FFCP PHASE1:Hg19::chr12:58119116..58119120,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116986 | |EntrezGene=116986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=16921 | |HGNC=16921 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=327bp_to_ENST00000548410,uc001spo.1_5end | |association_with_transcript=327bp_to_ENST00000548410,uc001spo.1_5end | ||
|cluster_id=chr12:58119116..58119120,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_2_at_AGAP2_5end | |description=CAGE_peak_2_at_AGAP2_5end | ||
|id=chr12:58119116..58119120,- | |id=chr12:58119116..58119120,- | ||
|ontology_enrichment_celltype=CL:0000542!1.25e-12!53;CL:0000051!1.25e-12!53;CL:0000037!3.16e-12!172;CL:0000566!3.16e-12!172;CL:0000838!4.31e-12!52;CL:0000988!9.38e-12!182;CL:0002032!1.34e-10!165;CL:0000837!1.34e-10!165;CL:0000738!8.21e-08!140;CL:0002087!3.23e-07!119 | |ontology_enrichment_celltype=CL:0000542!1.25e-12!53;CL:0000051!1.25e-12!53;CL:0000037!3.16e-12!172;CL:0000566!3.16e-12!172;CL:0000838!4.31e-12!52;CL:0000988!9.38e-12!182;CL:0002032!1.34e-10!165;CL:0000837!1.34e-10!165;CL:0000738!8.21e-08!140;CL:0002087!3.23e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000084;9.52e-09;25!CL:0000791;7.34e-07;18!CL:0000789;7.34e-07;18!CL:0002419;7.34e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,7.39e-09,25;CL:0000827,7.39e-09,25;CL:0000838,2.22e-07,52;CL:0000542,3.55e-07,53;CL:0000051,3.55e-07,53;CL:0000791,6.16e-07,18;CL:0000789,6.16e-07,18;CL:0002420,6.16e-07,18;CL:0002419,6.16e-07,18;CL:0000790,6.16e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.80e-09;82!UBERON:0006215;9.29e-09;3!CL:0000790;7.34e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!3.64e-10!51;DOID:0060083!3.64e-10!51;DOID:1240!4.98e-08!39 | |ontology_enrichment_disease=DOID:2531!3.64e-10!51;DOID:0060083!3.64e-10!51;DOID:1240!4.98e-08!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.14e-26!57;UBERON:0005068!4.14e-26!57;UBERON:0006241!4.14e-26!57;UBERON:0007135!4.14e-26!57;UBERON:0007023!5.18e-26!115;UBERON:0001017!1.22e-23!82;UBERON:0002020!3.26e-23!34;UBERON:0003528!3.26e-23!34;UBERON:0001893!4.12e-23!34;UBERON:0002780!5.93e-23!41;UBERON:0001890!5.93e-23!41;UBERON:0006240!5.93e-23!41;UBERON:0000955!8.43e-23!69;UBERON:0006238!8.43e-23!69;UBERON:0001869!2.24e-22!32;UBERON:0002791!2.61e-22!33;UBERON:0000073!3.66e-22!94;UBERON:0001016!3.66e-22!94;UBERON:0003080!4.79e-22!42;UBERON:0002616!5.09e-22!59;UBERON:0005743!1.73e-21!86;UBERON:0002619!6.18e-20!22;UBERON:0001950!5.43e-18!20;UBERON:0003075!1.43e-17!86;UBERON:0007284!1.43e-17!86;UBERON:0002346!2.08e-17!90;UBERON:0000956!1.95e-16!25;UBERON:0000203!1.95e-16!25;UBERON:0003056!2.28e-12!61;UBERON:0000153!3.17e-09!129;UBERON:0007811!3.17e-09!129;UBERON:0000033!5.15e-09!123;UBERON:0002420!6.26e-09!9;UBERON:0007245!6.26e-09!9;UBERON:0010009!6.26e-09!9;UBERON:0010011!6.26e-09!9;UBERON:0000454!6.26e-09!9;UBERON:0000924!2.16e-08!173;UBERON:0006601!2.16e-08!173;UBERON:0002308!2.66e-08!9;UBERON:0000125!2.66e-08!9;UBERON:0004121!2.81e-08!169;UBERON:0000178!5.05e-07!15;UBERON:0000179!5.05e-07!15;UBERON:0000463!5.05e-07!15;UBERON:0009663!5.62e-07!7 | |ontology_enrichment_uberon=UBERON:0001049!4.14e-26!57;UBERON:0005068!4.14e-26!57;UBERON:0006241!4.14e-26!57;UBERON:0007135!4.14e-26!57;UBERON:0007023!5.18e-26!115;UBERON:0001017!1.22e-23!82;UBERON:0002020!3.26e-23!34;UBERON:0003528!3.26e-23!34;UBERON:0001893!4.12e-23!34;UBERON:0002780!5.93e-23!41;UBERON:0001890!5.93e-23!41;UBERON:0006240!5.93e-23!41;UBERON:0000955!8.43e-23!69;UBERON:0006238!8.43e-23!69;UBERON:0001869!2.24e-22!32;UBERON:0002791!2.61e-22!33;UBERON:0000073!3.66e-22!94;UBERON:0001016!3.66e-22!94;UBERON:0003080!4.79e-22!42;UBERON:0002616!5.09e-22!59;UBERON:0005743!1.73e-21!86;UBERON:0002619!6.18e-20!22;UBERON:0001950!5.43e-18!20;UBERON:0003075!1.43e-17!86;UBERON:0007284!1.43e-17!86;UBERON:0002346!2.08e-17!90;UBERON:0000956!1.95e-16!25;UBERON:0000203!1.95e-16!25;UBERON:0003056!2.28e-12!61;UBERON:0000153!3.17e-09!129;UBERON:0007811!3.17e-09!129;UBERON:0000033!5.15e-09!123;UBERON:0002420!6.26e-09!9;UBERON:0007245!6.26e-09!9;UBERON:0010009!6.26e-09!9;UBERON:0010011!6.26e-09!9;UBERON:0000454!6.26e-09!9;UBERON:0000924!2.16e-08!173;UBERON:0006601!2.16e-08!173;UBERON:0002308!2.66e-08!9;UBERON:0000125!2.66e-08!9;UBERON:0004121!2.81e-08!169;UBERON:0000178!5.05e-07!15;UBERON:0000179!5.05e-07!15;UBERON:0000463!5.05e-07!15;UBERON:0009663!5.62e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.92e-53;32!UBERON:0002619;2.76e-50;22!UBERON:0002791;1.38e-49;32!UBERON:0003528;4.34e-48;34!UBERON:0002020;4.34e-48;34!UBERON:0001893;1.08e-47;34!UBERON:0001950;3.51e-45;20!UBERON:0000956;1.08e-43;25!UBERON:0000203;1.08e-43;25!UBERON:0002780;6.64e-40;41!UBERON:0001890;6.64e-40;41!UBERON:0000073;2.07e-29;53!UBERON:0002616;2.07e-29;53!UBERON:0000955;6.73e-23;68!UBERON:0001017;5.20e-21;75!UBERON:0001016;4.60e-18;83!UBERON:0002420;9.44e-18;9!UBERON:0007245;9.44e-18;9!UBERON:0010009;9.44e-18;9!UBERON:0010011;9.44e-18;9!UBERON:0000454;9.44e-18;9!UBERON:0000200;6.52e-15;6!UBERON:0000349;4.85e-14;5!UBERON:0001871;1.62e-13;6!UBERON:0002021;2.72e-13;5!UBERON:0000125;4.30e-13;9!UBERON:0002308;4.30e-13;9!UBERON:0009663;7.92e-13;7!UBERON:0001872;9.78e-13;5!UBERON:0000369;9.82e-11;4!UBERON:0002435;9.82e-11;4!UBERON:0000204;9.82e-11;4!UBERON:0007023;5.65e-09;114!UBERON:0005383;1.62e-08;3!UBERON:0005382;1.62e-08;3!UBERON:0001870;1.82e-08;3!UBERON:0001876;9.00e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.60e-59,32;UBERON:0003528,1.28e-55,34;UBERON:0002020,1.28e-55,34;UBERON:0002780,1.31e-55,41;UBERON:0001890,1.31e-55,41;UBERON:0003080,1.31e-55,41;UBERON:0006240,1.31e-55,41;UBERON:0001893,1.34e-55,34;UBERON:0002791,2.14e-55,32;UBERON:0000073,2.05e-53,53;UBERON:0002616,2.05e-53,53;UBERON:0001049,7.48e-53,56;UBERON:0005068,7.48e-53,56;UBERON:0006