-27;32!UBERON:0001950;3.15e-27;20!UBERON:0000956;5.75e-27;25!UBERON:0000203;5.75e-27;25!UBERON:0000073;6.75e-23;53!UBERON:0002616;6.75e-23;53!UBERON:0002780;3.53e-22;41!UBERON:0001890;3.53e-22;41!UBERON:0000955;8.77e-16;68!UBERON:0000200;1.45e-15;6!UBERON:0001017;2.66e-14;75!UBERON:0007023;3.29e-13;114!UBERON:0004733;8.76e-12;12!UBERON:0002028;8.76e-12;12!UBERON:0004732;9.22e-11;13!UBERON:0001016;9.63e-11;83!UBERON:0002298;3.29e-10;6!UBERON:0002680;2.57e-09;9!UBERON:0001895;2.57e-09;9!UBERON:0000125;8.12e-09;9!UBERON:0002308;8.12e-09;9!UBERON:0001872;9.62e-09;5!UBERON:0001870;1.00e-08;3!UBERON:0002021;1.63e-08;5!UBERON:0000988;2.94e-08;3!UBERON:0000349;7.29e-08;5!UBERON:0004151;8.61e-08;3!UBERON:0007100;9.65e-08;25!UBERON:0003978;1.26e-07;3!UBERON:0000946;1.26e-07;3 | |||
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| ||
|short_description=p4@MDH1 | |short_description=p4@MDH1 | ||
}} | }} |
Latest revision as of 22:36, 17 September 2015
Short description: | p4@MDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MDH1_5end |
Coexpression cluster: | C4240_Dendritic_left_mature_heart_medial_occipital_Macrophage |
Association with transcript: | 10bp_to_, -10bp_to_ENST00000432309, ENST00000539945, NM_001199111, NM_001199112, uc010ypv.1, uc010ypw.1_5end |
EntrezGene: | MDH1 |
HGNC: | 6970 |
UniProt: | C9JF79F5H098B7Z3I7P40925B4DUN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data