FFCP PHASE1:Hg19::chr2:175712494..175712503,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1123 | |EntrezGene=1123 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1943 | |HGNC=1943 | ||
|TSSclassifier=strong | |||
|UniProt=C9JR98 | |UniProt=C9JR98 | ||
|association_with_transcript=-15bp_to_ENST00000443238_5end | |association_with_transcript=-15bp_to_ENST00000443238_5end | ||
|cluster_id=chr2:175712494..175712503,- | |||
|description=CAGE_peak_12_at_CHN1_5end | |description=CAGE_peak_12_at_CHN1_5end | ||
|id=chr2:175712494..175712503,- | |id=chr2:175712494..175712503,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000228;9.38e-08;1!CL:0002372;9.38e-08;1 | |ontology_enrichment_celltype_v019=CL:0000228;9.38e-08;1!CL:0002372;9.38e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000228,8.51e-08,1;CL:0002372,8.51e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.63e-09;3!UBERON:0005425;9.38e-08;1 | |ontology_enrichment_development_v019=UBERON:0003056;1.63e-09;3!UBERON:0005425;9.38e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;2.79e-08;1!DOID:4549;2.79e-08;1!DOID:5861;2.79e-08;1!DOID:6496;2.79e-08;1!DOID:3347;9.38e-08;1 | |ontology_enrichment_disease_v019=DOID:3371;2.79e-08;1!DOID:4549;2.79e-08;1!DOID:5861;2.79e-08;1!DOID:6496;2.79e-08;1!DOID:3347;9.38e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,2.70e-08,1;DOID:4549,2.70e-08,1;DOID:5861,2.70e-08,1;DOID:6496,2.70e-08,1;DOID:3347,1.11e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.29e-19!82;UBERON:0000073!4.91e-19!94;UBERON:0001016!4.91e-19!94;UBERON:0005743!2.68e-18!86;UBERON:0003080!2.04e-16!42;UBERON:0001049!2.50e-16!57;UBERON:0005068!2.50e-16!57;UBERON:0006241!2.50e-16!57;UBERON:0007135!2.50e-16!57;UBERON:0007023!4.48e-16!115;UBERON:0002780!8.71e-16!41;UBERON:0001890!8.71e-16!41;UBERON:0006240!8.71e-16!41;UBERON:0000955!7.80e-15!69;UBERON:0006238!7.80e-15!69;UBERON:0002020!1.60e-14!34;UBERON:0003528!1.60e-14!34;UBERON:0001893!3.79e-14!34;UBERON:0002791!1.02e-13!33;UBERON:0002616!1.59e-13!59;UBERON:0001869!2.22e-13!32;UBERON:0002346!1.50e-12!90;UBERON:0003056!4.11e-12!61;UBERON:0003075!7.47e-12!86;UBERON:0007284!7.47e-12!86;UBERON:0000924!1.74e-11!173;UBERON:0006601!1.74e-11!173;UBERON:0004121!7.57e-11!169;UBERON:0000956!1.10e-10!25;UBERON:0000203!1.10e-10!25;UBERON:0000153!1.71e-09!129;UBERON:0007811!1.71e-09!129;UBERON:0000033!2.18e-09!123;UBERON:0001950!7.18e-09!20;UBERON:0002619!1.08e-08!22;UBERON:0000475!9.43e-07!365 | |ontology_enrichment_uberon=UBERON:0001017!2.29e-19!82;UBERON:0000073!4.91e-19!94;UBERON:0001016!4.91e-19!94;UBERON:0005743!2.68e-18!86;UBERON:0003080!2.04e-16!42;UBERON:0001049!2.50e-16!57;UBERON:0005068!2.50e-16!57;UBERON:0006241!2.50e-16!57;UBERON:0007135!2.50e-16!57;UBERON:0007023!4.48e-16!115;UBERON:0002780!8.71e-16!41;UBERON:0001890!8.71e-16!41;UBERON:0006240!8.71e-16!41;UBERON:0000955!7.80e-15!69;UBERON:0006238!7.80e-15!69;UBERON:0002020!1.60e-14!34;UBERON:0003528!1.60e-14!34;UBERON:0001893!3.79e-14!34;UBERON:0002791!1.02e-13