FFCP PHASE1:Hg19::chr18:11751608..11751632,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:11751608..11751632,+ to FFCP PHASE1:Hg19::chr18:11751608..11751632,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2774 | |EntrezGene=2774 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4388 | |HGNC=4388 | ||
|TSSclassifier=strong | |||
|UniProt=P38405,A8K1Y9,Q86XU3,Q8N2B4 | |UniProt=P38405,A8K1Y9,Q86XU3,Q8N2B4 | ||
|association_with_transcript=46bp_to_ENST00000269162,NM_001142339,NM_002071,uc002kqd.2,uc010dkz.2_5end | |||
|cluster_id=chr18:11751608..11751632,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_8_at_GNAL_5end | |||
|id=chr18:11751608..11751632,+ | |||
|ontology_enrichment_celltype=CL:0000148!2.09e-14!10;CL:0000541!2.09e-14!10;CL:0000147!1.02e-09!14;CL:0002322!1.86e-09!5;CL:0000047!1.29e-08!8;CL:0000540!2.55e-08!6;CL:0000031!2.55e-08!6;CL:0000404!2.55e-08!6;CL:0000710!1.22e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;5.83e-14;10!CL:0000540;9.61e-11;6!CL:0000404;9.61e-11;6!CL:0000147;8.41e-10;14!CL:0002322;1.47e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.42e-14,10;CL:0000541,6.42e-14,10;CL:0000047,2.94e-12,8;CL:0000540,7.79e-11,6;CL:0000031,7.79e-11,6;CL:0000404,7.79e-11,6;CL:0000147,8.99e-10,14;CL:0002322,1.79e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.53e-12;82!CL:0000031;9.61e-11;6!UBERON:0010122;3.50e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.18e-62!82;UBERON:0005743!7.91e-61!86;UBERON:0001049!5.48e-57!57;UBERON:0005068!5.48e-57!57;UBERON:0006241!5.48e-57!57;UBERON:0007135!5.48e-57!57;UBERON:0002780!2.87e-56!41;UBERON:0001890!2.87e-56!41;UBERON:0006240!2.87e-56!41;UBERON:0007023!2.54e-55!115;UBERON:0003080!1.13e-54!42;UBERON:0002616!1.49e-54!59;UBERON:0000073!1.62e-53!94;UBERON:0001016!1.62e-53!94;UBERON:0000955!1.47e-51!69;UBERON:0006238!1.47e-51!69;UBERON:0001893!4.01e-50!34;UBERON:0002020!1.61e-49!34;UBERON:0003528!1.61e-49!34;UBERON:0002791!2.96e-48!33;UBERON:0001869!3.00e-47!32;UBERON:0003075!7.82e-43!86;UBERON:0007284!7.82e-43!86;UBERON:0002346!2.88e-40!90;UBERON:0002619!5.60e-39!22;UBERON:0003056!2.88e-38!61;UBERON:0001950!2.02e-35!20;UBERON:0000956!1.24e-33!25;UBERON:0000203!1.24e-33!25;UBERON:0000033!2.92e-29!123;UBERON:0000153!2.16e-28!129;UBERON:0007811!2.16e-28!129;UBERON:0004121!4.92e-27!169;UBERON:0000924!5.13e-26!173;UBERON:0006601!5.13e-26!173;UBERON:0002420!1.29e-18!9;UBERON:0007245!1.29e-18!9;UBERON:0010009!1.29e-18!9;UBERON:0010011!1.29e-18!9;UBERON:0000454!1.29e-18!9;UBERON:0002308!2.25e-17!9;UBERON:0000125!2.25e-17!9;UBERON:0009663!1.03e-14!7;UBERON:0000025!1.06e-13!194;UBERON:0001871!3.57e-12!7;UBERON:0000200!4.09e-12!6;UBERON:0004111!5.87e-12!241;UBERON:0000477!1.73e-11!286;UBERON:0000349!4.41e-11!5;UBERON:0001872!8.04e-11!5;UBERON:0002021!1.60e-10!5;UBERON:0000369!9.06e-10!4;UBERON:0002435!9.06e-10!4;UBERON:0000204!9.06e-10!4;UBERON:0010082!9.06e-10!4;UBERON:0000064!2.62e-08!219;UBERON:0005383!9.41e-08!3;UBERON:0005382!9.41e-08!3;UBERON:0001894!1.11e-07!7;UBERON:0006222!1.11e-07!7;UBERON:0000473!1.19e-07!8;UBERON:0002298!2.92e-07!8;UBERON:0000483!3.81e-07!309;UBERON:0003135!4.64e-07!11;UBERON:0000119!6.04e-07!312;UBERON:0002771!8.30e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.27e-71;32!UBERON:0002791;6.69e-66;32!UBERON:0001893;1.08e-64;34!UBERON:0002780;1.82e-61;41!UBERON:0001890;1.82e-61;41!UBERON:0003528;1.28e-60;34!UBERON:0002020;1.28e-60;34!UBERON:0002619;2.17e-60;22!UBERON:0001950;4.80e-53;20!UBERON:0000956;6.99e-53;25!UBERON:0000203;6.99e-53;25!UBERON:0000073;8.86e-36;53!UBERON:0002616;8.86e-36;53!UBERON:0002420;1.13e-30;9!UBERON:0007245;1.13