FFCP PHASE1:Hg19::chr19:44174310..44174329,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5329 | |EntrezGene=5329 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9053 | |HGNC=9053 | ||
|TSSclassifier=strong | |||
|UniProt=Q03405 | |UniProt=Q03405 | ||
|association_with_transcript=168bp_to_NM_001005376,NM_001005377,NM_002659_5end | |association_with_transcript=168bp_to_NM_001005376,NM_001005377,NM_002659_5end | ||
|cluster_id=chr19:44174310..44174329,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_PLAUR_5end | |description=CAGE_peak_1_at_PLAUR_5end | ||
|id=chr19:44174310..44174329,- | |id=chr19:44174310..44174329,- | ||
|ontology_enrichment_celltype=CL:0000766!1.95e-32!76;CL:0002371!4.89e-29!591;CL:0002009!9.71e-29!65;CL:0000557!1.30e-28!71;CL:0002194!1.51e-27!63;CL:0000576!1.51e-27!63;CL:0000040!1.51e-27!63;CL:0000559!1.51e-27!63;CL:0000144!4.09e-27!625;CL:0000012!9.12e-27!682;CL:0002057!3.99e-26!42;CL:0000548!6.39e-26!679;CL:0000004!6.39e-26!679;CL:0000255!6.39e-26!679;CL:0000839!4.08e-25!70;CL:0000860!1.75e-24!45;CL:0000048!5.10e-23!430;CL:0000723!3.03e-22!436;CL:0000034!5.99e-21!444;CL:0000003!1.86e-19!722;CL:0000763!1.92e-16!112;CL:0000049!1.92e-16!112;CL:0000063!1.92e-15!578;CL:0000222!4.88e-14!119;CL:0002320!5.81e-14!365;CL:0000134!1.10e-13!358;CL:0000192!1.17e-12!42;CL:0000514!1.17e-12!42;CL:0000183!1.29e-12!59;CL:0000359!1.50e-12!32;CL:0000680!4.87e-12!57;CL:0000056!4.87e-12!57;CL:0000355!4.87e-12!57;CL:0000187!1.29e-11!54;CL:0000055!1.28e-10!180;CL:0000219!3.52e-09!390;CL:0000393!2.69e-08!60;CL:0000211!2.69e-08!60 | |ontology_enrichment_celltype=CL:0000766!1.95e-32!76;CL:0002371!4.89e-29!591;CL:0002009!9.71e-29!65;CL:0000557!1.30e-28!71;CL:0002194!1.51e-27!63;CL:0000576!1.51e-27!63;CL:0000040!1.51e-27!63;CL:0000559!1.51e-27!63;CL:0000144!4.09e-27!625;CL:0000012!9.12e-27!682;CL:0002057!3.99e-26!42;CL:0000548!6.39e-26!679;CL:0000004!6.39e-26!679;CL:0000255!6.39e-26!679;CL:0000839!4.08e-25!70;CL:0000860!1.75e-24!45;CL:0000048!5.10e-23!430;CL:0000723!3.03e-22!436;CL:0000034!5.99e-21!444;CL:0000003!1.86e-19!722;CL:0000763!1.92e-16!112;CL:0000049!1.92e-16!112;CL:0000063!1.92e-15!578;CL:0000222!4.88e-14!119;CL:0002320!5.81e-14!365;CL:0000134!1.10e-13!358;CL:0000192!1.17e-12!42;CL:0000514!1.17e-12!42;CL:0000183!1.29e-12!59;CL:0000359!1.50e-12!32;CL:0000680!4.87e-12!57;CL:0000056!4.87e-12!57;CL:0000355!4.87e-12!57;CL:0000187!1.29e-11!54;CL:0000055!1.28e-10!180;CL:0000219!3.52e-09!390;CL:0000393!2.69e-08!60;CL:0000211!2.69e-08!60 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.07e-19;33!CL:0002057;1.07e-19;33!CL:0000473;3.02e-19;39!CL:0000234;3.02e-19;39!CL:0000576;3.37e-15;48!CL:0000766;1.59e-14;69!CL:0000359;7.26e-12;32!CL:0000192;4.31e-09;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.12e-33,72;CL:0002009,4.74e-30,61;CL:0000557,8.91e-30,67;CL:0000473,1.65e-29,48;CL:0000234,1.65e-29,48;CL:0002194,7.63e-29,59;CL:0000576,7.63e-29,59;CL:0000040,7.63e-29,59;CL:0000559,7.63e-29,59;CL:0000860,3.74e-26,42;CL:0002057,3.74e-26,42;CL:0000839,4.79e-26,66;CL:0000048,6.49e-23,427;CL:0000723,3.38e-22,433;CL:0000034,7.71e-21,441;CL:0000763,1.74e-16,108;CL:0000049,1.74e-16,108;CL:0000222,4.52e-14,121;CL:0002320,5.87e-14,361;CL:0000134,1.10e-13,354;CL:0000359,1.46e-12,32;CL:0000192,2.48e-12,43;CL:0000514,2.48e-12,43;CL:0000680,8.42e-12,58;CL:0000056,8.42e-12,58;CL:0000355,8.42e-12,58;CL:0000187,2.25e-11,55;CL:0000219,2.99e-09,386;CL:0000393,4.22e-08,61;CL:0000211,4.22e-08,61;CL:0000057,7.21e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002057;5.24e-19;42!CL:0000514;4.31e