FFCP PHASE1:Hg19::chr5:141337739..141337772,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51294 | |EntrezGene=51294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8657 | |HGNC=8657 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPG4 | |UniProt=Q9NPG4 | ||
|association_with_transcript=0bp_to_AK024140,AY358428_5end | |association_with_transcript=0bp_to_AK024140,AY358428_5end | ||
|cluster_id=chr5:141337739..141337772,- | |||
|coexpression_cluster_id=C4469 | |||
|description=CAGE_peak_1_at_PCDH12_5end | |description=CAGE_peak_1_at_PCDH12_5end | ||
|id=chr5:141337739..141337772,- | |id=chr5:141337739..141337772,- | ||
|ontology_enrichment_celltype=CL:0002139!4.87e-22!24;CL:0000115!2.05e-20!35;CL:0000071!3.84e-17!18;CL:0002546!3.84e-17!18;CL:0002078!2.59e-14!44;CL:1000413!1.34e-09!9;CL:0000213!3.25e-08!57;CL:0000215!3.25e-08!57;CL:0002544!6.55e-07!6 | |ontology_enrichment_celltype=CL:0002139!4.87e-22!24;CL:0000115!2.05e-20!35;CL:0000071!3.84e-17!18;CL:0002546!3.84e-17!18;CL:0002078!2.59e-14!44;CL:1000413!1.34e-09!9;CL:0000213!3.25e-08!57;CL:0000215!3.25e-08!57;CL:0002544!6.55e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.21e-31;24!CL:0000115;8.81e-26;36!CL:0000071;1.93e-24;18!CL:0002078;2.67e-14;45!CL:1000413;2.33e-13;9!CL:0000213;9.30e-10;58!CL:0000215;9.30e-10;58!CL:0002544;2.05e-09;6!CL:0002543;9.25e-09;6!CL:0002138;9.69e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.15e-31,24;CL:0000115,2.36e-30,36;CL:0000071,1.89e-24,18;CL:0002546,1.89e-24,18;CL:0002078,5.99e-22,45;CL:0000213,1.38e-14,58;CL:0000215,1.38e-14,58;CL:1000413,2.32e-13,9;CL:0002544,2.01e-09,6;CL:0002543,9.12e-09,6;CL:0005020,9.49e-09,6;CL:0002138,9.49e-09,6;CL:0005022,9.49e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.93e-24;18!CL:0005022;9.69e-09;6!UBERON:0004872;2.89e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;1.93e-24;18!UBERON:0001986;1.93e-24;18!UBERON:0004852;1.93e-24;18!UBERON:0000487;9.75e-19;22!UBERON:0006914;1.10e-15;25!UBERON:0003915;2.33e-13;9!UBERON:0004700;2.33e-13;9!UBERON:0001917;2.33e-13;9!UBERON:0007023;4.17e-10;114!UBERON:0000490;1.12e-09;33!UBERON:0002780;2.75e-09;41!UBERON:0001890;2.75e-09;41!UBERON:0002619;6.59e-09;22!UBERON:0001950;7.96e-09;20!UBERON:0007100;4.57e-08;25!UBERON:0000073;1.11e-07;53!UBERON:0002616;1.11e-07;53!UBERON:0001893;1.39e-07;34!UBERON:0002465;1.97e-07;10!UBERON:0000956;2.11e-07;25!UBERON:0000203;2.11e-07;25!UBERON:0001869;2.46e-07;32!UBERON:0002791;2.49e-07;32!UBERON:0001638;4.04e-07;9!UBERON:0003920;4.04e-07;9!UBERON:0004582;4.04e-07;9!UBERON:0000922;7.21e-07;49!UBERON:0003528;7.35e-07;34!UBERON:0002020;7.35e-07;34 | |||
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| ||
|short_description=p1@PCDH12 | |short_description=p1@PCDH12 | ||
}} | }} |
Latest revision as of 05:33, 25 September 2015
Short description: | p1@PCDH12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDH12_5end |
Coexpression cluster: | C4469_Endothelial_lung_spleen_placenta_Hepatic_adipose_skeletal |
Association with transcript: | 0bp_to_AK024140, AY358428_5end |
EntrezGene: | PCDH12 |
HGNC: | 8657 |
UniProt: | Q9NPG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.15e-31 | 24 |
endothelial cell | 2.36e-30 | 36 |
blood vessel endothelial cell | 1.89e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.89e-24 | 18 |
meso-epithelial cell | 5.99e-22 | 45 |
lining cell | 1.38e-14 | 58 |
barrier cell | 1.38e-14 | 58 |
endothelial cell of artery | 2.32e-13 | 9 |
aortic endothelial cell | 2.01e-09 | 6 |
vein endothelial cell | 9.12e-09 | 6 |
lymphangioblast | 9.49e-09 | 6 |
endothelial cell of lymphatic vessel | 9.49e-09 | 6 |
vascular lymphangioblast | 9.49e-09 | 6 |