FFCP PHASE1:Hg19::chr2:183387561..183387572,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5136 | |EntrezGene=5136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8774 | |HGNC=8774 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-54bp_to_uc010zfq.1_5end | |association_with_transcript=-54bp_to_uc010zfq.1_5end | ||
|cluster_id=chr2:183387561..183387572,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_10_at_PDE1A_5end | |description=CAGE_peak_10_at_PDE1A_5end | ||
|id=chr2:183387561..183387572,- | |id=chr2:183387561..183387572,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.93e-20;3!UBERON:0006601;5.51e-10;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.21e-102!57;UBERON:0005068!8.21e-102!57;UBERON:0006241!8.21e-102!57;UBERON:0007135!8.21e-102!57;UBERON:0001017!9.40e-96!82;UBERON:0005743!7.74e-91!86;UBERON:0002616!5.18e-85!59;UBERON:0000073!1.13e-84!94;UBERON:0001016!1.13e-84!94;UBERON:0000955!8.64e-78!69;UBERON:0006238!8.64e-78!69;UBERON:0002780!4.41e-76!41;UBERON:0001890!4.41e-76!41;UBERON:0006240!4.41e-76!41;UBERON:0003080!4.22e-74!42;UBERON:0001893!1.91e-71!34;UBERON:0002020!2.37e-71!34;UBERON:0003528!2.37e-71!34;UBERON:0003075!1.97e-70!86;UBERON:0007284!1.97e-70!86;UBERON:0002346!6.03e-70!90;UBERON:0002791!1.50e-68!33;UBERON:0001869!4.10e-66!32;UBERON:0002619!3.15e-65!22;UBERON:0001950!3.16e-59!20;UBERON:0000956!5.62e-57!25;UBERON:0000203!5.62e-57!25;UBERON:0003056!1.29e-48!61;UBERON:0007023!3.74e-48!115;UBERON:0000924!7.02e-43!173;UBERON:0006601!7.02e-43!173;UBERON:0004121!2.79e-42!169;UBERON:0000033!1.38e-41!123;UBERON:0000153!3.87e-41!129;UBERON:0007811!3.87e-41!129;UBERON:0003076!3.28e-27!15;UBERON:0003057!3.28e-27!15;UBERON:0000025!2.42e-22!194;UBERON:0000200!4.52e-20!6;UBERON:0001871!4.57e-20!7;UBERON:0004733!9.54e-20!12;UBERON:0002028!9.54e-20!12;UBERON:0007277!9.54e-20!12;UBERON:0004732!4.30e-18!13;UBERON:0000349!7.28e-17!5;UBERON:0002680!1.23e-16!9;UBERON:0001895!1.23e-16!9;UBERON:0010092!1.23e-16!9;UBERON:0002021!1.30e-16!5;UBERON:0001872!1.91e-16!5;UBERON:0002420!1.94e-16!9;UBERON:0007245!1.94e-16!9;UBERON:0010009!1.94e-16!9;UBERON:0010011!1.94e-16!9;UBERON:0000454!1.94e-16!9;UBERON:0004111!7.33e-16!241;UBERON:0002308!1.19e-15!9;UBERON:0000125!1.19e-15!9;UBERON:0002298!5.88e-13!8;UBERON:0000477!1.48e-12!286;UBERON:0000483!2.77e-12!309;UBERON:0000119!4.66e-12!312;UBERON:0002771!3.41e-11!3;UBERON:0000064!8.10e-11!219;UBERON:0000475!9.62e-11!365;UBERON:0009663!1.05e-10!7;UBERON:0006331!1.14e-09!3;UBERON:0000988!1.33e-09!3;UBERON:0002240!1.75e-09!3;UBERON:0002037!3.21e-09!6;UBERON:0006215!3.21e-09!6;UBERON:0001876!4.45e-08!2;UBERON:0001870!4.92e-08!2;UBERON:0001954!1.46e-07!2;UBERON:0003022!1.46e-07!2;UBERON:0002421!1.46e-07!2;UBERON:0002600!1.46e-07!2;UBERON:0000369!1.72e-07!4;UBERON:0002435!1.72e-07!4;UBERON:0000204!1.72e-07!4;UBERON:0010082!1.72e-07!4;UBERON:0001897!2.37e-07!2;UBERON:0001894!3.23e-07!7;UBERON:0006222!3.23e-07!7;UBERON:0002360!5.05e-07!2;UBERON:0000094!5.05e-07!2;UBERON:0007645!5.05e-07!2;UBERON:0002148!5.37e-07!2;UBERON:0009662!5.37e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.71e-95;22!UBERON:0001950;1.80e-83;20!UBERON:0000