FFCP PHASE1:Hg19::chrX:110187799..110187810,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:110187799..110187810,+ to FFCP PHASE1:Hg19::chrX:110187799..110187810,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5063 | |EntrezGene=5063 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8592 | |HGNC=8592 | ||
|TSSclassifier=strong | |||
|UniProt=B2RCU6,O75914 | |UniProt=B2RCU6,O75914 | ||
|association_with_transcript=286bp_to_ENST00000425146,ENST00000446737,NM_001128166,NM_001128167,uc010npt.1,uc010npu.1_5end | |||
|cluster_id=chrX:110187799..110187810,+ | |||
|coexpression_cluster_id=C1552 | |||
|description=CAGE_peak_5_at_PAK3_5end | |||
|id=chrX:110187799..110187810,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.19e-09;2!UBERON:0006601;4.18e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.23e-60!57;UBERON:0005068!8.23e-60!57;UBERON:0006241!8.23e-60!57;UBERON:0007135!8.23e-60!57;UBERON:0001017!6.74e-53!82;UBERON:0005743!7.78e-52!86;UBERON:0003080!1.31e-51!42;UBERON:0007023!9.06e-51!115;UBERON:0002780!4.34e-50!41;UBERON:0001890!4.34e-50!41;UBERON:0006240!4.34e-50!41;UBERON:0002616!2.11e-49!59;UBERON:0000073!2.57e-49!94;UBERON:0001016!2.57e-49!94;UBERON:0001893!1.44e-48!34;UBERON:0002020!1.91e-48!34;UBERON:0003528!1.91e-48!34;UBERON:0002791!1.08e-46!33;UBERON:0001869!5.10e-46!32;UBERON:0000956!1.54e-45!25;UBERON:0000203!1.54e-45!25;UBERON:0003075!6.19e-44!86;UBERON:0007284!6.19e-44!86;UBERON:0000955!9.78e-44!69;UBERON:0006238!9.78e-44!69;UBERON:0002346!2.84e-41!90;UBERON:0002619!6.73e-41!22;UBERON:0001950!1.76e-37!20;UBERON:0003056!5.56e-36!61;UBERON:0004121!5.98e-31!169;UBERON:0000924!8.53e-30!173;UBERON:0006601!8.53e-30!173;UBERON:0000033!5.63e-27!123;UBERON:0000153!3.96e-26!129;UBERON:0007811!3.96e-26!129;UBERON:0000025!2.65e-15!194;UBERON:0001871!7.60e-15!7;UBERON:0004111!1.06e-14!241;UBERON:0002298!2.87e-13!8;UBERON:0000200!5.44e-12!6;UBERON:0000477!1.33e-11!286;UBERON:0000483!1.37e-11!309;UBERON:0000119!2.65e-11!312;UBERON:0000064!6.47e-11!219;UBERON:0001872!1.12e-10!5;UBERON:0000475!1.47e-10!365;UBERON:0002021!5.44e-10!5;UBERON:0000349!5.44e-10!5;UBERON:0003076!5.57e-10!15;UBERON:0003057!5.57e-10!15;UBERON:0000922!1.23e-09!612;UBERON:0000062!1.54e-09!511;UBERON:0000481!2.41e-09!347;UBERON:0002050!5.16e-09!605;UBERON:0005423!5.16e-09!605;UBERON:0000923!1.51e-08!604;UBERON:0005291!1.51e-08!604;UBERON:0006598!1.51e-08!604;UBERON:0002532!1.51e-08!604;UBERON:0000467!2.63e-08!625;UBERON:0000480!2.99e-08!626;UBERON:0000468!5.66e-08!659;UBERON:0002771!6.65e-07!3;UBERON:0006947!9.18e-07!3;UBERON:0004054!9.18e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;9.27e-65;25!UBERON:0000203;9.27e-65;25!UBERON:0002619;9.69e-60;22!UBERON:0001869;2.77e-54;32!UBERON:0001950;4.97e-52;20!UBERON:0002791;1.11e-48;32!UBERON:0001893;2.05e-48;34!UBERON:0003528;4.46e-45;34!UBERON:0002020;4.46e-45;34!UBERON:0002780