FFCP PHASE1:Hg19::chr3:51741072..51741106,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:51741072..51741106,+
|short_description=p1@GRM2
|description=CAGE_peak_1_at_GRM2_5end
|association_with_transcript=0bp_to_ENST00000296479,ENST00000395052,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2912 | |EntrezGene=2912 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4594 | |HGNC=4594 | ||
|TSSclassifier=strong | |||
|UniProt=Q14416,Q86YG3 | |UniProt=Q14416,Q86YG3 | ||
|association_with_transcript=0bp_to_ENST00000296479,ENST00000395052,ENST00000475478,NM_000839,NM_001130063,uc003dbo.3,uc010hlu.2,uc010hlv.2_5end | |||
|cluster_id=chr3:51741072..51741106,+ | |||
|coexpression_cluster_id=C837 | |||
|description=CAGE_peak_1_at_GRM2_5end | |||
|id=chr3:51741072..51741106,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.72e-07!6;CL:0000031!1.72e-07!6;CL:0000404!1.72e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.17e-14;6!CL:0000404;6.17e-14;6!CL:0002322;7.49e-11;5!CL:0002321;1.88e-10;15!CL:0000333;1.52e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.10e-14,6;CL:0000031,6.10e-14,6;CL:0000404,6.10e-14,6;CL:0002322,8.94e-11,5;CL:0000047,2.94e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.47e-15;82!CL:0000031;6.17e-14;6!UBERON:0006215;7.15e-08;3 | |||
|ontology_enrichment_disease=DOID:3095!2.35e-12!22;DOID:2994!2.35e-12!22;DOID:171!4.93e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.38e-14;10!DOID:3095;1.83e-10;22!DOID:2994;1.83e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.16e-14,10;DOID:3095,1.64e-10,22;DOID:2994,1.64e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.63e-44!94;UBERON:0001016!3.63e-44!94;UBERON:0001017!9.60e-43!82;UBERON:0005743!1.17e-42!86;UBERON:0001049!4.56e-39!57;UBERON:0005068!4.56e-39!57;UBERON:0006241!4.56e-39!57;UBERON:0007135!4.56e-39!57;UBERON:0002346!5.75e-35!90;UBERON:0000955!1.49e-34!69;UBERON:0006238!1.49e-34!69;UBERON:0002616!2.66e-33!59;UBERON:0003075!3.72e-31!86;UBERON:0007284!3.72e-31!86;UBERON:0002780!5.26e-29!41;UBERON:0001890!5.26e-29!41;UBERON:0006240!5.26e-29!41;UBERON:0000924!4.51e-28!173;UBERON:0006601!4.51e-28!173;UBERON:0003080!5.49e-28!42;UBERON:0001893!4.45e-27!34;UBERON:0002020!7.34e-27!34;UBERON:0003528!7.34e-27!34;UBERON:0002791!5.43e-26!33;UBERON:0007023!1.20e-25!115;UBERON:0001869!1.48e-25!32;UBERON:0004121!4.29e-25!169;UBERON:0002619!2.40e-23!22;UBERON:0000033!5.07e-22!123;UBERON:0003056!1.03e-21!61;UBERON:0000153!1.50e-21!129;UBERON:0007811!1.50e-21!129;UBERON:0001950!2.31e-21!20;UBERON:0000956!1.36e-19!25;UBERON:0000203!1.36e-19!25;UBERON:0003076!5.08e-12!15;UBERON:0003057!5.08e-12!15;UBERON:0004733!1.02e-09!12;UBERON:0002028!1.02e-09!12;UBERON:0007277!1.02e-09!12;UBERON:0002420!4.70e-09!9;UBERON:0007245!4.70e-09!9;UBERON:0010009!4.70e-09!9;UBERON:0010011!4.70e-09!9;UBERON:0000454!4.70e-09!9;UBERON:0004732!1.03e-08!13;UBERON:0002308!1.03e-08!9;UBERON:0000125!1.03e-08!9;UBERON:0000200!9.77e-08!6;UBERON:0001871!1.37e-07!7;UBERON:0002680!2.70e-07!9;UBERON:0001895!2.70e-07!9;UBERON:0010092!2.70e-07!9;UBERON:0009663!4.45e-07!7;UBERON:0001872!5.33e-07!5;UBERON:0002021!5.46e-07!5;UBERON:0000025!5.73e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.27e-48;22!UBERON:0001950;1.15e-43;20!UBERON:0001869;8.28e-43;32!UBERON:0001893;9.92e-42;34!UBERON:0000956;1.67e-41;25!UBERON:0000203;1.67e-41;25!UBERON:0003528;2.09e-40;34!UBERON:0002020;2.09e-40;34!UBERON:0002791;5.28e-39;32!UBERON:0002780;2.02e-32;41!UBERON:0001890;2.02e-32;41!UBERON:0000073;5.59e-31;53!UBERON:0002616