FFCP PHASE1:Hg19::chr6:89827720..89827805,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=135295 | |EntrezGene=135295 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21220 | |HGNC=21220 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WXF0,E5RJS0 | |UniProt=Q8WXF0,E5RJS0 | ||
|association_with_transcript=0bp_to_ENST00000452027,ENST00000475068,NM_080743,uc003pmy.3_5end | |association_with_transcript=0bp_to_ENST00000452027,ENST00000475068,NM_080743,uc003pmy.3_5end | ||
|cluster_id=chr6:89827720..89827805,- | |||
|description=CAGE_peak_1_at_SRSF12_5end | |description=CAGE_peak_1_at_SRSF12_5end | ||
|id=chr6:89827720..89827805,- | |id=chr6:89827720..89827805,- | ||
|ontology_enrichment_celltype=CL:0002319!3.60e-07!25 | |ontology_enrichment_celltype=CL:0002319!3.60e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.12e-09;10!CL:1000494;2.12e-09;10!CL:1000497;9.12e-08;17!CL:0002518;9.12e-08;17 | |ontology_enrichment_celltype_v019=CL:1000507;2.12e-09;10!CL:1000494;2.12e-09;10!CL:1000497;9.12e-08;17!CL:0002518;9.12e-08;17 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.19e-09,10;CL:1000494,1.19e-09,10;CL:1000497,5.80e-08,17;CL:0002518,5.80e-08,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.89e-11;82 | |ontology_enrichment_development_v019=UBERON:0006601;5.89e-11;82 | ||
|ontology_enrichment_disease=DOID:3095!1.37e-07!22;DOID:2994!1.37e-07!22;DOID:171!3.01e-07!10 | |ontology_enrichment_disease=DOID:3095!1.37e-07!22;DOID:2994!1.37e-07!22;DOID:171!3.01e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;1.29e-10;10!DOID:3095;3.17e-09;22!DOID:2994;3.17e-09;22!DOID:169;7.75e-07;6 | |ontology_enrichment_disease_v019=DOID:171;1.29e-10;10!DOID:3095;3.17e-09;22!DOID:2994;3.17e-09;22!DOID:169;7.75e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:171,1.14e-10,10;DOID:3095,3.48e-09,22;DOID:2994,3.48e-09,22;DOID:169,7.40e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.39e-41!94;UBERON:0001016!2.39e-41!94;UBERON:0002346!2.35e-38!90;UBERON:0005743!6.31e-38!86;UBERON:0001017!2.16e-36!82;UBERON:0003075!9.06e-36!86;UBERON:0007284!9.06e-36!86;UBERON:0001049!2.56e-31!57;UBERON:0005068!2.56e-31!57;UBERON:0006241!2.56e-31!57;UBERON:0007135!2.56e-31!57;UBERON:0000955!1.83e-30!69;UBERON:0006238!1.83e-30!69;UBERON:0002616!4.21e-29!59;UBERON:0000924!1.06e-28!173;UBERON:0006601!1.06e-28!173;UBERON:0003056!3.01e-28!61;UBERON:0004121!1.45e-26!169;UBERON:0003080!1.45e-25!42;UBERON:0002780!1.69e-25!41;UBERON:0001890!1.69e-25!41;UBERON:0006240!1.69e-25!41;UBERON:0000033!1.07e-22!123;UBERON:0001869!1.38e-22!32;UBERON:0001893!1.52e-22!34;UBERON:0002020!1.88e-22!34;UBERON:0003528!1.88e-22!34;UBERON:0002791!7.55e-22!33;UBERON:0000153!1.54e-21!129;UBERON:0007811!1.54e-21!129;UBERON:0000956!2.41e-18!25;UBERON:0000203!2.41e-18!25;UBERON:0002619!1.55e-16!22;UBERON:0001950!3.96e-15!20;UBERON:0000119!3.19e-14!312;UBERON:0000483!4.30e-14!309;UBERON:0007023!5.86e-14!115;UBERON:0000922!1.26e-11!612;UBERON:0000475!4.98e-11!365;UBERON:0002050!5.18e-10!605;UBERON:0005423!5.18