FFCP PHASE1:Hg19::chr1:205473772..205473783,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5129 | |EntrezGene=5129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8751 | |HGNC=8751 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000507067_5end | |association_with_transcript=-3bp_to_ENST00000507067_5end | ||
|cluster_id=chr1:205473772..205473783,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_3_at_CDK18_5end | |description=CAGE_peak_3_at_CDK18_5end | ||
|id=chr1:205473772..205473783,+ | |id=chr1:205473772..205473783,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.05e-11;82!UBERON:0006238;1.08e-07;10!UBERON:0006241;2.58e-07;3!UBERON:0003057;2.58e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.45e-28!115;UBERON:0001049!2.75e-17!57;UBERON:0005068!2.75e-17!57;UBERON:0006241!2.75e-17!57;UBERON:0007135!2.75e-17!57;UBERON:0005743!7.90e-17!86;UBERON:0000073!1.09e-16!94;UBERON:0001016!1.09e-16!94;UBERON:0001017!1.35e-16!82;UBERON:0000955!1.46e-16!69;UBERON:0006238!1.46e-16!69;UBERON:0002346!2.42e-14!90;UBERON:0002616!7.64e-14!59;UBERON:0003075!8.07e-14!86;UBERON:0007284!8.07e-14!86;UBERON:0003080!1.69e-13!42;UBERON:0002780!3.92e-13!41;UBERON:0001890!3.92e-13!41;UBERON:0006240!3.92e-13!41;UBERON:0001893!1.43e-11!34;UBERON:0002020!1.55e-11!34;UBERON:0003528!1.55e-11!34;UBERON:0002791!6.22e-11!33;UBERON:0000033!7.58e-11!123;UBERON:0000153!1.04e-10!129;UBERON:0007811!1.04e-10!129;UBERON:0000924!2.60e-10!173;UBERON:0006601!2.60e-10!173;UBERON:0001869!3.32e-10!32;UBERON:0003056!3.81e-10!61;UBERON:0004121!8.03e-10!169;UBERON:0000062!4.56e-09!511;UBERON:0001950!2.48e-07!20;UBERON:0002619!3.05e-07!22;UBERON:0002308!6.59e-07!9;UBERON:0000125!6.59e-07!9;UBERON:0000956!8.27e-07!25;UBERON:0000203!8.27e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!1.45e-28!115;UBERON:0001049!2.75e-17!57;UBERON:0005068!2.75e-17!57;UBERON:0006241!2.75e-17!57;UBERON:0007135!2.75e-17!57;UBERON:0005743!7.90e-17!86;UBERON:0000073!1.09e-16!94;UBERON:0001016!1.09e-16!94;UBERON:0001017!1.35e-16!82;UBERON:0000955!1.46e-16!69;UBERON:0006238!1.46e-16!69;UBERON:0002346!2.42e-14!90;UBERON:0002616!7.64e-14!59;UBERON:0003075!8.07e-14!86;UBERON:0007284!8.07e-14!86;UBERON:0003080!1.69e-13!42;UBERON:0002780!3.92e-13!41;UBERON:0001890!3.92e-13!41;UBERON:0006240!3.92e-13!41;UBERON:0001893!1.43e-11!34;UBERON:0002020!1.55e-11!34;UBERON:0003528!1.55e-11!34;UBERON:0002791!6.22e-11!33;UBERON:0000033!7.58e-11!123;UBERON:0000153!1.04e-10!129;UBERON:0007811!1.04e-10!129;UBERON:0000924!2.60e-10!173;UBERON:0006601!2.60e-10!173;UBERON:0001869!3.32e-10!32;UBERON:0003056!3.81e-10!61;UBERON:0004121!8.03e-10!169;UBERON:0000062!4.56e-09!511;UBERON:0001950!2.48e-07!20;UBERON:0002619!3.05