FFCP PHASE1:Hg19::chr3:135915086..135915144,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:135915086..135915144,- to FFCP PHASE1:Hg19::chr3:135915086..135915144,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55167 | |EntrezGene=55167 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25544 | |HGNC=25544 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZG7 | |UniProt=C9IZG7 | ||
|association_with_transcript=24bp_to_ENST00000473093_5end | |||
|cluster_id=chr3:135915086..135915144,- | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_2_at_MSL2_5end | |||
|id=chr3:135915086..135915144,- | |||
|ontology_enrichment_celltype=CL:0000037!1.11e-48!172;CL:0000566!1.11e-48!172;CL:0002032!5.30e-45!165;CL:0000837!5.30e-45!165;CL:0000988!9.27e-45!182;CL:0000738!8.39e-36!140;CL:0002031!2.89e-30!124;CL:0002087!1.67e-29!119;CL:0000763!7.49e-29!112;CL:0000049!7.49e-29!112;CL:0000766!3.14e-19!76;CL:0002057!1.56e-18!42;CL:0000860!9.41e-17!45;CL:0000557!6.38e-16!71;CL:0000839!2.53e-15!70;CL:0002009!1.29e-14!65;CL:0000542!3.36e-14!53;CL:0000051!3.36e-14!53;CL:0000838!3.36e-14!52;CL:0002194!4.89e-14!63;CL:0000576!4.89e-14!63;CL:0000040!4.89e-14!63;CL:0000559!4.89e-14!63;CL:0000084!6.75e-11!25;CL:0000827!6.75e-11!25;CL:0000791!3.72e-09!18;CL:0000789!3.72e-09!18;CL:0002420!3.72e-09!18;CL:0002419!3.72e-09!18;CL:0000790!3.72e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.73e-16;33!CL:0002057;7.73e-16;33!CL:0000576;2.07e-12;48!CL:0000473;2.38e-11;39!CL:0000234;2.38e-11;39!CL:0000084;5.01e-11;25!CL:0000763;7.97e-11;100!CL:0002087;3.38e-10;104!CL:0000766;1.00e-09;69!CL:0000791;3.69e-09;18!CL:0000789;3.69e-09;18!CL:0002419;3.69e-09;18!CL:0000738;2.61e-08;136!CL:0000542;2.62e-08;53!CL:0000988;3.34e-08;177!CL:0000094;8.43e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.78e-51,168;CL:0000988,8.95e-48,177;CL:0002032,2.64e-47,161;CL:0000837,2.64e-47,161;CL:0000738,5.39e-38,136;CL:0002031,2.31e-32,120;CL:0002087,1.37e-31,115;CL:0000763,4.77e-31,108;CL:0000049,4.77e-31,108;CL:0000766,2.30e-21,72;CL:0000860,1.37e-18,42;CL:0002057,1.37e-18,42;CL:0000557,7.31e-18,67;CL:0000839,3.15e-17,66;CL:0002009,1.60e-16,61;CL:0000473,3.16e-16,48;CL:0000234,3.16e-16,48;CL:0002194,6.28e-16,59;CL:0000576,6.28e-16,59;CL:0000040,6.28e-16,59;CL:0000559,6.28e-16,59;CL:0000542,3.05e-14,53;CL:0000051,3.05e-14,53;CL:0000838,3.06e-14,52;CL:0000084,6.29e-11,25;CL:0000827,6.29e-11,25;CL:0000791,3.51e-09,18;CL:0000789,3.51e-09,18;CL:0002420,3.51e-09,18;CL:0002419,3.51e-09,18;CL:0000790,3.51e-09,18;CL:0000134,3.95e-07,354;CL:0000219,8.55e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;6.18e-14;42!CL:0000049;3.52e-09;108!CL:0000790;3.69e-09;18!CL:0000051;2.62e-08;53 | |||