e-30;9!UBERON:0010009;1.13e-30;9!UBERON:0010011;1.13e-30;9!UBERON:0000454;1.13e-30;9!UBERON:0000955;1.20e-29;68!UBERON:0001017;8.33e-26;75!UBERON:0009663;1.22e-22;7!UBERON:0001016;2.17e-22;83!UBERON:0000349;1.61e-21;5!UBERON:0001872;1.01e-20;5!UBERON:0000369;1.25e-18;4!UBERON:0002435;1.25e-18;4!UBERON:0000204;1.25e-18;4!UBERON:0000125;1.86e-17;9!UBERON:0002308;1.86e-17;9!UBERON:0000200;8.24e-17;6!UBERON:0001871;7.13e-15;6!UBERON:0005383;1.93e-14;3!UBERON:0005382;1.93e-14;3!UBERON:0002021;1.69e-13;5!UBERON:0001894;2.70e-10;7!UBERON:0001873;3.50e-10;2!UBERON:0007023;3.74e-10;114!UBERON:0001876;6.75e-10;2!UBERON:0000007;9.13e-10;2!UBERON:0001875;1.21e-09;2!UBERON:0006514;1.21e-09;2!UBERON:0002360;1.31e-09;2!UBERON:0000094;1.31e-09;2!UBERON:0010743;1.31e-09;2!UBERON:0001954;3.60e-09;2!UBERON:0003022;3.60e-09;2!UBERON:0002421;3.60e-09;2!UBERON:0002600;3.60e-09;2!UBERON:0002771;5.33e-09;2!UBERON:0011216;2.23e-08;132!UBERON:0010314;3.37e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,6.44e-84,41;UBERON:0001890,6.44e-84,41;UBERON:0003080,6.44e-84,41;UBERON:0006240,6.44e-84,41;UBERON:0001869,3.59e-80,32;UBERON:0001893,3.20e-75,34;UBERON:0002791,6.89e-74,32;UBERON:0001017,8.22e-73,81;UBERON:0003528,2.61e-69,34;UBERON:0002020,2.61e-69,34;UBERON:0001016,7.70e-65,89;UBERON:0000073,1.18e-63,53;UBERON:0002616,1.18e-63,53;UBERON:0002619,2.30e-60,22;UBERON:0001049,6.41e-60,56;UBERON:0005068,6.41e-60,56;UBERON:0006241,6.41e-60,56;UBERON:0007135,6.41e-60,56;UBERON:0000955,1.54e-58,68;UBERON:0006238,1.54e-58,68;UBERON:0003056,1.68e-54,61;UBERON:0001950,3.82e-53,20;UBERON:0000956,7.36e-53,25;UBERON:0000203,7.36e-53,25;UBERON:0003075,7.21e-39,82;UBERON:0007284,7.21e-39,82;UBERON:0002346,9.53e-37,86;UBERON:0002420,1.07e-30,9;UBERON:0007245,1.07e-30,9;UBERON:0010009,1.07e-30,9;UBERON:0010011,1.07e-30,9;UBERON:0000454,1.07e-30,9;UBERON:0007023,1.32e-30,114;UBERON:0004121,3.69e-30,171;UBERON:0000924,3.69e-30,171;UBERON:0006601,3.69e-30,171;UBERON:0010371,3.34e-29,104;UBERON:0010314,2.97e-23,132;UBERON:0009663,1.16e-22,7;UBERON:0000349,2.31e-21,5;UBERON:0011216,4.64e-21,223;UBERON:0001872,8.07e-21,5;UBERON:0000369,1.25e-18,4;UBERON:0002435,1.25e-18,4;UBERON:0000204,1.25e-18,4;UBERON:0010082,1.25e-18,4;UBERON:0000125,1.79e-17,9;UBERON:0002308,1.79e-17,9;UBERON:0000200,7.98e-17,6;UBERON:0001871,6.84e-15,6;UBERON:0005383,1.93e-14,3;UBERON:0005382,1.93e-14,3;UBERON:0000025,1.04e-13,192;UBERON:0002021,1.64e-13,5;UBERON:0001894,2.71e-10,7;UBERON:0006222,2.71e-10,7;UBERON:0001873,3.51e-10,2;UBERON:0010122,3.51e-10,2;UBERON:0001876,6.76e-10,2;UBERON:0000007,8.75e-10,2;UBERON:0001875,1.13e-09,2;UBERON:0006514,1.13e-09,2;UBERON:0004111,1.45e-09,240;UBERON:0002360,1.59e-09,2;UBERON:0000094,1.59e-09,2;UBERON:0010743,1.59e-09,2;UBERON:0002771,4.92e-09,2;UBERON:0001954,5.12e-09,2;UBERON:0003022,5.12e-09,2;UBERON:0002421,5.12e-09,2;UBERON:0002600,5.12e-09,2 | |||
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|short_description=p8@GNAL | |||
}} | }} |
Latest revision as of 18:48, 18 September 2015
Short description: | p8@GNAL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GNAL_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 46bp_to_ENST00000269162, NM_001142339, NM_002071, uc002kqd.2, uc010dkz.2_5end |
EntrezGene: | GNAL |
HGNC: | 4388 |
UniProt: | P38405A8K1Y9Q86XU3Q8N2B4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.42e-14 | 10 |
melanoblast | 6.42e-14 | 10 |
neuronal stem cell | 2.94e-12 | 8 |
neuron | 7.79e-11 | 6 |
neuroblast | 7.79e-11 | 6 |
electrically signaling cell | 7.79e-11 | 6 |
pigment cell | 8.99e-10 | 14 |
embryonic stem cell | 1.79e-07 | 5 |