241,7.48e-53,56;UBERON:0007135,7.48e-53,56;UBERON:0002619,2.11e-50,22;UBERON:0000955,1.18e-46,68;UBERON:0006238,1.18e-46,68;UBERON:0001950,2.66e-45,20;UBERON:0000956,8.52e-44,25;UBERON:0000203,8.52e-44,25;UBERON:0001017,6.17e-42,81;UBERON:0001016,9.63e-41,89;UBERON:0003056,3.01e-39,61;UBERON:0003075,6.59e-39,82;UBERON:0007284,6.59e-39,82;UBERON:0002346,1.41e-36,86;UBERON:0010371,2.59e-28,104;UBERON:0007023,7.04e-24,114;UBERON:0010314,2.31e-21,132;UBERON:0002420,8.61e-18,9;UBERON:0007245,8.61e-18,9;UBERON:0010009,8.61e-18,9;UBERON:0010011,8.61e-18,9;UBERON:0000454,8.61e-18,9;UBERON:0004121,8.91e-18,171;UBERON:0000924,8.91e-18,171;UBERON:0006601,8.91e-18,171;UBERON:0000200,9.35e-15,6;UBERON:0000349,5.01e-14,5;UBERON:0001871,2.17e-13,6;UBERON:0002021,2.38e-13,5;UBERON:0000125,4.12e-13,9;UBERON:0002308,4.12e-13,9;UBERON:0001872,5.44e-13,5;UBERON:0009663,7.40e-13,7;UBERON:0011216,7.60e-12,223;UBERON:0000369,8.08e-11,4;UBERON:0002435,8.08e-11,4;UBERON:0000204,8.08e-11,4;UBERON:0010082,8.08e-11,4;UBERON:0000025,4.86e-09,192;UBERON:0005383,1.28e-08,3;UBERON:0005382,1.28e-08,3;UBERON:0001870,1.97e-08,3;UBERON:0001876,8.78e-07,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.410502947249729,0.314843125254717,0,0,0.309632246632152,0,0,0,0.46480320348181,0.995184627411951,0.293600439334847,0,0.401088894940283,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0.290796477559129,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,1.75996244461323,0.546138611262131,0,1.28019066769952,0.800791974072025,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.983548850569165,1.57204305099666,1.64481199199607,0.501559486172034,0,0,0,1.33692548262208,0.294605907474837,0.221533894583621,0.541607727530031,2.94610035369053,2.9913649938772,1.80881695064044,2.76350017785848,0.289803085735052,0.444859689486181,0.802622484269139,2.09071047609954,0.793165398882963,0,0,0.759059076058509,0,0,0,0.301150238155546,0,0,1.4206635122641,1.64225599384209,2.41928091869679,2.94184215361858,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0.696518949197069,0.398873881556595,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.176096868026452,0.414656231081544,1.00883967391873,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,2.12961773587702,0.394061520403854,2.15627574859517,1.79680250791648,0,0,0.773288812777695,0.335032530668698,0.637938751653163,0.749007023947182,5.9832291840805,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,1.90585420366231,0.822724546172388,0.648473311192717,0,0.79312517629427,0.213648142254946,0,0,0.929015875628594,0.28853842595289,0.142283686696828,0.797131363644112,0.59873811429845,0,3.17510374085824,0.649243880549111,0.561594356226918,0.912938716132769,0,5.01268954180134,1.86220955581764,1.1241165257259,0.201799707191048,0.425846237690326,0,0.307240764308458,0,0,0.19538809540204,0,0,0,1.6653598399891,2.81974010175699,0,0,0.970884173