;5.59e-31;53!UBERON:0000955;9.91e-22;68!UBERON:0001016;1.29e-19;83!UBERON:0001017;4.01e-19;75!UBERON:0000200;1.76e-14;6!UBERON:0001872;5.87e-13;5!UBERON:0002021;6.72e-13;5!UBERON:0001871;1.36e-12;6!UBERON:0000349;4.66e-12;5!UBERON:0004733;5.46e-11;12!UBERON:0002028;5.46e-11;12!UBERON:0002346;1.31e-10;4!UBERON:0000923;1.31e-10;4!UBERON:0010316;1.31e-10;4!UBERON:0005291;1.31e-10;4!UBERON:0004732;4.94e-10;13!UBERON:0002298;3.87e-09;6!UBERON:0007023;6.63e-09;114!UBERON:0002680;8.19e-09;9!UBERON:0001895;8.19e-09;9!UBERON:0002420;1.62e-08;9!UBERON:0007245;1.62e-08;9!UBERON:0010009;1.62e-08;9!UBERON:0010011;1.62e-08;9!UBERON:0000454;1.62e-08;9!UBERON:0002050;1.82e-08;5!UBERON:0005423;1.82e-08;5!UBERON:0000125;3.98e-08;9!UBERON:0002308;3.98e-08;9!UBERON:0001870;5.51e-08;3!UBERON:0000013;1.52e-07;5!UBERON:0002410;1.52e-07;5!UBERON:0000988;2.13e-07;3!UBERON:0011216;4.44e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.37e-63,89;UBERON:0001017,4.96e-60,81;UBERON:0000073,2.29e-54,53;UBERON:0002616,2.29e-54,53;UBERON:0001049,1.17e-53,56;UBERON:0005068,1.17e-53,56;UBERON:0006241,1.17e-53,56;UBERON:0007135,1.17e-53,56;UBERON:0000955,4.97e-50,68;UBERON:0006238,4.97e-50,68;UBERON:0002619,8.02e-48,22;UBERON:0001893,9.02e-48,34;UBERON:0001869,9.74e-48,32;UBERON:0003528,2.40e-47,34;UBERON:0002020,2.40e-47,34;UBERON:0002780,2.37e-44,41;UBERON:0001890,2.37e-44,41;UBERON:0003080,2.37e-44,41;UBERON:0006240,2.37e-44,41;UBERON:0002346,4.64e-44,86;UBERON:0002791,7.10e-44,32;UBERON:0001950,1.20e-43,20;UBERON:0000956,1.63e-41,25;UBERON:0000203,1.63e-41,25;UBERON:0003075,2.50e-37,82;UBERON:0007284,2.50e-37,82;UBERON:0004121,1.71e-36,171;UBERON:0000924,1.71e-36,171;UBERON:0006601,1.71e-36,171;UBERON:0003056,2.33e-31,61;UBERON:0010371,1.19e-30,104;UBERON:0007023,4.88e-25,114;UBERON:0010314,1.72e-21,132;UBERON:0011216,9.44e-21,223;UBERON:0000200,1.89e-14,6;UBERON:0001872,6.40e-13,5;UBERON:0002021,6.72e-13,5;UBERON:0001871,1.31e-12,6;UBERON:0000349,3.95e-12,5;UBERON:0004733,5.55e-11,12;UBERON:0002028,5.55e-11,12;UBERON:0007277,5.55e-11,12;UBERON:0003076,1.36e-10,15;UBERON:0003057,1.36e-10,15;UBERON:0004732,5.01e-10,13;UBERON:0000025,9.55e-10,192;UBERON:0002298,4.10e-09,6;UBERON:0002680,8.95e-09,9;UBERON:0001895,8.95e-09,9;UBERON:0010092,8.95e-09,9;UBERON:0002420,1.44e-08,9;UBERON:0007245,1.44e-08,9;UBERON:0010009,1.44e-08,9;UBERON:0010011,1.44e-08,9;UBERON:0000454,1.44e-08,9;UBERON:0000125,4.36e-08,9;UBERON:0002308,4.36e-08,9;UBERON:0001870,5.51e-08,3;UBERON:0000013,1.39e-07,5;UBERON:0002410,1.39e-07,5;UBERON:0000988,2.56e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.369363174230364,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,3.20898734969396,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0,2.19552671033272,2.51806559810822,3.02104251460748,2.90250954043037,2.27088765788066,4.01475094983413,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0.34779121492523,0,0.577465791044295,1.38895653772983,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,8.50617694055465,7.70574820538004,7.65526501983796,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0.909382714338778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95460974377781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,6.75213198770461,0,0,5.27813520319984,0.19924798825107,0.276283915531148,2.77126022639704,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,19.3866549219044,5.84439018419663,21.9575177801314,0,0,0,0,0,0,12.7555048099342,42.2826689405719,15.9734995338629,2.65722415744152,1.08536