e-07!22;UBERON:0002308!6.59e-07!9;UBERON:0000125!6.59e-07!9;UBERON:0000956!8.27e-07!25;UBERON:0000203!8.27e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.40e-18;41!UBERON:0001890;1.40e-18;41!UBERON:0001893;1.79e-17;34!UBERON:0002619;4.88e-17;22!UBERON:0001950;8.99e-17;20!UBERON:0003528;3.51e-16;34!UBERON:0002020;3.51e-16;34!UBERON:0002791;9.38e-16;32!UBERON:0001869;1.21e-15;32!UBERON:0000073;1.42e-15;53!UBERON:0002616;1.42e-15;53!UBERON:0000956;1.51e-14;25!UBERON:0000203;1.51e-14;25!UBERON:0001017;6.42e-13;75!UBERON:0000955;8.41e-12;68!UBERON:0007023;4.99e-11;114!UBERON:0001016;5.50e-11;83!UBERON:0002298;9.26e-09;6!UBERON:0000200;4.96e-08;6!UBERON:0000125;1.35e-07;9!UBERON:0002308;1.35e-07;9!UBERON:0002784;1.58e-07;4!UBERON:0002240;2.58e-07;3!UBERON:0005174;2.58e-07;3!UBERON:0001137;2.58e-07;3!UBERON:0003135;5.14e-07;11!UBERON:0000988;5.22e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.73e-38,114;UBERON:0001049,8.19e-33,56;UBERON:0005068,8.19e-33,56;UBERON:0006241,8.19e-33,56;UBERON:0007135,8.19e-33,56;UBERON:0001017,1.75e-31,81;UBERON:0000955,2.99e-31,68;UBERON:0006238,2.99e-31,68;UBERON:0002346,6.32e-29,86;UBERON:0001016,7.70e-29,89;UBERON:0000073,3.26e-28,53;UBERON:0002616,3.26e-28,53;UBERON:0003075,6.46e-28,82;UBERON:0007284,6.46e-28,82;UBERON:0002780,4.15e-26,41;UBERON:0001890,4.15e-26,41;UBERON:0003080,4.15e-26,41;UBERON:0006240,4.15e-26,41;UBERON:0010371,5.76e-23,104;UBERON:0010314,4.00e-21,132;UBERON:0001893,4.52e-21,34;UBERON:0003528,5.38e-21,34;UBERON:0002020,5.38e-21,34;UBERON:0003056,1.15e-20,61;UBERON:0002791,4.10e-18,32;UBERON:0001869,4.94e-18,32;UBERON:0002619,2.66e-17,22;UBERON:0001950,6.59e-17,20;UBERON:0004121,8.50e-17,171;UBERON:0000924,8.50e-17,171;UBERON:0006601,8.50e-17,171;UBERON:0000956,8.89e-15,25;UBERON:0000203,8.89e-15,25;UBERON:0011216,1.60e-11,223;UBERON:0000025,1.56e-09,192;UBERON:0004111,2.35e-09,240;UBERON:0002298,6.98e-09,6;UBERON:0000200,3.64e-08,6;UBERON:0003076,6.52e-08,15;UBERON:0003057,6.52e-08,15;UBERON:0000125,9.05e-08,9;UBERON:0002308,9.05e-08,9;UBERON:0002784,1.51e-07,4;UBERON:0002240,2.30e-07,3;UBERON:0005174,2.30e-07,3;UBERON:0001137,2.30e-07,3;UBERON:0000988,4.27e-07,3;UBERON:0000483,5.24e-07,306;UBERON:0003135,6.91e-07,11;UBERON:0000119,8.33e-07,309 | |||
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| ||
|short_description=p3@CDK18 | |short_description=p3@CDK18 | ||
}} | }} |
Latest revision as of 03:06, 20 September 2015
Short description: | p3@CDK18 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDK18_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -3bp_to_ENST00000507067_5end |
EntrezGene: | CDK18 |
HGNC: | 8751 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data