FFCP PHASE1:Hg19::chr7:54610055..54610077,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222008 | |EntrezGene=222008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28499 | |HGNC=28499 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCX6 | |UniProt=B5MCX6 | ||
|association_with_transcript=-31bp_to_ENST00000404951_5end | |association_with_transcript=-31bp_to_ENST00000404951_5end | ||
|cluster_id=chr7:54610055..54610077,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_4_at_VSTM2A_5end | |description=CAGE_peak_4_at_VSTM2A_5end | ||
|id=chr7:54610055..54610077,+ | |id=chr7:54610055..54610077,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:169;6.57e-09;6 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0001869;4.37e-80;32!UBERON:0002619;5.24e-77;22!UBERON:0003528;1.44e-76;34!UBERON:0002020;1.44e-76;34!UBERON:0002791;4.01e-75;32!UBERON:0001893;7.16e-72;34!UBERON:0001950;6.61e-71;20!UBERON:0000956;2.19e-67;25!UBERON:0000203;2.19e-67;25!UBERON:0002780;3.60e-59;41!UBERON:0001890;3.60e-59;41!UBERON:0000073;5.32e-41;53!UBERON:0002616;5.32e-41;53!UBERON:0000955;4.13e-32;68!UBERON:0001017;4.61e-32;75!UBERON:0001016;2.73e-25;83!UBERON:0001871;3.86e-24;6!UBERON:0002420;2.65e-23;9!UBERON:0007245;2.65e-23;9!UBERON:0010009;2.65e-23;9!UBERON:0010011;2.65e-23;9!UBERON:0000454;2.65e-23;9!UBERON:0000125;1.55e-22;9!UBERON:0002308;1.55e-22;9!UBERON:0000200;1.67e-21;6!UBERON:0002021;2.55e-18;5!UBERON:0001872;4.63e-18;5!UBERON:0000349;1.79e-17;5!UBERON:0009663;8.56e-17;7!UBERON:0000369;3.00e-14;4!UBERON:0002435;3.00e-14;4!UBERON:0000204;3.00e-14;4!UBERON:0011216;2.15e-13;132!UBERON:0001870;1.03e-11;3!UBERON:0005383;3.88e-11;3!UBERON:0005382;3.88e-11;3!UBERON:0007023;4.30e-10;114!UBERON:0002298;1.03e-08;6!UBERON:0001876;2.01e-08;2!UBERON:0002702;2.67e-08;2!UBERON:0002771;3.03e-08;2!UBERON:0001873;7.51e-08;2!UBERON:0001954;1.21e-07;2!UBERON:0003022;1.21e-07;2!UBERON:0002421;1.21e-07;2!UBERON:0002600;1.21e-07;2!UBERON:0002148;1.59e-07;2!UBERON:0006331;1.59e-07;2!UBERON:0009662;1.59e-07;2!UBERON:0001897;2.01e-07;2!UBERON:0010225;2.01e-07;2!UBERON:0010314;2.43e-07;132!UBERON:0001875;3.63e-07;2!UBERON:0006514;3.63e-07;2 | |ontology_enrichment_development_v019=UBERON:0006601;2.08e-16;82!UBERON:0010122;7.51e-08;2 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;6.57e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.43e-09,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;4.37e-80;32!UBERON:0002619;5.24e-77;22!UBERON:0003528;1.44e-76;34!UBERON:0002020;1.44e-76;34!UBERON:0002791;4.01e-75;32!UBERON:0001893;7.16e-72;34!UBERON:0001950;6.61e-71;20!UBERON:0000956;2.19e-67;25!UBERON:0000203;2.19e-67;25!UBERON:0002780;3.60e-59;41!UBERON:0001890;3.60e-59;41!UBERON:0000073;5.32e-41;53!UBERON:0002616;5.32e-41;53!UBERON:0000955;4.13e-32;68!UBERON:0001017;4.61e-32;75!UBERON:0001016;2.73e-25;83!UBERON:0001871;3.86e-24;6!UBERON:0002420;2.65e-23;9!UBERON:0007245;2.65e-23;9!UBERON:0010009;2.65e-23;9!UBERON:0010011;2.65e-23;9!UBERON:0000454;2.65e-23;9!UBERON:0000125;1.55e-22;9!UBERON:0002308;1.55e-22;9!UBERON:0000200;1.67e-21;6!UBERON:0002021;2.55e-18;5!UBERON:0001872;4.63e-18;5!UBERON:0000349;1.79e-17;5!UBERON:0009663;8.56e-17;7!UBERON:0000369;3.00e-14;4!UBERON:0002435;3.00e-14;4!UBERON:0000204;3.00e-14;4!UBERON:0011216;2.15e-13;132!UBERON:0001870;1.03e-11;3!UBERON:0005383;3.88e-11;3!UBERON:0005382;3.88e-11;3!UBERON:0007023;4.30e-10;114!UBERON:0002298;1.03e-08;6!UBERON:0001876;2.01e-08;2!UBERON:0002702;2.67e-08;2!UBERON:0002771;3.03e-08;2!UBERON:0001873;7.51e-08;2!UBERON:0001954;1.21e-07;2!UBERON:0003022;1.21e-07;2!UBERON:0002421;1.21e-07;2!UBERON:0002600;1.21e-07;2!UBERON:0002148;1.59e-07;2!UBERON:0006331;1.59e-07;2!UBERON:0009662;1.59e-07;2!UBERON:0001897;2.01e-07;2!UBERON:0010225;2.01e-07;2!UBERON:0010314;2.43e-07;132!UBERON:0001875;3.63e-07;2!UBERON:0006514;3.63e-07;2 | |||
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| ||
|short_description=p4@VSTM2A | |short_description=p4@VSTM2A | ||
}} | }} |
Latest revision as of 00:02, 19 September 2015
Short description: | p4@VSTM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VSTM2A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -31bp_to_ENST00000404951_5end |
EntrezGene: | VSTM2A |
HGNC: | 28499 |
UniProt: | B5MCX6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.43e-09 | 6 |