FFCP PHASE1:Hg19::chrX:18725758..18725784,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:18725758..18725784,+ to FFCP PHASE1:Hg19::chrX:18725758..18725784,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5475 | |EntrezGene=5475 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9243 | |HGNC=9243 | ||
|TSSclassifier=strong | |||
|UniProt=C9JY08,F8WC69,B7Z6R7 | |UniProt=C9JY08,F8WC69,B7Z6R7 | ||
|association_with_transcript=0bp_to_ENST00000472826,ENST00000496075,ENST00000544635,uc004cys.2,uc011mja.1_5end | |||
|cluster_id=chrX:18725758..18725784,+ | |||
|description=CAGE_peak_1_at_PPEF1_5end | |||
|id=chrX:18725758..18725784,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.47e-11;5!CL:0000946;1.36e-07;1!CL:0000786;1.36e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.36e-07,1;CL:0000786,1.36e-07,1;CL:0000980,1.36e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.38e-12;82!UBERON:0003056;6.86e-09;3!UBERON:0005425;6.01e-07;1 | |||
|ontology_enrichment_disease=DOID:169!4.74e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:171;7.69e-10;10!DOID:169;1.04e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,7.34e-10,10;DOID:169,9.35e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0002780!4.57e-57!41;UBERON:0001890!4.57e-57!41;UBERON:0006240!4.57e-57!41;UBERON:0003080!1.71e-55!42;UBERON:0000073!1.95e-51!94;UBERON:0001016!1.95e-51!94;UBERON:0001869!1.74e-50!32;UBERON:0001893!1.75e-50!34;UBERON:0002791!3.32e-48!33;UBERON:0001017!3.51e-48!82;UBERON:0005743!2.24e-45!86;UBERON:0002020!2.45e-43!34;UBERON:0003528!2.45e-43!34;UBERON:0001049!2.72e-43!57;UBERON:0005068!2.72e-43!57;UBERON:0006241!2.72e-43!57;UBERON:0007135!2.72e-43!57;UBERON:0000955!3.43e-43!69;UBERON:0006238!3.43e-43!69;UBERON:0003056!7.62e-43!61;UBERON:0001950!1.39e-42!20;UBERON:0002619!2.18e-42!22;UBERON:0002616!1.74e-41!59;UBERON:0000956!2.53e-40!25;UBERON:0000203!2.53e-40!25;UBERON:0003075!1.42e-34!86;UBERON:0007284!1.42e-34!86;UBERON:0002346!1.51e-34!90;UBERON:0000153!1.05e-25!129;UBERON:0007811!1.05e-25!129;UBERON:0000924!1.52e-25!173;UBERON:0006601!1.52e-25!173;UBERON:0004121!3.92e-25!169;UBERON:0000033!1.60e-23!123;UBERON:0007023!1.77e-21!115;UBERON:0001871!1.18e-14!7;UBERON:0000200!1.45e-14!6;UBERON:0001872!2.34e-12!5;UBERON:0002021!3.32e-12!5;UBERON:0002420!7.08e-12!9;UBERON:0007245!7.08e-12!9;UBERON:0010009!7.08e-12!9;UBERON:0010011!7.08e-12!9;UBERON:0000454!7.08e-12!9;UBERON:0000369!1.66e-09!4;UBERON:0002435!1.66e-09!4;UBERON:0000204!1.66e-09!4;UBERON:0010082!1.66e-09!4;UBERON:0000013!1.72e-08!5;UBERON:0002410!1.72e-08!5;UBERON:0000349!2.92e-08!5;UBERON:0001894!4.79e-08!7;UBERON:0006222!4.79e-08!7;UBERON:0002771!5.06e-08!3;UBERON:0000025!6.54e-08!194;UBERON:0009663!6.84e-08!7;UBERON:0005383!3.04e-07!3;UBERON:0005382!3.04e-07!3;UBERON:0000064!3.91e-07!219;UBERON:0000010!7.29e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.77e-59;20!UBERON:0002619;4.82e-54;22!UBERON:0000956;1.86e-47;25!UBERON:0000203;1.86e-47;25!UBERON:0001869;2.59e-44;32!UBERON:0001893;6.75e-41;34!UBERON:0002791;1.21e-38;32!UBERON:0003528;1.84e-34;34!UBERON:0002020;1.84e-34;34!UBERON:0002780;8.48e-27;41!UBERON:0001890;8.48e-27;41!UBERON:0001