FFCP PHASE1:Hg19::chr2:216300784..216300798,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt=E7ERA1,P02751,F8W7G7,E9PG29,E9PE77,Q6MZF4,Q6N084,Q9UQS6,Q6MZM7 | |UniProt=E7ERA1,P02751,F8W7G7,E9PG29,E9PE77,Q6MZF4,Q6N084,Q9UQS6,Q6MZM7 | ||
|association_with_transcript=0bp_to_ENST00000265313,ENST00000323926,ENST00000336916,ENST00000345488,ENST00000346544,ENST00000356005,ENST00000357009,ENST00000357867,ENST00000359671,ENST00000421182,ENST00000426059,ENST00000432072,ENST00000443816,ENST00000446046,NM_002026,NM_054034,NM_212474,NM_212476,NM_212478,NM_212482,uc002vfa.2,uc002vfb.2,uc002vfc.2,uc002vfd.2,uc002vfe.2,uc002vff.2,uc002vfg.2,uc002vfh.2,uc002vfi.2,uc002vfj.2,uc002vfl.2_5end | |association_with_transcript=0bp_to_ENST00000265313,ENST00000323926,ENST00000336916,ENST00000345488,ENST00000346544,ENST00000356005,ENST00000357009,ENST00000357867,ENST00000359671,ENST00000421182,ENST00000426059,ENST00000432072,ENST00000443816,ENST00000446046,NM_002026,NM_054034,NM_212474,NM_212476,NM_212478,NM_212482,uc002vfa.2,uc002vfb.2,uc002vfc.2,uc002vfd.2,uc002vfe.2,uc002vff.2,uc002vfg.2,uc002vfh.2,uc002vfi.2,uc002vfj.2,uc002vfl.2_5end | ||
|cluster_id=chr2:216300784..216300798,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_1_at_FN1_5end | |description=CAGE_peak_1_at_FN1_5end | ||
|id=chr2:216300784..216300798,- | |id=chr2:216300784..216300798,- | ||
|ontology_enrichment_celltype=CL:0000055!1.04e-38!180;CL:0000057!7.27e-25!75;CL:0000183!5.21e-16!59;CL:0000680!6.39e-16!57;CL:0000056!6.39e-16!57;CL:0000355!6.39e-16!57;CL:0000220!1.55e-15!246;CL:0002321!2.85e-15!248;CL:0000187!7.94e-15!54;CL:0000222!2.22e-14!119;CL:0000393!1.29e-12!60;CL:0000211!1.29e-12!60;CL:0002371!1.82e-11!591;CL:0002620!1.32e-10!23;CL:0000192!3.94e-10!42;CL:0000514!3.94e-10!42;CL:0000144!4.75e-10!625;CL:0000359!5.42e-09!32;CL:0002494!2.67e-08!16;CL:0002334!7.76e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.04e-38!180;CL:0000057!7.27e-25!75;CL:0000183!5.21e-16!59;CL:0000680!6.39e-16!57;CL:0000056!6.39e-16!57;CL:0000355!6.39e-16!57;CL:0000220!1.55e-15!246;CL:0002321!2.85e-15!248;CL:0000187!7.94e-15!54;CL:0000222!2.22e-14!119;CL:0000393!1.29e-12!60;CL:0000211!1.29e-12!60;CL:0002371!1.82e-11!591;CL:0002620!1.32e-10!23;CL:0000192!3.94e-10!42;CL:0000514!3.94e-10!42;CL:0000144!4.75e-10!625;CL:0000359!5.42e-09!32;CL:0002494!2.67e-08!16;CL:0002334!7.76e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.18e-10;23!CL:0000057;1.56e-10;73!CL:0000134;1.63e-10;55!CL:0000723;1.29e-09;61!CL:0000187;5.44e-09;55!CL:0000048;5.50e-09;58!CL:0002320;1.49e-08;188!CL:0000359;1.54e-08;32!CL:0002494;2.45e-08;16!CL:0000349;4.88e-08;19!CL:0000192;8.60e-08;43!CL:0000393;2.08e-07;61!CL:0000211;2.08e-07;61!CL:0000034;3.99e-07;69!CL:0002334;7.25e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.31e-25,76;CL:0000680,1.95e-16,58;CL:0000056,1.95e-16,58;CL:0000355,1.95e-16,58;CL:0002321,8.74e-16,250;CL:0000187,2.48e-15,55;CL:0000222,6.23e-15,121;CL:0000393,4.40e-13,61;CL:0000211,4.40e-13,61;CL:0002620,1.18e-10,23;CL:0000192,1.38e-10,43;CL:0000514,1.38e-10,43;CL:0000359,4.94e-09,32;CL:0002494,2.45e-08,16;CL:0000349,4.86e-08,19;CL:0002334,7.25e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000355;4.02e-09;58!CL:0000514;8.60e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!2.06e-21!143;UBERON:0000914!1.11e-20!83;UBERON:0002329!1.11e-20!83;UBERON:0003077!1.11e-20!83;UBERON:0003059!1.11e-20!83;UBERON:0007282!1.11e-20!83;UBERON:0009618!1.11e-20!83;UBERON:0007285!1.11e-20!83;UBERON:0000