FFCP PHASE1:Hg19::chr12:45269964..45269979,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4753 | |EntrezGene=4753 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7751 | |HGNC=7751 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=89bp_to_ENST00000546415_5end | |association_with_transcript=89bp_to_ENST00000546415_5end | ||
|cluster_id=chr12:45269964..45269979,- | |||
|coexpression_cluster_id=C1015 | |||
|description=CAGE_peak_2_at_NELL2_5end | |description=CAGE_peak_2_at_NELL2_5end | ||
|id=chr12:45269964..45269979,- | |id=chr12:45269964..45269979,- | ||
|ontology_enrichment_celltype=CL:0000791!1.60e-12!18;CL:0000789!1.60e-12!18;CL:0002420!1.60e-12!18;CL:0002419!1.60e-12!18;CL:0000790!1.60e-12!18;CL:0000625!4.97e-12!11;CL:0000084!1.04e-07!25;CL:0000827!1.04e-07!25;CL:0000540!5.45e-07!6;CL:0000031!5.45e-07!6;CL:0000404!5.45e-07!6;CL:0000047!6.73e-07!8 | |ontology_enrichment_celltype=CL:0000791!1.60e-12!18;CL:0000789!1.60e-12!18;CL:0002420!1.60e-12!18;CL:0002419!1.60e-12!18;CL:0000790!1.60e-12!18;CL:0000625!4.97e-12!11;CL:0000084!1.04e-07!25;CL:0000827!1.04e-07!25;CL:0000540!5.45e-07!6;CL:0000031!5.45e-07!6;CL:0000404!5.45e-07!6;CL:0000047!6.73e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.12e-18;18!CL:0000789;4.12e-18;18!CL:0002419;4.12e-18;18!CL:0000625;8.48e-17;11!CL:0000084;6.55e-12;25!CL:0000540;1.94e-07;6!CL:0000404;1.94e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.59e-18,18;CL:0000789,1.59e-18,18;CL:0002420,1.59e-18,18;CL:0002419,1.59e-18,18;CL:0000790,1.59e-18,18;CL:0000625,4.09e-17,11;CL:0000084,3.44e-12,25;CL:0000827,3.44e-12,25;CL:0000047,1.07e-07,8;CL:0000540,2.52e-07,6;CL:0000031,2.52e-07,6;CL:0000404,2.52e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;4.12e-18;18!UBERON:0006601;6.37e-11;82!CL:0000031;1.94e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.17e-44!94;UBERON:0001016!1.17e-44!94;UBERON:0005743!2.59e-43!86;UBERON:0001049!8.27e-41!57;UBERON:0005068!8.27e-41!57;UBERON:0006241!8.27e-41!57;UBERON:0007135!8.27e-41!57;UBERON:0001017!1.89e-40!82;UBERON:0002346!4.03e-37!90;UBERON:0002616!2.47e-35!59;UBERON:0002780!2.92e-35!41;UBERON:0001890!2.92e-35!41;UBERON:0006240!2.92e-35!41;UBERON:0003080!4.33e-34!42;UBERON:0003075!7.67e-34!86;UBERON:0007284!7.67e-34!86;UBERON:0000955!1.09e-33!69;UBERON:0006238!1.09e-33!69;UBERON:0001869!3.37e-32!32;UBERON:0001893!1.07e-31!34;UBERON:0002020!2.31e-31!34;UBERON:0003528!2.31e-31!34;UBERON:0003056!1.40e-30!61;UBERON:0002791!1.51e-30!33;UBERON:0007023!1.75e-30!115;UBERON:0002619!3.15e-28!22;UBERON:0000924!2.15e-27!173;UBERON:0006601!2.15e-27!173;UBERON:0001950!8.41e-26!20;UBERON:0000956!1.31e-25!25;UBERON:0000203!1.31e-25!25;UBERON:0004121!7.64e-25!169;UBERON:0000153!1.90e-24!129;UBERON:0007811!1.90e-24!129;UBERON:0000033!4.33e-23!123;UBERON:0001871!1.65e-10!7;UBERON:0000200!1.92e-08!6;UBERON:0004732!3.22e-08!13;UBERON:0003076!4.03e-08!15;UBERON:0003057!4.03e-08!15;UBERON:0002420!5.15e-08!9;UBERON:0007245!5.15e-08!9;UBERON:0010009!5.15e-08!9;UBERON:0010011!5.15e-08!9;UBERON:0000454!5.15e-08!9;UBERON:0002021!1.57e-07!5;UBERON:0000349!1.80e-07!5;UBERON:0004733!1.87e-07!12;UBERON:0002028!1.87e-07!12;UBERON:0007277!1.87e-07!12;UBERON:0001872!2.10e-07!5;UBERON:0002308!2.60e-07!9;UBERON:0000125!2.60e-07!9;UBERON:0000064!5.63e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