871;1.07e-20;6!UBERON:0001872;4.84e-19;5!UBERON:0001016;6.40e-17;83!UBERON:0000200;8.74e-16;6!UBERON:0000073;2.35e-15;53!UBERON:0002616;2.35e-15;53!UBERON:0001017;4.61e-13;75!UBERON:0000955;4.63e-13;68!UBERON:0001876;1.84e-12;2!UBERON:0000013;1.47e-11;5!UBERON:0002410;1.47e-11;5!UBERON:0002021;3.69e-11;5!UBERON:0000349;5.60e-11;5!UBERON:0000010;8.03e-11;8!UBERON:0001870;8.35e-09;3!UBERON:0002022;2.16e-07;1!UBERON:0003112;2.16e-07;1!UBERON:0011158;2.16e-07;1!UBERON:0007190;2.16e-07;1!UBERON:0003128;2.16e-07;1!UBERON:0001703;2.16e-07;1!UBERON:0002241;2.16e-07;1!UBERON:0001882;3.51e-07;1!UBERON:0005403;3.51e-07;1!UBERON:0011216;5.96e-07;132!UBERON:0002581;6.01e-07;1!UBERON:0000941;6.01e-07;1!UBERON:0001785;6.01e-07;1!UBERON:0002464;6.01e-07;1!UBERON:0004904;6.01e-07;1!UBERON:0001021;6.01e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.89e-59,20;UBERON:0002619,5.12e-54,22;UBERON:0001869,1.05e-47,32;UBERON:0000956,1.96e-47,25;UBERON:0000203,1.96e-47,25;UBERON:0001893,8.88e-45,34;UBERON:0002791,5.44e-42,32;UBERON:0001016,1.94e-41,89;UBERON:0003528,2.11e-39,34;UBERON:0002020,2.11e-39,34;UBERON:0002780,1.00e-36,41;UBERON:0001890,1.00e-36,41;UBERON:0003080,1.00e-36,41;UBERON:0006240,1.00e-36,41;UBERON:0003056,1.42e-33,61;UBERON:0001017,9.76e-33,81;UBERON:0000955,1.62e-29,68;UBERON:0006238,1.62e-29,68;UBERON:0000073,8.99e-28,53;UBERON:0002616,8.99e-28,53;UBERON:0001049,4.01e-26,56;UBERON:0005068,4.01e-26,56;UBERON:0006241,4.01e-26,56;UBERON:0007135,4.01e-26,56;UBERON:0002346,2.82e-25,86;UBERON:0003075,5.11e-24,82;UBERON:0007284,5.11e-24,82;UBERON:0004121,5.67e-23,171;UBERON:0000924,5.67e-23,171;UBERON:0006601,5.67e-23,171;UBERON:0001871,6.89e-21,6;UBERON:0001872,5.32e-19,5;UBERON:0010371,4.17e-18,104;UBERON:0011216,7.24e-18,223;UBERON:0000200,9.09e-16,6;UBERON:0010314,4.82e-15,132;UBERON:0001876,1.29e-12,2;UBERON:0000013,1.30e-11,5;UBERON:0002410,1.30e-11,5;UBERON:0007023,3.49e-11,114;UBERON:0000349,4.03e-11,5;UBERON:0002021,4.63e-11,5;UBERON:0000010,7.44e-11,8;UBERON:0001870,9.04e-09,3;UBERON:0007190,1.97e-07,1;UBERON:0002022,2.37e-07,1;UBERON:0003112,2.52e-07,1;UBERON:0011158,2.52e-07,1;UBERON:0003128,2.52e-07,1;UBERON:0001703,2.52e-07,1;UBERON:0002241,2.52e-07,1;UBERON:0004761,2.52e-07,1;UBERON:0009617,2.52e-07,1;UBERON:0001882,2.84e-07,1;UBERON:0005403,2.84e-07,1;UBERON:0002581,5.84e-07,1;UBERON:0000941,6.20e-07,1;UBERON:0001785,6.20e-07,1;UBERON:0002464,6.20e-07,1;UBERON:0004904,6.20e-07,1;UBERON:0001021,6.20e-07,1;UBERON:0003902,6.20e-07,1;UBERON:0005425,6.20e-07,1 | |||
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| ||
|short_description=p1@PPEF1 | |||
}} | }} |
Latest revision as of 07:23, 20 September 2015
Short description: | p1@PPEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPEF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000472826, ENST00000496075, ENST00000544635, uc004cys.2, uc011mja.1_5end |
EntrezGene: | PPEF1 |
HGNC: | 9243 |
UniProt: | C9JY08F8WC69B7Z6R7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.36e-07 | 1 |
plasma cell | 1.36e-07 | 1 |
plasmablast | 1.36e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 7.34e-10 | 10 |
neuroendocrine tumor | 9.35e-10 | 6 |