|ontology_enrichment_disease=DOID:1240!6.89e-14!39;DOID:2531!2.26e-13!51;DOID:0060083!2.26e-13!51;DOID:8692!7.35e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.44e-11;31!DOID:1240;4.90e-11;39!DOID:2531;3.13e-08;51!DOID:0060083;3.13e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,6.28e-14,39;DOID:2531,2.72e-13,51;DOID:0060083,2.72e-13,51;DOID:8692,6.80e-12,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.04e-20!102;UBERON:0003061!4.04e-20!102;UBERON:0002193!8.24e-16!112;UBERON:0002371!1.40e-12!80;UBERON:0001474!1.77e-12!86;UBERON:0007023!3.65e-11!115;UBERON:0001049!2.57e-08!57;UBERON:0005068!2.57e-08!57;UBERON:0006241!2.57e-08!57;UBERON:0007135!2.57e-08!57;UBERON:0004765!2.75e-08!101;UBERON:0001434!2.75e-08!101;UBERON:0002405!3.90e-08!115;UBERON:0002780!9.10e-08!41;UBERON:0001890!9.10e-08!41;UBERON:0006240!9.10e-08!41;UBERON:0003080!1.57e-07!42;UBERON:0001017!5.39e-07!82;UBERON:0000178!6.86e-07!15;UBERON:0000179!6.86e-07!15;UBERON:0000463!6.86e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.18e-07;15!UBERON:0000179;4.18e-07;15!UBERON:0000463;4.18e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.49e-22,98;UBERON:0003061,5.49e-22,98;UBERON:0002193,2.86e-17,108;UBERON:0002371,3.85e-14,76;UBERON:0001474,6.03e-14,82;UBERON:0002405,2.56e-12,93;UBERON:0007023,4.04e-11,114;UBERON:0004765,6.44e-10,90;UBERON:0001049,1.72e-08,56;UBERON:0005068,1.72e-08,56;UBERON:0006241,1.72e-08,56;UBERON:0007135,1.72e-08,56;UBERON:0000073,1.94e-08,53;UBERON:0002616,1.94e-08,53;UBERON:0001434,2.52e-08,100;UBERON:0002780,9.92e-08,41;UBERON:0001890,9.92e-08,41;UBERON:0003080,9.92e-08,41;UBERON:0006240,9.92e-08,41;UBERON:0001017,3.97e-07,81;UBERON:0000178,6.59e-07,15;UBERON:0000179,6.59e-07,15;UBERON:0000463,6.59e-07,15;UBERON:0001016,9.66e-07,89 | |||
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| ||
|short_description=p2@MSL2 | |||
}} | }} |
Latest revision as of 23:39, 24 September 2015
Short description: | p2@MSL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MSL2_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 24bp_to_ENST00000473093_5end |
EntrezGene: | MSL2 |
HGNC: | 25544 |
UniProt: | C9IZG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.49e-22 | 98 |
blood island | 5.49e-22 | 98 |
hemolymphoid system | 2.86e-17 | 108 |
bone marrow | 3.85e-14 | 76 |
bone element | 6.03e-14 | 82 |
immune system | 2.56e-12 | 93 |
adult organism | 4.04e-11 | 114 |
skeletal element | 6.44e-10 | 90 |
neural tube | 1.72e-08 | 56 |
neural rod | 1.72e-08 | 56 |
future spinal cord | 1.72e-08 | 56 |
neural keel | 1.72e-08 | 56 |
regional part of nervous system | 1.94e-08 | 53 |
regional part of brain | 1.94e-08 | 53 |
skeletal system | 2.52e-08 | 100 |
regional part of forebrain | 9.92e-08 | 41 |
forebrain | 9.92e-08 | 41 |
anterior neural tube | 9.92e-08 | 41 |
future forebrain | 9.92e-08 | 41 |
central nervous system | 3.97e-07 | 81 |
blood | 6.59e-07 | 15 |
haemolymphatic fluid | 6.59e-07 | 15 |
organism substance | 6.59e-07 | 15 |
nervous system | 9.66e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
leukemia | 6.28e-14 | 39 |
hematologic cancer | 2.72e-13 | 51 |
immune system cancer | 2.72e-13 | 51 |
myeloid leukemia | 6.80e-12 | 31 |