!33;UBERON:0002616!1.59e-13!59;UBERON:0001869!2.22e-13!32;UBERON:0002346!1.50e-12!90;UBERON:0003056!4.11e-12!61;UBERON:0003075!7.47e-12!86;UBERON:0007284!7.47e-12!86;UBERON:0000924!1.74e-11!173;UBERON:0006601!1.74e-11!173;UBERON:0004121!7.57e-11!169;UBERON:0000956!1.10e-10!25;UBERON:0000203!1.10e-10!25;UBERON:0000153!1.71e-09!129;UBERON:0007811!1.71e-09!129;UBERON:0000033!2.18e-09!123;UBERON:0001950!7.18e-09!20;UBERON:0002619!1.08e-08!22;UBERON:0000475!9.43e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;8.01e-14;2!UBERON:0000956;1.79e-11;25!UBERON:0000203;1.79e-11;25!UBERON:0001950;1.28e-10;20!UBERON:0002114;8.87e-10;2!UBERON:0002619;1.19e-09;22!UBERON:0002780;5.30e-09;41!UBERON:0001890;5.30e-09;41!UBERON:0001871;8.24e-09;6!UBERON:0001893;5.38e-08;34!UBERON:0002791;7.10e-08;32!UBERON:0001869;7.82e-08;32!UBERON:0005795;9.38e-08;1!UBERON:0000941;9.38e-08;1!UBERON:0001785;9.38e-08;1!UBERON:0002464;9.38e-08;1!UBERON:0004904;9.38e-08;1!UBERON:0002426;9.38e-08;1!UBERON:0003831;9.38e-08;1!UBERON:0003898;9.38e-08;1!UBERON:0004830;9.38e-08;1!UBERON:0001021;9.38e-08;1!UBERON:0003830;9.38e-08;1!UBERON:0005175;9.38e-08;1!UBERON:0001774;9.38e-08;1!UBERON:0001103;9.38e-08;1!UBERON:0003528;1.39e-07;34!UBERON:0002020;1.39e-07;34!UBERON:0000073;1.49e-07;53!UBERON:0002616;1.49e-07;53!UBERON:0000922;1.66e-07;49!UBERON:0003296;2.42e-07;4!UBERON:0010133;2.42e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000007;8.01e-14;2!UBERON:0000956;1.79e-11;25!UBERON:0000203;1.79e-11;25!UBERON:0001950;1.28e-10;20!UBERON:0002114;8.87e-10;2!UBERON:0002619;1.19e-09;22!UBERON:0002780;5.30e-09;41!UBERON:0001890;5.30e-09;41!UBERON:0001871;8.24e-09;6!UBERON:0001893;5.38e-08;34!UBERON:0002791;7.10e-08;32!UBERON:0001869;7.82e-08;32!UBERON:0005795;9.38e-08;1!UBERON:0000941;9.38e-08;1!UBERON:0001785;9.38e-08;1!UBERON:0002464;9.38e-08;1!UBERON:0004904;9.38e-08;1!UBERON:0002426;9.38e-08;1!UBERON:0003831;9.38e-08;1!UBERON:0003898;9.38e-08;1!UBERON:0004830;9.38e-08;1!UBERON:0001021;9.38e-08;1!UBERON:0003830;9.38e-08;1!UBERON:0005175;9.38e-08;1!UBERON:0001774;9.38e-08;1!UBERON:0001103;9.38e-08;1!UBERON:0003528;1.39e-07;34!UBERON:0002020;1.39e-07;34!UBERON:0000073;1.49e-07;53!UBERON:0002616;1.49e-07;53!UBERON:0000922;1.66e-07;49!UBERON:0003296;2.42e-07;4!UBERON:0010133;2.42e-07;4 | ||
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| ||
|short_description=p12@CHN1 | |short_description=p12@CHN1 | ||
}} | }} |
Latest revision as of 08:08, 18 September 2015
Short description: | p12@CHN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CHN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000443238_5end |
EntrezGene: | CHN1 |
HGNC: | 1943 |
UniProt: | C9JR98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 8.51e-08 | 1 |
myotube | 8.51e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.70e-08 | 1 |
extraosseous chondrosarcoma | 2.70e-08 | 1 |
myxoid chondrosarcoma | 2.70e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 2.70e-08 | 1 |
osteosarcoma | 1.11e-07 | 1 |