FFCP PHASE1:Hg19::chr8:56015008..56015048,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114786 | |EntrezGene=114786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29394 | |HGNC=29394 | ||
|TSSclassifier=strong | |||
|UniProt=Q5GH76 | |UniProt=Q5GH76 | ||
|association_with_transcript=0bp_to_ENST00000543752,NM_052898,uc003xsf.2_5end | |association_with_transcript=0bp_to_ENST00000543752,NM_052898,uc003xsf.2_5end | ||
|cluster_id=chr8:56015008..56015048,+ | |||
|coexpression_cluster_id=C1977 | |coexpression_cluster_id=C1977 | ||
|description=CAGE_peak_3_at_XKR4_5end | |description=CAGE_peak_3_at_XKR4_5end | ||
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|ontology_enrichment_celltype=CL:0000064!5.82e-09!3;CL:0005012!5.82e-09!3;CL:0000067!5.82e-09!3;CL:0002304!5.82e-09!3 | |ontology_enrichment_celltype=CL:0000064!5.82e-09!3;CL:0005012!5.82e-09!3;CL:0000067!5.82e-09!3;CL:0002304!5.82e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002553;2.17e-10;1 | |ontology_enrichment_celltype_v019=CL:0002553;2.17e-10;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.57e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.82e-08;82 | |ontology_enrichment_development_v019=UBERON:0006601;3.82e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.17e-57!90;UBERON:0001017!8.12e-55!82;UBERON:0005743!1.86e-54!86;UBERON:0003075!5.02e-52!86;UBERON:0007284!5.02e-52!86;UBERON:0001049!1.18e-51!57;UBERON:0005068!1.18e-51!57;UBERON:0006241!1.18e-51!57;UBERON:0007135!1.18e-51!57;UBERON:0000073!5.79e-51!94;UBERON:0001016!5.79e-51!94;UBERON:0003056!6.95e-48!61;UBERON:0002780!1.57e-47!41;UBERON:0001890!1.57e-47!41;UBERON:0006240!1.57e-47!41;UBERON:0002619!8.14e-47!22;UBERON:0001950!1.21e-46!20;UBERON:0002616!2.41e-46!59;UBERON:0003080!3.11e-46!42;UBERON:0000955!5.47e-46!69;UBERON:0006238!5.47e-46!69;UBERON:0001869!1.89e-45!32;UBERON:0001893!1.90e-42!34;UBERON:0000956!9.74e-41!25;UBERON:0000203!9.74e-41!25;UBERON:0002791!5.29e-40!33;UBERON:0000924!6.53e-39!173;UBERON:0006601!6.53e-39!173;UBERON:0002020!1.15e-38!34;UBERON:0003528!1.15e-38!34;UBERON:0000153!7.33e-38!129;UBERON:0007811!7.33e-38!129;UBERON:0000033!1.47e-36!123;UBERON:0004121!5.17e-35!169;UBERON:0007023!3.69e-32!115;UBERON:0001871!1.01e-17!7;UBERON:0000200!1.89e-17!6;UBERON:0001872!2.08e-14!5;UBERON:0000064!2.12e-13!219;UBERON:0000488!4.03e-11!4;UBERON:0000025!2.12e-10!194;UBERON:0000483!2.51e-10!309;UBERON:0000119!4.09e-10!312;UBERON:0000475!5.02e-10!365;UBERON:0000349!7.92e-10!5;UBERON:0002021!8.48e-10!5;UBERON:0002771!1.55e-09!3;UBERON:0000481!5.49e-09!347;UBERON:0001778!5.82e-09!3;UBERON:0001775!5.82e-09!3;UBERON:0000923!1.20e-08!604;UBERON:0005291!1.20e-08!604;UBERON:0006598!1.20e-08!604;UBERON:0002532!1.20e-08!604;UBERON:0002050!1.31e-08!605;UBERON:0005423!1.31e-08!605;UBERON:0000477!1.33e-08!286;UBERON:0000922!2.51e-08!612;UBERON:0007625!2.98e-08!11;UBERON:0002420!6.97e-08!9;UBERON:0007245!6.97e-08!9;UBERON:0010009!6.97e-08!9;UBERON:0010011!6.97e-08!9;UBERON:0000454!6.97e-08!9;UBERON:0000062!8.87e-08!511;UBERON:0003076!9.74e-08!15;UBERON:0003057!9.74e-08!15;UBERON:0002203!2.03e-07!6;UBERON:0001768!2.03e-07!6;UBERON:0004111!3.00e-07!241;UBERON:0004733!3.65e-07!12;UBERON:0002028!3.65e-07!12;UBERON:0007277!3.65e-07!12;UBERON:0001870!4.79e-07!2;UBERON:0001876!5.23e-07!2;UBERON:0000369!5.58e-07!4;UBERON:0002435!5.58e-07!4;UBERON:0000204!5.58e-07!4;UBERON:0010082!5.58e-07!4;UBERON:0000007!5.71e-07!2 | |ontology_enrichment_uberon=UBERON:0002346!3.17e-57!90;UBERON:0001017!8.12e-55!82;UBERON:0005743!1.86e-54!86;UBERON:0003075!5.02e-52!86;UBERON:0007284!5.02e-52!86;UBERON:0001049!1.18e-51!57;UBERON:0005068!1.18e-51!57;UBERON:0006241!1.18e-51!57;UBERON:0007135!1.18e-51!57;UBERON:0000073!5.79e-51!94;UBERON:0001016!5.79e-51!94;UBERON:0003056!6.95e-48!61;UBERON:0002780!1.57e-47!41;UBERON:0001890!1.57e-47!41;UBERON:0006240!1.57e-47!41;UBERON:0002619!8.14e-47!22;UBERON:0001950!1.21e-46!20;UBERON:0002616!2.41e-46!59;UBERON:0003080!3.11e-46!42;UBERON:0000955!5.47e-46!69;UBERON:0006238!5.47e-46!69;UBERON:0001869!1.89e-45!32;UBERON:0001893!1.90e-42!34;UBERON:0000956!9.74e-41!25;UBERON:0000203!9.74e-41!25;UBERON:0002791!5.29e-40!33;UBERON:0000924!6.53e-39!173;UBERON:0006601!6.53e-39!173;UBERON:0002020!1.15e-38!34;UBERON:0003528!1.15e-38!34;UBERON:0000153!7.33e-38!129;UBERON:0007811!7.33e-38!129;UBERON:0000033!1.47e-36!123;UBERON:0004121!5.17e-35!169;UBERON:0007023!3.69e-32!115;UBERON:0001871!1.01e-17!7;UBERON:0000200!1.89e-17!6;UBERON:0001872!2.08e-14!5;UBERON:0000064!2.12e-13!219;UBERON:0000488!4.03e-11!4;UBERON:0000025!2.12e-10!194;UBERON:0000483!2.51e-10!309;UBERON:0000119!4.09e-10!312;UBERON:0000475!5.02e-10!365;UBERON:0000349!7.92e-10!5;UBERON:0002021!8.48e-10!5;UBERON:0002771!1.55e-09!3;UBERON:0000481!5.49e-09!347;UBERON:0001778!5.82e-09!3;UBERON:0001775!5.82e-09!3;UBERON:0000923!1.20e-08!604;UBERON:0005291!1.20e-08!604;UBERON:0006598!1.20e-08!604;UBERON:0002532!1.20e-08!604;UBERON:0002050!1.31e-08!605;UBERON:0005423!1.31e-08!605;UBERON:0000477!1.33e-08!286;UBERON:0000922!2.51e-08!612;UBERON:0007625!2.98e-08!11;UBERON:0002420!6.97e-08!9;UBERON:0007245!6.97e-08!9;UBERON:0010009!6.97e-08!9;UBERON:0010011!6.97e-08!9;UBERON:0000454!6.97e-08!9;UBERON:0000062!8.87e-08!511;UBERON:0003076!9.74e-08!15;UBERON:0003057!9.74e-08!15;UBERON:0002203!2.03e-07!6;UBERON:0001768!2.03e-07!6;UBERON:0004111!3.00e-07!241;UBERON:0004733!3.65e-07!12;UBERON:0002028!3.65e-07!12;UBERON:0007277!3.65e-07!12;UBERON:0001870!4.79e-07!2;UBERON:0001876!5.23e-07!2;UBERON:0000369!5.58e-07!4;UBERON:0002435!5.58e-07!4;UBERON:0000204!5.58e-07!4;UBERON:0010082!5.58e-07!4;UBERON:0000007!5.71e-07!2 | ||
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|short_description=p3@XKR4 | |short_description=p3@XKR4 | ||
}} | }} |
Latest revision as of 12:52, 18 September 2015
Short description: | p3@XKR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_XKR4_5end |
Coexpression cluster: | C1977_peripheral_occipital_parietal_temporal_neuroblastoma_amygdala_brain |
Association with transcript: | 0bp_to_ENST00000543752, NM_052898, uc003xsf.2_5end |
EntrezGene: | XKR4 |
HGNC: | 29394 |
UniProt: | Q5GH76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.57e-10 | 1 |