956;2.04e-83;25!UBERON:0000203;2.04e-83;25!UBERON:0001869;6.89e-71;32!UBERON:0002791;1.51e-63;32!UBERON:0001893;5.69e-62;34!UBERON:0003528;4.19e-59;34!UBERON:0002020;4.19e-59;34!UBERON:0002780;4.55e-47;41!UBERON:0001890;4.55e-47;41!UBERON:0000073;2.22e-38;53!UBERON:0002616;2.22e-38;53!UBERON:0000200;1.15e-37;6!UBERON:0000349;4.92e-31;5!UBERON:0001872;1.72e-30;5!UBERON:0001016;3.39e-22;83!UBERON:0001017;9.47e-22;75!UBERON:0000955;5.10e-21;68!UBERON:0002021;1.28e-20;5!UBERON:0001870;5.26e-20;3!UBERON:0001871;3.68e-15;6!UBERON:0002771;3.86e-14;2!UBERON:0001876;5.00e-14;2!UBERON:0002702;5.51e-14;2!UBERON:0001954;3.94e-13;2!UBERON:0003022;3.94e-13;2!UBERON:0002421;3.94e-13;2!UBERON:0002600;3.94e-13;2!UBERON:0007023;1.70e-10;114!UBERON:0002037;1.77e-10;6!UBERON:0011216;6.57e-10;132!UBERON:0002022;9.43e-08;1!UBERON:0003112;9.43e-08;1!UBERON:0011158;9.43e-08;1!UBERON:0003128;9.43e-08;1!UBERON:0001703;9.43e-08;1!UBERON:0002241;9.43e-08;1!UBERON:0002581;2.10e-07;1!UBERON:0001882;2.10e-07;1!UBERON:0007190;2.10e-07;1!UBERON:0005403;2.10e-07;1!UBERON:0002680;3.97e-07;9!UBERON:0001895;3.97e-07;9!UBERON:0002420;6.84e-07;9!UBERON:0007245;6.84e-07;9!UBERON:0010009;6.84e-07;9!UBERON:0010011;6.84e-07;9!UBERON:0000454;6.84e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.81e-95,22;UBERON:0001950,1.91e-83,20;UBERON:0000956,2.06e-83,25;UBERON:0000203,2.06e-83,25;UBERON:0001869,2.25e-79,32;UBERON:0001893,1.33e-74,34;UBERON:0002791,5.41e-72,32;UBERON:0000073,4.03e-68,53;UBERON:0002616,4.03e-68,53;UBERON:0002780,1.14e-67,41;UBERON:0001890,1.14e-67,41;UBERON:0003080,1.14e-67,41;UBERON:0006240,1.14e-67,41;UBERON:0003528,1.19e-67,34;UBERON:0002020,1.19e-67,34;UBERON:0001049,2.74e-64,56;UBERON:0005068,2.74e-64,56;UBERON:0006241,2.74e-64,56;UBERON:0007135,2.74e-64,56;UBERON:0001017,2.28e-58,81;UBERON:0000955,5.98e-56,68;UBERON:0006238,5.98e-56,68;UBERON:0001016,3.64e-52,89;UBERON:0003056,1.90e-44,61;UBERON:0003075,1.15e-42,82;UBERON:0007284,1.15e-42,82;UBERON:0002346,1.74e-40,86;UBERON:0000200,2.11e-37,6;UBERON:0010371,1.01e-32,104;UBERON:0000349,3.60e-31,5;UBERON:0001872,2.35e-30,5;UBERON:0007023,9.30e-30,114;UBERON:0010314,3.71e-27,132;UBERON:0004121,3.73e-25,171;UBERON:0000924,3.73e-25,171;UBERON:0006601,3.73e-25,171;UBERON:0011216,2.56e-21,223;UBERON:0002021,1.42e-20,5;UBERON:0001870,4.08e-20,3;UBERON:0000025,1.41e-15,192;UBERON:0001871,3.19e-15,6;UBERON:0001876,3.74e-14,2;UBERON:0002771,3.99e-14,2;UBERON:0002702,5.17e-14,2;UBERON:0001954,3.71e-13,2;UBERON:0003022,3.71e-13,2;UBERON:0002421,3.71e-13,2;UBERON:0002600,3.71e-13,2;UBERON:0004111,1.72e-11,240;UBERON:0002037,1.49e-10,6;UBERON:0006215,1.49e-10,6;UBERON:0000483,5.92e-08,306;UBERON:0000119,7.90e-08,309;UBERON:0003112,8.28e-08,1;UBERON:0011158,8.28e-08,1;UBERON:0003128,8.28e-08,1;UBERON:0001703,8.28e-08,1;UBERON:0002241,8.28e-08,1;UBERON:0004761,8.28e-08,1;UBERON:0009617,8.28e-08,1;UBERON:0002022,1.07e-07,1;UBERON:0001882,2.17e-07,1;UBERON:0005403,2.17e-07,1;UBERON:0007190,2.80e-07,1;UBERON:0002581,2.98e-07,1;UBERON:0002680,3.55e-07,9;UBERON:0001895,3.55e-07,9;UBERON:0010092,3.55e-07,9;UBERON:0002420,6.31e-07,9;UBERON:0007245,6.31e-07,9;UBERON:0010009,6.