FFCP PHASE1:Hg19::chr21:27423414..27423442,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=351 | |EntrezGene=351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=620 | |HGNC=620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_ENST00000415997_5end | |association_with_transcript=-66bp_to_ENST00000415997_5end | ||
|cluster_id=chr21:27423414..27423442,- | |||
|coexpression_cluster_id=C1073 | |||
|description=CAGE_peak_2_at_APP_5end | |description=CAGE_peak_2_at_APP_5end | ||
|id=chr21:27423414..27423442,- | |id=chr21:27423414..27423442,- | ||
|ontology_enrichment_celltype=CL:0000066!1.05e-08!254;CL:0000213!1.79e-07!57;CL:0000215!1.79e-07!57 | |ontology_enrichment_celltype=CL:0000066!1.05e-08!254;CL:0000213!1.79e-07!57;CL:0000215!1.79e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.93e-08,253;CL:0000213,1.53e-07,58;CL:0000215,1.53e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.02e-24!659;UBERON:0000467!8.82e-20!625;UBERON:0000480!2.25e-19!626;UBERON:0004111!7.81e-19!241;UBERON:0000922!1.42e-18!612;UBERON:0001049!9.84e-18!57;UBERON:0005068!9.84e-18!57;UBERON:0006241!9.84e-18!57;UBERON:0007135!9.84e-18!57;UBERON:0000477!5.03e-17!286;UBERON:0002050!1.41e-16!605;UBERON:0005423!1.41e-16!605;UBERON:0000923!2.72e-16!604;UBERON:0005291!2.72e-16!604;UBERON:0006598!2.72e-16!604;UBERON:0002532!2.72e-16!604;UBERON:0002780!4.04e-16!41;UBERON:0001890!4.04e-16!41;UBERON:0006240!4.04e-16!41;UBERON:0003080!2.00e-15!42;UBERON:0002020!6.96e-15!34;UBERON:0003528!6.96e-15!34;UBERON:0002616!9.11e-15!59;UBERON:0001017!3.44e-14!82;UBERON:0001893!3.68e-14!34;UBERON:0005743!3.84e-14!86;UBERON:0002791!5.90e-14!33;UBERON:0000062!9.49e-14!511;UBERON:0000924!1.14e-13!173;UBERON:0006601!1.14e-13!173;UBERON:0000025!1.23e-13!194;UBERON:0001869!1.37e-13!32;UBERON:0004121!3.77e-13!169;UBERON:0000073!3.87e-13!94;UBERON:0001016!3.87e-13!94;UBERON:0000955!6.46e-13!69;UBERON:0006238!6.46e-13!69;UBERON:0002346!1.02e-12!90;UBERON:0007023!2.22e-12!115;UBERON:0003075!3.14e-12!86;UBERON:0007284!3.14e-12!86;UBERON:0002619!1.06e-11!22;UBERON:0000483!1.22e-11!309;UBERON:0000119!1.73e-11!312;UBERON:0000033!2.26e-11!123;UBERON:0000956!1.00e-10!25;UBERON:0000203!1.00e-10!25;UBERON:0001950!1.33e-10!20;UBERON:0000153!3.20e-10!129;UBERON:0007811!3.20e-10!129;UBERON:0000481!1.06e-09!347;UBERON:0000475!1.32e-09!365;UBERON:0003056!1.32e-09!61;UBERON:0000064!7.88e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.38e-13;34!UBERON:0002020;3.38e-13;34!UBERON:0002791;3.44e-13;32!UBERON:0001869;6.41e-13;32!UBERON:0001893;1.24e-12;34!UBERON:0002780;2.67e-12;41!UBERON:0001890;2.67e-12;41!UBERON:0002619;5.15e-12;22!UBERON:0000956;4.01e-11;25!UBERON:0000203;4.01e-11;25!UBERON:0001950;6.75e-11;20!UBERON:0000073;3.15e-10;53!UBERON:0002616;3.15e-10;53!UBERON:0000955;4.01e-07;68!UBERON:0001017;5.53e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.49e-18,240;UBERON:0001049,1.65e-18,56;UBERON:0005068,1.65e-18,56;UBERON:0006241,1.65e-18,56;UBERON:0007135,1.65e-18,56;UBERON:0000073,3.78e-17,53;UBERON:0002616,3.78e-17,53;UBERON:0002780,2.96e-16,41;UBERON:0001890,2.96e-16,41;UBERON:0003080,2.96e-16,41;UBERON:0006240,2.96e-16,41;UBERON:0000922,2.46e-15,592;UBERON:0003528,5.24e-15,34;UBERON:0002020,5.24e-15,34;UBERON:0010371,1.74e-14,104;UBERON:0001017,1.75e-14,81;UBERON:0001893,2.81e-14,34;UBERON:0002346,4.52e-14,86;UBERON:0002791,4.82e-14,32;UBERON:0004121,5.51e-14,171;UBERON:0000924,5.51e-14,171;UBERON:0006601,5.51e-14,171;UBERON:0001869,1.06e-13,32;UBERON:0005423,1.34e-13,581;UBERON:0003075,1.39e-13,82;UBERON:0007284,1.39e-13,82;UBERON:0001016,1.87e-13,89;UBERON:0000025,2.74e-13,192;UBERON:0002050,3.16e-13,564;UBERON:0000955,3.28e-13,68;UBERON:0006238,3.28e-13,68;UBERON:0010314,9.03e-13,132;UBERON:0000923,1.20e-12,560;UBERON:0010316,1.20e-12,560;UBERON:0005291,1.20e-12,560;UBERON:0006598,1.20e-12,560;UBERON:0010317,1.20e-12,560;UBERON:0002532,1.20e-12,560;UBERON:0007023,8.06e-12,114;UBERON:0002619,8.52e-12,22;UBERON:0000483,2.12e-11,306;UBERON:0000119,3.00e-11,309;UBERON:0011216,6.62e-11,223;UBERON:0000956,8.24e-11,25;UBERON:0000203,8.24e-11,25;UBERON:0001950,1.10e-10,20;UBERON:0003056,1.99e-10,61 | |||
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| ||
|short_description=p2@APP | |short_description=p2@APP | ||
}} | }} |
Latest revision as of 23:01, 17 September 2015
Short description: | p2@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APP_5end |
Coexpression cluster: | C1073_olfactory_Prostate_Cardiac_medial_occipital_seminal_diencephalon |
Association with transcript: | -66bp_to_ENST00000415997_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.93e-08 | 253 |
lining cell | 1.53e-07 | 58 |
barrier cell | 1.53e-07 | 58 |