FFCP PHASE1:Hg19::chr2:220306752..220306781,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:220306752..220306781,+
|short_description=p1@SPEG
|description=CAGE_peak_1_at_SPEG_5end
|association_with_transcript=0bp_to_ENST00000396695,ENST00000396698...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10290 | |EntrezGene=10290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16901 | |HGNC=16901 | ||
|TSSclassifier=strong | |||
|UniProt=B9ZVR7,G5E9J7,F8WCA7 | |UniProt=B9ZVR7,G5E9J7,F8WCA7 | ||
|association_with_transcript=0bp_to_ENST00000396695,ENST00000396698,ENST00000420132,ENST00000452101,uc010fwh.1_5end | |||
|cluster_id=chr2:220306752..220306781,+ | |||
|description=CAGE_peak_1_at_SPEG_5end | |||
|id=chr2:220306752..220306781,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.97e-16!180;CL:0000057!2.31e-09!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.20e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.88e-23!169;UBERON:0000924!1.02e-22!173;UBERON:0006601!1.02e-22!173;UBERON:0000073!8.35e-21!94;UBERON:0001016!8.35e-21!94;UBERON:0000475!9.95e-21!365;UBERON:0005743!2.29e-20!86;UBERON:0001017!1.52e-18!82;UBERON:0003075!6.20e-18!86;UBERON:0007284!6.20e-18!86;UBERON:0000033!2.30e-17!123;UBERON:0002346!2.36e-17!90;UBERON:0000955!3.00e-16!69;UBERON:0006238!3.00e-16!69;UBERON:0001049!5.88e-16!57;UBERON:0005068!5.88e-16!57;UBERON:0006241!5.88e-16!57;UBERON:0007135!5.88e-16!57;UBERON:0000153!2.66e-15!129;UBERON:0007811!2.66e-15!129;UBERON:0000481!5.05e-15!347;UBERON:0002616!1.25e-13!59;UBERON:0000483!5.45e-13!309;UBERON:0000119!1.62e-12!312;UBERON:0003056!2.70e-12!61;UBERON:0000468!3.48e-10!659;UBERON:0003080!3.65e-10!42;UBERON:0002780!4.30e-10!41;UBERON:0001890!4.30e-10!41;UBERON:0006240!4.30e-10!41;UBERON:0002020!8.26e-10!34;UBERON:0003528!8.26e-10!34;UBERON:0007023!1.05e-09!115;UBERON:0001893!2.12e-09!34;UBERON:0002791!2.51e-09!33;UBERON:0001869!2.87e-09!32;UBERON:0000064!2.93e-09!219;UBERON:0000956!5.91e-09!25;UBERON:0000203!5.91e-09!25;UBERON:0002619!8.00e-08!22;UBERON:0000467!1.17e-07!625;UBERON:0000922!1.52e-07!612;UBERON:0003076!1.77e-07!15;UBERON:0003057!1.77e-07!15;UBERON:0000480!1.96e-07!626;UBERON:0002050!2.09e-07!605;UBERON:0005423!2.09e-07!605;UBERON:0002097!2.24e-07!40;UBERON:0000923!3.64e-07!604;UBERON:0005291!3.64e-07!604;UBERON:0006598!3.64e-07!604;UBERON:0002532!3.64e-07!604;UBERON:0000062!4.38e-07!511;UBERON:0001950!4.43e-07!20;UBERON:0000025!9.84e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;5.53e-09;25!UBERON:0000203;5.53e-09;25!UBERON:0000073;7.12e-09;53!UBERON:0002616;7.12e-09;53!UBERON:0003528;8.82e-09;34!UBERON:0002020;8.82e-09;34!UBERON:0001869;1.23e-08;32!UBERON:0002791;1.85e-08;32!UBERON:0001893;2.63e-08;34!UBERON:0002619;7.87e-08;22!UBERON:0001016;8.74e-08;83!UBERON:0000955;8.95e-08;68!UBERON:0002780;1.04e-07;41!UBERON:0001890;1.04e-07;41!UBERON:0001017;1.20e-07;75!UBERON:0001950;4.44e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.99e-23,171;UBERON:0000924,3.99e-23,171;UBERON:0006601,3.99e-23,171;UBERON:0010371,8.75e-20,104;UBERON:0001016,4.06e-19,89;UBERON:0001017,1.15e-18,81;UBERON:0003075,2.85e-18,82;UBERON:0007284,2.85e-18,82;UBERON:0002346,1.21e-17,86;UBERON:0010314,2.33e-17,132;UBERON:0000955,2.40e-16,68;UBERON:0006238,2.40e-16,68;UBERON:0001049,4.54e-16,56;UBERON:0005068,4.54e-16,56;UBERON:0006241,4.54e-16,56;UBERON:0007135,4.54e-16,56;UBERON:0000073,8.67e-15,53;UBERON:0002616,8.67e-15,53;UBERON:0000483,1.16e-12,306;UBERON:0011216,1.41e-12,223;UBERON:0000119,4.14e-12,309;UBERON:0003056,5.09e-12,61;UBERON:0002780,3.39e-10,41;UBERON:0001890,3.39e-10,41;UBERON:0003080,3.39e-10,41;UBERON:0006240,3.39e-10,41;UBERON:0003528,6.57e-10,34;UBERON:0002020,6.57e-10,34;UBERON:0001893,1.71e-09,34;UBERON:0001869,2.31e-09,32;UBERON:0002791,2.80e-09,32;UBERON:0007023,3.53e-09,114;UBERON:0000956,4.81e-09,25;UBERON:0000203,4.81e-09,25;UBERON:0002619,6.72e-08,22;UBERON:0003076,1.50e-07,15;UBERON:0003057,1.50e-07,15;UBERON:0002050,1.81e-07,564;UBERON:0001950,3.79e-07,20;UBERON:0002097,4.08e-07,41;UBERON:0000923,4.90e-07,560;UBERON:0010316,4.90e-07,560;UBERON:0005291,4.90e-07,560;UBERON:0006598,4.90e-07,560;UBERON:0010317,4.90e-07,560;UBERON:0002532,4.90e-07,560;UBERON:0005423,9.68e-07,581 | |||
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| ||
|short_description=p1@SPEG | |||
}} | }} |
Latest revision as of 21:16, 24 September 2015
Short description: | p1@SPEG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPEG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396695, ENST00000396698, ENST00000420132, ENST00000452101, uc010fwh.1_5end |
EntrezGene: | SPEG |
HGNC: | 16901 |
UniProt: | B9ZVR7G5E9J7F8WCA7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.20e-09 | 76 |