996107,1.89453753271713,0,0,0,0,11.9297717731956,12.6602474769461,0,1.48323486804084,0.211125408127993,0,0.552567831062295,0,0.409074730008619,0.123084805461069,0,0,0,1.02314474045374,0,0,0,12.6013256992378,2.69027484669369,7.98455192004777,0.260427761085233,0,0,0,0,0,1.03423011972439,0.291604613383254,0.520874984799877,1.77148277162768,9.88890796728345,4.5774520895125,5.30780447669878,6.50204761697804,4.8264787373874,0,0,0,0,0,0.359030577639089,0,0,0.0915975934018623,0,0,1.56980256395025,0.332423363800313,0,0,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0,0,0,0.265372693510018,0.611030144933625,0.889563386041866,0.617819694732514,0.417687798021821,0.471807930864739,0,6.79366892603483,0.182454789215666,0,0,0,0,6.1214552326098,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0.416024019039416,0,0,0,0,0.343972064943233,0.19351266257817,0.0730893170861856,0,0.0969890164884194,0.882561266915003,0.451961481561065,0.274083849293502,0,3.29216138970569,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0.687219576995494,0.343189995723929,0,0,0,0.135904206073614,0.104602846312333,0,0,4.20294202096853,2.32739144116388,1.27746588066972,0,2.10309883423452,0.279282401272254,0.916641696046735,1.43574604915363,0.199679000498991,0,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0.423366660328922,8.74752658790234,12.530713362265,0,0.275078873194468,0,0,0,3.34122561619136,0,0,0,0,0,0.383830394638891,0.714695326373367,0,0.25426853765475,0,0,0,1.19730191562487,0.328370082997356,0,0.113312091520126,0,0,0.646414781807753,2.38018683136842,0,0,0,0,0.414239055347196,0.496166021811951,0.395223263795889,1.21792598380896,0,0,0,0,0,0,3.54427271986794,1.09823638411767,5.88397374320549,0.573409195690071,0.998361463831671,0.558867626472451,0,0,0,0.285465333544967,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46595555219346,0,0.132864840313363,0,0.655219697692825,0,0,0.19998739585493,0.320075189082423,0.344429959321631,0,0,0,0,0.895260599125562,0.431299245586727,0.314531883711793,1.31051565830417,0,0.212574920101683,0.495743057036009,0,0,0.15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| ||
|short_description=p2@AGAP2 | |short_description=p2@AGAP2 | ||
}} | }} |
Latest revision as of 15:59, 19 September 2015
Short description: | p2@AGAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AGAP2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 327bp_to_ENST00000548410, uc001spo.1_5end |
EntrezGene: | AGAP2 |
HGNC: | 16921 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 7.39e-09 | 25 |
pro-T cell | 7.39e-09 | 25 |
lymphoid lineage restricted progenitor cell | 2.22e-07 | 52 |
lymphocyte | 3.55e-07 | 53 |
common lymphoid progenitor | 3.55e-07 | 53 |
mature alpha-beta T cell | 6.16e-07 | 18 |
alpha-beta T cell | 6.16e-07 | 18 |
immature T cell | 6.16e-07 | 18 |
mature T cell | 6.16e-07 | 18 |
immature alpha-beta T cell | 6.16e-07 | 18 |