e-10!605;UBERON:0000025!7.30e-10!194;UBERON:0000064!8.88e-10!219;UBERON:0000923!1.07e-09!604;UBERON:0005291!1.07e-09!604;UBERON:0006598!1.07e-09!604;UBERON:0002532!1.07e-09!604;UBERON:0000481!1.30e-09!347;UBERON:0000489!5.95e-09!32;UBERON:0000468!1.86e-08!659;UBERON:0000467!2.90e-07!625;UBERON:0002113!2.99e-07!27;UBERON:0003918!2.99e-07!27;UBERON:0005095!2.99e-07!27;UBERON:0007687!2.99e-07!27;UBERON:0004111!3.21e-07!241;UBERON:0000480!4.01e-07!626;UBERON:0003076!4.65e-07!15;UBERON:0003057!4.65e-07!15;UBERON:0000062!6.47e-07!511 | |ontology_enrichment_uberon=UBERON:0000073!2.39e-41!94;UBERON:0001016!2.39e-41!94;UBERON:0002346!2.35e-38!90;UBERON:0005743!6.31e-38!86;UBERON:0001017!2.16e-36!82;UBERON:0003075!9.06e-36!86;UBERON:0007284!9.06e-36!86;UBERON:0001049!2.56e-31!57;UBERON:0005068!2.56e-31!57;UBERON:0006241!2.56e-31!57;UBERON:0007135!2.56e-31!57;UBERON:0000955!1.83e-30!69;UBERON:0006238!1.83e-30!69;UBERON:0002616!4.21e-29!59;UBERON:0000924!1.06e-28!173;UBERON:0006601!1.06e-28!173;UBERON:0003056!3.01e-28!61;UBERON:0004121!1.45e-26!169;UBERON:0003080!1.45e-25!42;UBERON:0002780!1.69e-25!41;UBERON:0001890!1.69e-25!41;UBERON:0006240!1.69e-25!41;UBERON:0000033!1.07e-22!123;UBERON:0001869!1.38e-22!32;UBERON:0001893!1.52e-22!34;UBERON:0002020!1.88e-22!34;UBERON:0003528!1.88e-22!34;UBERON:0002791!7.55e-22!33;UBERON:0000153!1.54e-21!129;UBERON:0007811!1.54e-21!129;UBERON:0000956!2.41e-18!25;UBERON:0000203!2.41e-18!25;UBERON:0002619!1.55e-16!22;UBERON:0001950!3.96e-15!20;UBERON:0000119!3.19e-14!312;UBERON:0000483!4.30e-14!309;UBERON:0007023!5.86e-14!115;UBERON:0000922!1.26e-11!612;UBERON:0000475!4.98e-11!365;UBERON:0002050!5.18e-10!605;UBERON:0005423!5.18e-10!605;UBERON:0000025!7.30e-10!194;UBERON:0000064!8.88e-10!219;UBERON:0000923!1.07e-09!604;UBERON:0005291!1.07e-09!604;UBERON:0006598!1.07e-09!604;UBERON:0002532!1.07e-09!604;UBERON:0000481!1.30e-09!347;UBERON:0000489!5.95e-09!32;UBERON:0000468!1.86e-08!659;UBERON:0000467!2.90e-07!625;UBERON:0002113!2.99e-07!27;UBERON:0003918!2.99e-07!27;UBERON:0005095!2.99e-07!27;UBERON:0007687!2.99e-07!27;UBERON:0004111!3.21e-07!241;UBERON:0000480!4.01e-07!626;UBERON:0003076!4.65e-07!15;UBERON:0003057!4.65e-07!15;UBERON:0000062!6.47e-07!511 | ||
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| ||
|short_description=p1@SRSF12 | |short_description=p1@SRSF12 | ||
}} | }} |
Latest revision as of 03:16, 20 September 2015
Short description: | p1@SRSF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRSF12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000452027, ENST00000475068, NM_080743, uc003pmy.3_5end |
EntrezGene: | SRSF12 |
HGNC: | 21220 |
UniProt: | Q8WXF0E5RJS0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.19e-09 | 10 |
nephron tubule epithelial cell | 1.19e-09 | 10 |
kidney cell | 5.80e-08 | 17 |
kidney epithelial cell | 5.80e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.14e-10 | 10 |
germ cell and embryonal cancer | 3.48e-09 | 22 |
germ cell cancer | 3.48e-09 | 22 |
neuroendocrine tumor | 7.40e-07 | 6 |