468!5.54e-20!659;UBERON:0004290!2.62e-18!70;UBERON:0003914!3.03e-18!118;UBERON:0000486!1.29e-17!82;UBERON:0000475!2.07e-17!365;UBERON:0004872!8.60e-17!84;UBERON:0002100!1.51e-16!216;UBERON:0000119!3.21e-16!312;UBERON:0000490!5.95e-16!138;UBERON:0000483!1.57e-15!309;UBERON:0001134!4.40e-15!61;UBERON:0002036!4.40e-15!61;UBERON:0003082!4.40e-15!61;UBERON:0002385!7.41e-15!63;UBERON:0001015!7.41e-15!63;UBERON:0000383!7.41e-15!63;UBERON:0002049!7.70e-15!79;UBERON:0007798!7.70e-15!79;UBERON:0000467!2.55e-14!625;UBERON:0000480!5.51e-14!626;UBERON:0000481!1.30e-12!347;UBERON:0004535!9.88e-12!110;UBERON:0000055!1.29e-11!69;UBERON:0001009!1.44e-11!113;UBERON:0001981!1.85e-11!60;UBERON:0007500!1.85e-11!60;UBERON:0004537!1.85e-11!60;UBERON:0006965!1.85e-11!60;UBERON:0003104!2.01e-11!238;UBERON:0009142!2.01e-11!238;UBERON:0001637!7.96e-11!42;UBERON:0003509!7.96e-11!42;UBERON:0004572!7.96e-11!42;UBERON:0000477!1.41e-10!286;UBERON:0003102!1.86e-10!95;UBERON:0002199!3.98e-10!45;UBERON:0002416!3.98e-10!45;UBERON:0000922!7.13e-10!612;UBERON:0002050!9.84e-10!605;UBERON:0005423!9.84e-10!605;UBERON:0000923!1.13e-09!604;UBERON:0005291!1.13e-09!604;UBERON:0006598!1.13e-09!604;UBERON:0002532!1.13e-09!604;UBERON:0004111!1.99e-09!241;UBERON:0002097!8.45e-09!40;UBERON:0004573!1.38e-08!33;UBERON:0004571!1.38e-08!33;UBERON:0000926!2.60e-08!448;UBERON:0004120!2.60e-08!448;UBERON:0006603!2.60e-08!448;UBERON:0000948!3.47e-08!24;UBERON:0005498!3.47e-08!24;UBERON:0004140!3.47e-08!24;UBERON:0009881!3.47e-08!24;UBERON:0004141!3.47e-08!24;UBERON:0003084!3.47e-08!24;UBERON:0007005!3.47e-08!24;UBERON:0004139!3.47e-08!24;UBERON:0004291!3.47e-08!24;UBERON:0004923!4.26e-08!57;UBERON:0000025!9.45e-08!194;UBERON:0007100!1.41e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.33e-08;42!UBERON:0003509;4.33e-08;42!UBERON:0004572;4.33e-08;42!UBERON:0002384;4.70e-08;198!UBERON:0004573;5.76e-08;33!UBERON:0004571;5.76e-08;33!UBERON:0002097;1.56e-07;41!UBERON:0000948;1.61e-07;22!UBERON:0002199;3.61e-07;46!UBERON:0002416;3.61e-07;46!UBERON:0007100;6.29e-07;25 | |||
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| ||
|short_description=p1@FN1 | |short_description=p1@FN1 | ||
}} | }} |
Latest revision as of 05:19, 20 September 2015
Short description: | p1@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000265313, ENST00000323926, ENST00000336916, ENST00000345488, ENST00000346544, ENST00000356005, ENST00000357009, ENST00000357867, ENST00000359671, ENST00000421182, ENST00000426059, ENST00000432072, ENST00000443816, ENST00000446046, NM_002026, NM_054034, NM_212474, NM_212476, NM_212478, NM_212482, uc002vfa.2, uc002vfb.2, uc002vfc.2, uc002vfd.2, uc002vfe.2, uc002vff.2, uc002vfg.2, uc002vfh.2, uc002vfi.2, uc002vfj.2, uc002vfl.2_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | E7ERA1P02751F8W7G7E9PG29E9PE77Q6MZF4Q6N084Q9UQS6Q6MZM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.31e-25 | 76 |
muscle precursor cell | 1.95e-16 | 58 |
myoblast | 1.95e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.95e-16 | 58 |
embryonic cell | 8.74e-16 | 250 |
muscle cell | 2.48e-15 | 55 |
mesodermal cell | 6.23e-15 | 121 |
electrically responsive cell | 4.40e-13 | 61 |
electrically active cell | 4.40e-13 | 61 |
skin fibroblast | 1.18e-10 | 23 |
smooth muscle cell | 1.38e-10 | 43 |
smooth muscle myoblast | 1.38e-10 | 43 |
vascular associated smooth muscle cell | 4.94e-09 | 32 |
cardiocyte | 2.45e-08 | 16 |
extraembryonic cell | 4.86e-08 | 19 |
preadipocyte | 7.25e-07 | 12 |