794762867,6.10326945268333,3.98085335752409,7.68423809279223,10.3111136662367,0,0,0.153900517007594,0,0,0.0897576444097721,0.760531603454056,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0.216388639742091,0,0,0,0,0,0,1.07841812769083,0,2.57690890297873,0,0.19566461893209,0,0,0,25.7101119769612,0.189559738885464,0.450970258243478,0.311064574191741,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0.290967049465258,0.0882561266915003,4.51961481561065,0,0,13.4218887426463,0,0,0,0.19980960958213,0,0.114536596165916,0.343189995723929,0,0.49701014226173,0.235694034616795,0,0,0,0,0.600420288709789,1.9166753044879,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0.403100834920358,0,0,0,0,0,0.295282444544246,0,4.77137813885582,5.31193283835145,4.66184130548556,3.98864366131978,2.07720169014593,0,0,14.701392711242,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,2.38018683136842,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,2.65820453990096,5.00307686098049,7.26107398097699,0.573409195690071,2.88415533995816,2.6080489235381,0.415045904808692,0,0,0,0,11.708372645172,22.7526014918996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21662387062389,0,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,7.46595555219346,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,3.83683113910955,0.862598491173454,1.88719130227076,3.05786986937639,5.60117348848283,38.2634856183029,19.5818507529223,10.6142534414916,0,0,0.80057074828547,0.352675943690684,0,8.0928823621539,4.25089728976755,6.38535436228605,13.7427964041306,25.4592413183935,12.9324062108087,8.88116050975181,0,0.0981477185010256,0,0,0.115525666150338,0,2.7614397042404,0.397832444232549,0.376051641746286,0,0,0,0,0,11.5489269697455,7.02970288752463,6.61397748803789,10.209945441219,20.2380679336741,0,0.496211178389294,4.22090986463089,0,0.535701835878287,0,0,0.91064876540519,0,0,0,10.8071875433162,12.7599180711927,0,0.111231401892069,0.078493092850514,0.314231179832004,0,0,0,0,1.42953088353313,9.16478948049814,0,0.173858272302579,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0.485710993059139,0,1.39265542612958,2.14056163399623,0.11294608203896,5.16720428703517,0,0.154348316215889,0,0,0,0,0.981542335574726,1.18818560130834,0.8453114551668,0,0.375935671919414,0.644578879735772,0,0,0.352894871715692,0,0,0,0.573358332605805,0.473314686579554,15.5020597635285,30.108197633486,0,0,0,0,0.756998549010474,1.20192129160065,2.91406552326305,0.305966489225945,0,0.918948995348449,1.25353769646188,1.59135266258303,1.87574891109325,4.1458471972939,0.827463966895162,0,0.476128862927481,0,0.124149428591716,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| ||
|short_description=p1@GRM2 | |||
}} | }} |
Latest revision as of 21:25, 18 September 2015
Short description: | p1@GRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRM2_5end |
Coexpression cluster: | C837_neuroectodermal_duodenum_temporal_occipital_medial_carcinoid_parietal |
Association with transcript: | 0bp_to_ENST00000296479, ENST00000395052, ENST00000475478, NM_000839, NM_001130063, uc003dbo.3, uc010hlu.2, uc010hlv.2_5end |
EntrezGene: | GRM2 |
HGNC: | 4594 |
UniProt: | Q14416Q86YG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.10e-14 | 6 |
neuroblast | 6.10e-14 | 6 |
electrically signaling cell | 6.10e-14 | 6 |
embryonic stem cell | 8.94e-11 | 5 |
neuronal stem cell | 2.94e-10 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.16e-14 | 10 |
germ cell and embryonal cancer | 1.64e-10 | 22 |
germ cell cancer | 1.64e-10 | 22 |