FFCP PHASE1:Hg19::chr6:53976259..53976270,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:53976259..53976270,+ to FFCP PHASE1:Hg19::chr6:53976259..53976270,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90523 | |EntrezGene=90523 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21355 | |HGNC=21355 | ||
|TSSclassifier=strong | |||
|UniProt=A6NDT1,C9JSN1,Q5VWP4 | |UniProt=A6NDT1,C9JSN1,Q5VWP4 | ||
|association_with_transcript=13bp_to_ENST00000358276,ENST00000370878,ENST00000502396_5end | |||
|cluster_id=chr6:53976259..53976270,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_MLIP_5end | |||
|id=chr6:53976259..53976270,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.70e-19!24;CL:0000071!6.43e-16!18;CL:0002546!6.43e-16!18;CL:0002543!1.45e-13!6;CL:0000115!2.09e-12!35;CL:0002618!3.30e-10!3;CL:0002078!2.87e-09!44;CL:1000413!1.34e-08!9;CL:0002549!4.74e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002543;8.41e-18;6!CL:0002618;1.52e-09;3!CL:0002139;2.55e-09;24!CL:0000071;5.86e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,8.79e-18,6;CL:0002618,1.52e-09,3;CL:0002139,2.59e-09,24;CL:0000071,6.34e-09,18;CL:0002546,6.34e-09,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.04e-09;82!CL:0002546;5.86e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!6.92e-55!22;UBERON:0001950!1.09e-54!20;UBERON:0000956!1.22e-52!25;UBERON:0000203!1.22e-52!25;UBERON:0001893!1.23e-49!34;UBERON:0002020!3.70e-49!34;UBERON:0003528!3.70e-49!34;UBERON:0001869!7.36e-49!32;UBERON:0001017!9.05e-49!82;UBERON:0002616!1.66e-47!59;UBERON:0002791!8.76e-47!33;UBERON:0001049!3.08e-46!57;UBERON:0005068!3.08e-46!57;UBERON:0006241!3.08e-46!57;UBERON:0007135!3.08e-46!57;UBERON:0005743!4.38e-46!86;UBERON:0000955!1.89e-44!69;UBERON:0006238!1.89e-44!69;UBERON:0000073!7.40e-41!94;UBERON:0001016!7.40e-41!94;UBERON:0002780!3.19e-40!41;UBERON:0001890!3.19e-40!41;UBERON:0006240!3.19e-40!41;UBERON:0003080!3.97e-39!42;UBERON:0002346!1.09e-36!90;UBERON:0003075!3.10e-34!86;UBERON:0007284!3.10e-34!86;UBERON:0003056!2.98e-27!61;UBERON:0000033!1.93e-24!123;UBERON:0007023!7.71e-24!115;UBERON:0000153!6.84e-23!129;UBERON:0007811!6.84e-23!129;UBERON:0000924!1.13e-21!173;UBERON:0006601!1.13e-21!173;UBERON:0000025!2.91e-21!194;UBERON:0000200!9.66e-21!6;UBERON:0001871!1.95e-20!7;UBERON:0004121!7.62e-20!169;UBERON:0004111!4.10e-18!241;UBERON:0002021!9.74e-17!5;UBERON:0000477!2.77e-16!286;UBERON:0001986!6.43e-16!18;UBERON:0004638!6.43e-16!18;UBERON:0004852!6.43e-16!18;UBERON:0000119!6.22e-13!312;UBERON:0000487!1.22e-12!22;UBERON:0000483!2.20e-12!309;UBERON:0001638!2.81e-12!9;UBERON:0003920!2.81e-12!9;UBERON:0004582!2.81e-12!9;UBERON:0001872!2.44e-11!5;UBERON:0002771!3.29e-11!3;UBERON:0000349!4.19e-11!5;UBERON:0006914!7.09e-11!25;UBERON:0002066!3.99e-10!5;UBERON:0000064!4.11e-09!219;UBERON:0000988!4.30e-09!3;UBERON:0002298!8.12e-09!8;UBERON:0003076!1.28e-08!15;UBERON:0003057!1.28e-08!15;UBERON:0003915!1.34e-08!9;UBERON:0004700!1.34e-08!9;UBERON:0001917!1.34e-08!9;UBERON:0001870!3.06e-08!2;UBERON:0004733!3.92e-08!12;UBERON:0002028!3.92e-08!12;UBERON:0007277!3.92e-08!12;UBERON:0001876!6.88e-08!2;UBERON:0004732!1.84e-07!13;UBERON:0003947!4.74e-07!2;UBERON:0005629!4.74e-07!2;UBERON:0005358!4.74e-07!2;UBERON:0001886!4.74e-07!2;UBERON:0004086!4.74e-07!2;UBERON:0005282!4.74e-07!2;UBERON:0005281!4.74e-07!2;UBERON:0002360!7.53e-07!2;UBERON:0000094!7.53e-07!2;UBERON:0007645!7.53e-07!2;UBERON:0003127!8.01e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.20e-113;22!UBERON:0001950;1.60e-112;20!UBERON:0000956;7.15e-100;25!UBERON:0000203;7.15e-100;25!UBERON:0001869;3.42e-85;32!UBERON:0001893;5.67e-77;34!UBERON:0002791;1.51e-76;32!UBERON:0003528;2.99e-70;34!UBERON:0002020;2.99e-70;34!UBERON:0002780;1.09e-51;41!UBERON:0001890