FFCP PHASE1:Hg19::chr19:46477121..46477125,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4858 | |EntrezGene=4858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7887 | |HGNC=7887 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNW9 | |UniProt=Q9UNW9 | ||
|association_with_transcript=-464bp_to_ENST00000263257,NM_002516,uc002pdv.2_5end | |association_with_transcript=-464bp_to_ENST00000263257,NM_002516,uc002pdv.2_5end | ||
|cluster_id=chr19:46477121..46477125,- | |||
|coexpression_cluster_id=C16 | |coexpression_cluster_id=C16 | ||
|description=CAGE_peak_3_at_NOVA2_5end | |description=CAGE_peak_3_at_NOVA2_5end | ||
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|ontology_enrichment_celltype=CL:0002139!2.98e-12!24;CL:0000115!6.12e-11!35;CL:0000071!6.82e-08!18;CL:0002546!6.82e-08!18;CL:0002078!1.30e-07!44 | |ontology_enrichment_celltype=CL:0002139!2.98e-12!24;CL:0000115!6.12e-11!35;CL:0000071!6.82e-08!18;CL:0002546!6.82e-08!18;CL:0002078!1.30e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002188;4.88e-10;5!CL:1000746;2.72e-07;7!CL:1000612;2.72e-07;7 | |ontology_enrichment_celltype_v019=CL:0002188;4.88e-10;5!CL:1000746;2.72e-07;7!CL:1000612;2.72e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002188,6.15e-10,5;CL:1000746,3.20e-07,7;CL:1000612,3.20e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.28e-11;2!UBERON:0006601;2.37e-09;82 | |ontology_enrichment_development_v019=UBERON:0010122;1.28e-11;2!UBERON:0006601;2.37e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.16e-56!57;UBERON:0005068!6.16e-56!57;UBERON:0006241!6.16e-56!57;UBERON:0007135!6.16e-56!57;UBERON:0007023!9.77e-53!115;UBERON:0002616!2.97e-48!59;UBERON:0001017!2.47e-47!82;UBERON:0005743!4.74e-46!86;UBERON:0002780!1.48e-44!41;UBERON:0001890!1.48e-44!41;UBERON:0006240!1.48e-44!41;UBERON:0000955!4.77e-44!69;UBERON:0006238!4.77e-44!69;UBERON:0003080!3.38e-43!42;UBERON:0000073!3.58e-43!94;UBERON:0001016!3.58e-43!94;UBERON:0003075!4.25e-43!86;UBERON:0007284!4.25e-43!86;UBERON:0002346!4.45e-42!90;UBERON:0002020!4.77e-41!34;UBERON:0003528!4.77e-41!34;UBERON:0001893!6.94e-41!34;UBERON:0002791!1.45e-39!33;UBERON:0001869!9.75e-39!32;UBERON:0000025!2.29e-32!194;UBERON:0004111!3.29e-31!241;UBERON:0002619!4.59e-31!22;UBERON:0003056!7.38e-31!61;UBERON:0000956!9.70e-29!25;UBERON:0000203!9.70e-29!25;UBERON:0001950!2.41e-28!20;UBERON:0000477!1.78e-27!286;UBERON:0000033!5.85e-24!123;UBERON:0000153!6.26e-23!129;UBERON:0007811!6.26e-23!129;UBERON:0004121!6.83e-22!169;UBERON:0000924!7.29e-22!173;UBERON:0006601!7.29e-22!173;UBERON:0000483!6.59e-18!309;UBERON:0000119!1.74e-17!312;UBERON:0002420!1.53e-14!9;UBERON:0007245!1.53e-14!9;UBERON:0010009!1.53e-14!9;UBERON:0010011!1.53e-14!9;UBERON:0000454!1.53e-14!9;UBERON:0002308!1.01e-13!9;UBERON:0000125!1.01e-13!9;UBERON:0003076!1.98e-13!15;UBERON:0003057!1.98e-13!15;UBERON:0009663!1.85e-11!7;UBERON:0004732!3.43e-11!13;UBERON:0000064!4.58e-11!219;UBERON:0000467!1.26e-10!625;UBERON:0000480!1.49e-10!626;UBERON:0001871!1.76e-10!7;UBERON:0000468!2.37e-10!659;UBERON:0000200!3.00e-10!6;UBERON:0004733!6.56e-10!12;UBERON:0002028!6.56e-10!12;UBERON:0007277!6.56e-10!12;UBERON:0000922!8.71e-10!612;UBERON:0000923!2.19e-09!604;UBERON:0005291!2.19e-09!604;UBERON:0006598!2.19e-09!604;UBERON:0002532!2.19e-09!604;UBERON:0002050!2.57e-09!605;UBERON:0005423!2.57e-09!605;UBERON:0000481!3.44e-09!347;UBERON:0002680!4.91e-09!9;UBERON:0001895!4.91e-09!9;UBERON:0010092!4.91e-09!9;UBERON:0002021!9.24e-09!5;UBERON:0000055!9.25e-09!69;UBERON:0000349!9.99e-09!5;UBERON:0001872!1.88e-08!5;UBERON:0004872!4.64e-08!84;UBERON:0001986!6.82e-08!18;UBERON:0004638!6.82e-08!18;UBERON:0004852!6.82e-08!18;UBERON:0000369!1.71e-07!4;UBERON:0002435!1.71e-07!4;UBERON:0000204!1.71e-07!4;UBERON:0010082!1.71e-07!4;UBERON:0002049!2.31e-07!79;UBERON:0007798!2.31e-07!79;UBERON:0001009!7.72e-07!113;UBERON:0000475!7.79e-07!365 | |ontology_enrichment_uberon=UBERON:0001049!6.16e-56!57;UBERON:0005068!6.16e-56!57;UBERON:0006241!6.16e-56!57;UBERON:0007135!6.16e-56!57;UBERON:0007023!9.77e-53!115;UBERON:0002616!2.97e-48!59;UBERON:0001017!2.47e-47!82;UBERON:0005743!4.74e-46!86;UBERON:0002780!1.48e-44!41;UBERON:0001890!1.48e-44!41;UBERON:0006240!1.48e-44!41;UBERON:0000955!4.77e-44!69;UBERON:0006238!4.77e-44!69;UBERON:0003080!3.38e-43!42;UBERON:0000073!3.58e-43!94;UBERON:0001016!3.58e-43!94;UBERON:0003075!4.25e-43!86;UBERON:0007284!4.25e-43!86;UBERON:0002346!4.45e-42!90;UBERON:0002020!4.77e-41!34;UBERON:0003528!4.77e-41!34;UBERON:0001893!6.94e-41!34;UBERON:0002791!1.45e-39!33;UBERON:0001869!9.75e-39!32;UBERON:0000025!2.29e-32!194;UBERON:0004111!3.29e-31!241;UBERON:0002619!4.59e-31!22;UBERON:0003056!7.38e-31!61;UBERON:0000956!9.70e-29!25;UBERON:0000203!9.70e-29!25;UBERON:0001950!2.41e-28!20;UBERON:0000477!1.78e-27!286;UBERON:0000033!5.85e-24!123;UBERON:0000153!6.26e-23!129;UBERON:0007811!6.26e-23!129;UBERON:0004121!6.83e-22!169;UBERON:0000924!7.29e-22!173;UBERON:0006601!7.29e-22!173;UBERON:0000483!6.59e-18!309;UBERON:0000119!1.74e-17!312;UBERON:0002420!1.53e-14!9;UBERON:0007245!1.53e-14!9;UBERON:0010009!1.53e-14!9;UBERON:0010011!1.53e-14!9;UBERON:0000454!1.53e-14!9;UBERON:0002308!1.01e-13!9;UBERON:0000125!1.01e-13!9;UBERON:0003076!1.98e-13!15;UBERON:0003057!1.98e-13!15;UBERON:0009663!1.85e-11!7;UBERON:0004732!3.43e-11!13;UBERON:0000064!4.58e-11!219;UBERON:0000467!1.26e-10!625;UBERON:0000480!1.49e-10!626;UBERON:0001871!1.76e-10!7;UBERON:0000468!2.37e-10!659;UBERON:0000200!3.00e-10!6;UBERON:0004733!6.56e-10!12;UBERON:0002028!6.56e-10!12;UBERON:0007277!6.56e-10!12;UBERON:0000922!8.71e-10!612;UBERON:0000923!2.19e-09!604;UBERON:0005291!2.19e-09!604;UBERON:0006598!2.19e-09!604;UBERON:0002532!2.19e-09!604;UBERON:0002050!2.57e-09!605;UBERON:0005423!2.57e-09!605;UBERON:0000481!3.44e-09!347;UBERON:0002680!4.91e-09!9;UBERON:0001895!4.91e-09!9;UBERON:0010092!4.91e-09!9;UBERON:0002021!9.24e-09!5;UBERON:0000055!9.25e-09!69;UBERON:0000349!9.99e-09!5;UBERON:0001872!1.88e-08!5;UBERON:0004872!4.64e-08!84;UBERON:0001986!6.82e-08!18;UBERON:0004638!6.82e-08!18;UBERON:0004852!6.82e-08!18;UBERON:0000369!1.71e-07!4;UBERON:0002435!1.71e-07!4;UBERON:0000204!1.71e-07!4;UBERON:0010082!1.71e-07!4;UBERON:0002049!2.31e-07!79;UBERON:0007798!2.31e-07!79;UBERON:0001009!7.72e-07!113;UBERON:0000475!7.79e-07!365 | ||
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|short_description=p3@NOVA2 | |short_description=p3@NOVA2 | ||
}} | }} |
Latest revision as of 19:45, 18 September 2015
Short description: | p3@NOVA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NOVA2_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -464bp_to_ENST00000263257, NM_002516, uc002pdv.2_5end |
EntrezGene: | NOVA2 |
HGNC: | 7887 |
UniProt: | Q9UNW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 6.15e-10 | 5 |
glomerular cell | 3.20e-07 | 7 |
kidney corpuscule cell | 3.20e-07 | 7 |