.87e-41;22!UBERON:0001869;1.79e-38;32!UBERON:0001950;1.15e-37;20!UBERON:0003528;9.94e-37;34!UBERON:0002020;9.94e-37;34!UBERON:0001893;1.75e-36;34!UBERON:0002791;8.04e-36;32!UBERON:0000956;1.39e-35;25!UBERON:0000203;1.39e-35;25!UBERON:0002780;1.62e-31;41!UBERON:0001890;1.62e-31;41!UBERON:0000073;1.11e-25;53!UBERON:0002616;1.11e-25;53!UBERON:0000955;4.72e-20;68!UBERON:0001017;3.41e-19;75!UBERON:0001016;1.88e-16;83!UBERON:0001871;2.39e-13;6!UBERON:0000200;9.44e-12;6!UBERON:0002021;1.88e-10;5!UBERON:0000349;2.50e-10;5!UBERON:0001872;2.99e-10;5!UBERON:0002420;3.65e-09;9!UBERON:0007245;3.65e-09;9!UBERON:0010009;3.65e-09;9!UBERON:0010011;3.65e-09;9!UBERON:0000454;3.65e-09;9!UBERON:0000125;3.21e-08;9!UBERON:0002308;3.21e-08;9!UBERON:0007023;1.75e-07;114!UBERON:0000369;1.88e-07;4!UBERON:0002435;1.88e-07;4!UBERON:0000204;1.88e-07;4!UBERON:0002298;7.77e-07;6!UBERON:0004732;8.56e-07;13!UBERON:0001870;9.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.88e-50,89;UBERON:0001017,2.71e-48,81;UBERON:0000073,9.29e-47,53;UBERON:0002616,9.29e-47,53;UBERON:0001049,6.09e-46,56;UBERON:0005068,6.09e-46,56;UBERON:0006241,6.09e-46,56;UBERON:0007135,6.09e-46,56;UBERON:0002780,2.05e-43,41;UBERON:0001890,2.05e-43,41;UBERON:0003080,2.05e-43,41;UBERON:0006240,2.05e-43,41;UBERON:0001869,1.04e-42,32;UBERON:0001893,2.24e-42,34;UBERON:0003528,6.72e-42,34;UBERON:0002020,6.72e-42,34;UBERON:0000955,2.29e-41,68;UBERON:0006238,2.29e-41,68;UBERON:0002619,2.90e-41,22;UBERON:0002791,1.81e-39,32;UBERON:0001950,1.21e-37,20;UBERON:0000956,1.41e-35,25;UBERON:0000203,1.41e-35,25;UBERON:0002346,2.55e-33,86;UBERON:0003075,2.14e-30,82;UBERON:0007284,2.14e-30,82;UBERON:0003056,3.28e-29,61;UBERON:0004121,2.31e-24,171;UBERON:0000924,2.31e-24,171;UBERON:0006601,2.31e-24,171;UBERON:0010371,7.71e-24,104;UBERON:0007023,1.54e-20,114;UBERON:0011216,3.01e-18,223;UBERON:0010314,4.27e-15,132;UBERON:0001871,2.89e-13,6;UBERON:0000200,8.65e-12,6;UBERON:0002021,1.95e-10,5;UBERON:0000349,2.40e-10,5;UBERON:0001872,3.00e-10,5;UBERON:0002420,4.32e-09,9;UBERON:0007245,4.32e-09,9;UBERON:0010009,4.32e-09,9;UBERON:0010011,4.32e-09,9;UBERON:0000454,4.32e-09,9;UBERON:0000125,3.62e-08,9;UBERON:0002308,3.62e-08,9;UBERON:0000025,1.68e-07,192;UBERON:0000369,1.99e-07,4;UBERON:0002435,1.99e-07,4;UBERON:0000204,1.99e-07,4;UBERON:0010082,1.99e-07,4;UBERON:0002298,7.89e-07,6;UBERON:0001870,8.51e-07,3;UBERON:0004732,8.58e-07,13 | |||
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| ||
|short_description=p2@NELL2 | |short_description=p2@NELL2 | ||
}} | }} |
Latest revision as of 09:34, 18 September 2015
Short description: | p2@NELL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NELL2_5end |
Coexpression cluster: | C1015_occipital_neuroectodermal_temporal_parietal_duodenum_brain_small |
Association with transcript: | 89bp_to_ENST00000546415_5end |
EntrezGene: | NELL2 |
HGNC: | 7751 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.59e-18 | 18 |
alpha-beta T cell | 1.59e-18 | 18 |
immature T cell | 1.59e-18 | 18 |
mature T cell | 1.59e-18 | 18 |
immature alpha-beta T cell | 1.59e-18 | 18 |
CD8-positive, alpha-beta T cell | 4.09e-17 | 11 |
T cell | 3.44e-12 | 25 |
pro-T cell | 3.44e-12 | 25 |
neuronal stem cell | 1.07e-07 | 8 |
neuron | 2.52e-07 | 6 |
neuroblast | 2.52e-07 | 6 |
electrically signaling cell | 2.52e-07 | 6 |