;1.59e-39;41!UBERON:0001890;1.59e-39;41!UBERON:0000073;1.71e-29;53!UBERON:0002616;1.71e-29;53!UBERON:0001872;2.94e-23;5!UBERON:0000200;7.88e-19;6!UBERON:0000955;7.76e-17;68!UBERON:0001017;1.03e-15;75!UBERON:0002021;2.17e-14;5!UBERON:0000349;2.17e-14;5!UBERON:0001016;2.50e-14;83!UBERON:0006947;1.27e-13;3!UBERON:0004054;1.27e-13;3!UBERON:0007023;7.18e-12;114!UBERON:0000007;7.16e-11;2!UBERON:0001871;1.62e-10;6!UBERON:0005904;2.41e-10;4!UBERON:0002771;5.05e-10;2!UBERON:0003135;7.81e-10;11!UBERON:0001954;1.19e-09;2!UBERON:0003022;1.19e-09;2!UBERON:0002421;1.19e-09;2!UBERON:0002600;1.19e-09;2!UBERON:0001870;2.51e-07;3!UBERON:0011216;2.85e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,8.56e-65,25;UBERON:0000203,8.56e-65,25;UBERON:0001869,4.55e-61,32;UBERON:0002619,4.88e-60,22;UBERON:0001893,2.82e-57,34;UBERON:0002780,9.91e-57,41;UBERON:0001890,9.91e-57,41;UBERON:0003080,9.91e-57,41;UBERON:0006240,9.91e-57,41;UBERON:0002791,3.06e-55,32;UBERON:0001950,3.13e-52,20;UBERON:0003528,8.51e-52,34;UBERON:0002020,8.51e-52,34;UBERON:0000073,7.75e-51,53;UBERON:0002616,7.75e-51,53;UBERON:0001049,7.75e-48,56;UBERON:0005068,7.75e-48,56;UBERON:0006241,7.75e-48,56;UBERON:0007135,7.75e-48,56;UBERON:0001017,3.61e-42,81;UBERON:0000955,4.74e-41,68;UBERON:0006238,4.74e-41,68;UBERON:0001016,4.21e-40,89;UBERON:0003056,1.42e-36,61;UBERON:0007023,1.04e-33,114;UBERON:0003075,6.38e-31,82;UBERON:0007284,6.38e-31,82;UBERON:0002346,3.23e-29,86;UBERON:0001872,2.47e-23,5;UBERON:0010371,3.71e-23,104;UBERON:0010314,2.17e-20,132;UBERON:0004121,2.65e-19,171;UBERON:0000924,2.65e-19,171;UBERON:0006601,2.65e-19,171;UBERON:0000200,5.15e-19,6;UBERON:0011216,1.01e-16,223;UBERON:0002021,1.43e-14,5;UBERON:0000349,1.53e-14,5;UBERON:0006947,5.34e-14,3;UBERON:0004054,5.34e-14,3;UBERON:0004111,5.16e-11,240;UBERON:0000025,6.97e-11,192;UBERON:0000007,7.90e-11,2;UBERON:0005904,1.27e-10,4;UBERON:0001871,1.33e-10,6;UBERON:0002771,4.04e-10,2;UBERON:0003135,4.97e-10,11;UBERON:0001954,9.12e-10,2;UBERON:0003022,9.12e-10,2;UBERON:0002421,9.12e-10,2;UBERON:0002600,9.12e-10,2;UBERON:0001870,3.08e-07,3;UBERON:0000923,5.18e-07,560;UBERON:0010316,5.18e-07,560;UBERON:0005291,5.18e-07,560;UBERON:0006598,5.18e-07,560;UBERON:0010317,5.18e-07,560;UBERON:0002532,5.18e-07,560;UBERON:0002050,6.71e-07,564 | |||
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| ||
|short_description=p5@PAK3 | |||
}} | }} |
Latest revision as of 01:18, 19 September 2015
Short description: | p5@PAK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PAK3_5end |
Coexpression cluster: | C1552_parietal_pituitary_small_hippocampus_duodenum_temporal_occipital |
Association with transcript: | 286bp_to_ENST00000425146, ENST00000446737, NM_001128166, NM_001128167, uc010npt.1, uc010npu.1_5end |
EntrezGene: | PAK3 |
HGNC: | 8592 |
UniProt: | B2RCU6O75914 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data