;1.09e-51;41!UBERON:0000200;6.26e-41;6!UBERON:0001871;2.33e-34;6!UBERON:0002021;5.31e-33;5!UBERON:0000073;2.16e-31;53!UBERON:0002616;2.16e-31;53!UBERON:0001872;4.20e-22;5!UBERON:0001870;1.01e-21;3!UBERON:0000349;1.89e-21;5!UBERON:0000955;4.99e-19;68!UBERON:0001017;1.92e-16;75!UBERON:0002702;5.42e-15;2!UBERON:0002771;7.40e-15;2!UBERON:0001876;1.93e-14;2!UBERON:0001016;1.88e-13;83!UBERON:0001638;6.19e-12;9!UBERON:0003920;6.19e-12;9!UBERON:0004582;6.19e-12;9!UBERON:0004638;5.86e-09;18!UBERON:0001986;5.86e-09;18!UBERON:0004852;5.86e-09;18!UBERON:0002902;2.27e-08;1!UBERON:0002022;2.27e-08;1!UBERON:0009899;2.27e-08;1!UBERON:0002581;3.45e-08;1!UBERON:0007190;3.45e-08;1!UBERON:0001882;5.22e-08;1!UBERON:0003112;5.22e-08;1!UBERON:0011158;5.22e-08;1!UBERON:0003128;5.22e-08;1!UBERON:0005403;5.22e-08;1!UBERON:0001703;5.22e-08;1!UBERON:0002241;5.22e-08;1!UBERON:0007023;2.10e-07;114!UBERON:0000487;2.72e-07;22!UBERON:0002420;3.04e-07;9!UBERON:0007245;3.04e-07;9!UBERON:0010009;3.04e-07;9!UBERON:0010011;3.04e-07;9!UBERON:0000454;3.04e-07;9!UBERON:0011216;8.07e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.98e-113,22;UBERON:0001950,1.99e-112,20;UBERON:0000956,9.35e-100,25;UBERON:0000203,9.35e-100,25;UBERON:0001869,1.09e-94,32;UBERON:0001893,4.78e-89,34;UBERON:0002791,5.52e-86,32;UBERON:0003528,7.57e-81,34;UBERON:0002020,7.57e-81,34;UBERON:0002780,1.57e-73,41;UBERON:0001890,1.57e-73,41;UBERON:0003080,1.57e-73,41;UBERON:0006240,1.57e-73,41;UBERON:0000073,2.79e-56,53;UBERON:0002616,2.79e-56,53;UBERON:0001049,4.22e-53,56;UBERON:0005068,4.22e-53,56;UBERON:0006241,4.22e-53,56;UBERON:0007135,4.22e-53,56;UBERON:0003056,1.74e-48,61;UBERON:0000955,1.30e-46,68;UBERON:0006238,1.30e-46,68;UBERON:0000200,4.61e-41,6;UBERON:0001017,1.22e-38,81;UBERON:0003075,3.67e-35,82;UBERON:0007284,3.67e-35,82;UBERON:0001871,1.75e-34,6;UBERON:0001016,1.95e-34,89;UBERON:0002346,2.37e-33,86;UBERON:0002021,8.77e-33,5;UBERON:0010371,6.56e-27,104;UBERON:0010314,1.77e-22,132;UBERON:0007023,4.56e-22,114;UBERON:0001872,4.69e-22,5;UBERON:0001870,8.52e-22,3;UBERON:0000349,1.45e-21,5;UBERON:0000025,1.24e-20,192;UBERON:0004111,5.04e-17,240;UBERON:0004121,3.90e-16,171;UBERON:0000924,3.90e-16,171;UBERON:0006601,3.90e-16,171;UBERON:0002702,4.56e-15,2;UBERON:0002771,7.40e-15,2;UBERON:0001876,1.47e-14,2;UBERON:0011216,1.36e-12,223;UBERON:0001638,6.37e-12,9;UBERON:0003920,6.37e-12,9;UBERON:0004582,6.37e-12,9;UBERON:0000483,3.78e-11,306;UBERON:0000119,5.41e-11,309;UBERON:0004638,6.34e-09,18;UBERON:0001986,6.34e-09,18;UBERON:0004852,6.34e-09,18;UBERON:0002022,2.52e-08,1;UBERON:0002902,2.71e-08,1;UBERON:0009899,2.71e-08,1;UBERON:0007190,3.11e-08,1;UBERON:0002581,3.34e-08,1;UBERON:0001882,4.40e-08,1;UBERON:0005403,4.40e-08,1;UBERON:0003112,6.19e-08,1;UBERON:0011158,6.19e-08,1;UBERON:0003128,6.19e-08,1;UBERON:0001703,6.19e-08,1;UBERON:0002241,6.19e-08,1;UBERON:0004761,6.19e-08,1;UBERON:0009617,6.19e-08,1;UBERON:0002420,2.64e-07,9;UBERON:0007245,2.64e-07,9;UBERON:0010009,2.64e-07,9;UBERON:0010011,2.64e-07,9;UBERON:0000454,2.64e-07,9;UBERON:0000487,2.90e-07,22 | |||
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| ||
|short_description=p5@MLIP | |||
}} | }} |
Latest revision as of 08:08, 19 September 2015
Short description: | p5@MLIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MLIP_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 13bp_to_ENST00000358276, ENST00000370878, ENST00000502396_5end |
EntrezGene: | MLIP |
HGNC: | 21355 |
UniProt: | A6NDT1C9JSN1Q5VWP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 8.79e-18 | 6 |
endothelial cell of umbilical vein | 1.52e-09 | 3 |
endothelial cell of vascular tree | 2.59e-09 | 24 |
blood vessel endothelial cell | 6.34e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.34e-09 | 18 |