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.73e-36!216;UBERON:0002204!2.58e-33!167;UBERON:0002371!2.77e-27!80;UBERON:0000926!1.58e-26!448;UBERON:0004120!1.58e-26!448;UBERON:0006603!1.58e-26!448;UBERON:0001474!7.68e-25!86;UBERON:0004765!3.25e-23!101;UBERON:0001434!3.25e-23!101;UBERON:0002390!1.92e-22!102;UBERON:0003061!1.92e-22!102;UBERON:0002193!4.43e-21!112;UBERON:0002405!7.10e-15!115;UBERON:0001637!4.29e-14!42;UBERON:0003509!4.29e-14!42;UBERON:0004572!4.29e-14!42;UBERON:0004535!1.91e-13!110;UBERON:0002049!2.31e-13!79;UBERON:0007798!2.31e-13!79;UBERON:0002384!2.42e-13!375;UBERON:0001981!8.48e-13!60;UBERON:0007500!8.48e-13!60;UBERON:0004537!8.48e-13!60;UBERON:0006965!8.48e-13!60;UBERON:0001009!1.26e-12!113;UBERON:0000467!6.75e-12!625;UBERON:0004290!7.09e-12!70;UBERON:0000914!7.12e-12!83;UBERON:0002329!7.12e-12!83;UBERON:0003077!7.12e-12!83;UBERON:0003059!7.12e-12!83;UBERON:0007282!7.12e-12!83;UBERON:0009618!7.12e-12!83;UBERON:0007285!7.12e-12!83;UBERON:0000055!8.55e-12!69;UBERON:0000480!1.04e-11!626;UBERON:0000486!1.60e-11!82;UBERON:0004573!1.90e-11!33;UBERON:0004571!1.90e-11!33;UBERON:0004872!1.91e-10!84;UBERON:0003914!2.10e-10!118;UBERON:0001134!5.09e-10!61;UBERON:0002036!5.09e-10!61;UBERON:0003082!5.09e-10!61;UBERON:0005256!5.83e-10!143;UBERON:0002385!2.77e-09!63;UBERON:0001015!2.77e-09!63;UBERON:0000383!2.77e-09!63;UBERON:0000923!1.56e-08!604;UBERON:0005291!1.56e-08!604;UBERON:0006598!1.56e-08!604;UBERON:0002532!1.56e-08!604;UBERON:0000468!1.57e-08!659;UBERON:0002050!2.11e-08!605;UBERON:0005423!2.11e-08!605;UBERON:0000479!9.55e-08!787;UBERON:0000922!4.25e-07!612;UBERON:0000490!8.86e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.48e-10;33!UBERON:0004571;1.48e-10;33!UBERON:0001637;1.89e-10;42!UBERON:0003509;1.89e-10;42!UBERON:0004572;1.89e-10;42!UBERON:0007500;1.44e-07;56!UBERON:0001981;1.44e-07;56!UBERON:0004537;1.44e-07;56!UBERON:0003914;2.34e-07;74 | |||
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| ||
|short_description=p1@PLAUR | |short_description=p1@PLAUR | ||
}} | }} |
Latest revision as of 11:55, 18 September 2015
Short description: | p1@PLAUR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLAUR_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 168bp_to_NM_001005376, NM_001005377, NM_002659_5end |
EntrezGene: | PLAUR |
HGNC: | 9053 |
UniProt: | Q03405 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.12e-33 | 72 |
macrophage dendritic cell progenitor | 4.74e-30 | 61 |
granulocyte monocyte progenitor cell | 8.91e-30 | 67 |
defensive cell | 1.65e-29 | 48 |
phagocyte | 1.65e-29 | 48 |
monopoietic cell | 7.63e-29 | 59 |
monocyte | 7.63e-29 | 59 |
monoblast | 7.63e-29 | 59 |
promonocyte | 7.63e-29 | 59 |
classical monocyte | 3.74e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.74e-26 | 42 |
myeloid lineage restricted progenitor cell | 4.79e-26 | 66 |
multi fate stem cell | 6.49e-23 | 427 |
somatic stem cell | 3.38e-22 | 433 |
stem cell | 7.71e-21 | 441 |
myeloid cell | 1.74e-16 | 108 |
common myeloid progenitor | 1.74e-16 | 108 |
mesodermal cell | 4.52e-14 | 121 |
connective tissue cell | 5.87e-14 | 361 |
mesenchymal cell | 1.10e-13 | 354 |
vascular associated smooth muscle cell | 1.46e-12 | 32 |
smooth muscle cell | 2.48e-12 | 43 |
smooth muscle myoblast | 2.48e-12 | 43 |
muscle precursor cell | 8.42e-12 | 58 |
myoblast | 8.42e-12 | 58 |
multi-potent skeletal muscle stem cell | 8.42e-12 | 58 |
muscle cell | 2.25e-11 | 55 |
motile cell | 2.99e-09 | 386 |
electrically responsive cell | 4.22e-08 | 61 |
electrically active cell | 4.22e-08 | 61 |
fibroblast | 7.21e-07 | 76 |