31e-07,9;UBERON:0010011,6.31e-07,9;UBERON:0000454,6.31e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,2.95405774462077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,2.13366625772258,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0.241192877250816,9.15490417902499,7.29823115546083,2.95547618953547,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91229661397042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.36203406111576,0,0,0,0,0,2.36923270966296,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,9.15196986764724,2.50381861413,0,0.887432412294818,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48865185073115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0,1.47727217721857,4.25089728976755,2.07524016774297,2.2562800066483,1.76450187355203,0.414943514785307,2.58361033010962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,1.56215619722769,2.48024155801421,1.26831620387814,1.64092442705466,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.339848664884159,1.11813715056843,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,5.37167092935694,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.679914901909147,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.517164979309476,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0.773288812777695,1.00509759200609,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,2.95405774462077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,2.13366625772258,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0.241192877250816,9.15490417902499,7.29823115546083,2.95547618953547,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.468528891450678,0,0,0,0,0,0.91821828489147,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91229661397042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.36203406111576,0,0,0,0,0,2.36923270966296,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.79339561045614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,9.15196986764724,2.50381861413,0,0.887432412294818,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48865185073115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0,0,0,0,0.425149840203366,0,0,0,0,0,0,0,1.47727217721857,4.25089728976755,2.07524016774297,2.2562800066483,1.76450187355203,0.414943514785307,2.58361033010962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,1.56215619722769,2.48024155801421,1.26831620387814,1.64092442705466,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.339848664884159,1.11813715056843,0,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,5.37167092935694,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.679914901909147,1.74540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.517164979309476,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@PDE1A | |short_description=p10@PDE1A | ||
}} | }} |
Latest revision as of 22:14, 18 September 2015
Short description: | p10@PDE1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PDE1A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -54bp_to_uc010zfq.1_5end |
EntrezGene: | PDE1A |
HGNC: | 8774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data