FFCP PHASE1:Hg19::chr5:141337739..141337772,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:141337739..141337772,- to FFCP PHASE1:Hg19::chr5:141337739..141337772,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51294 | |EntrezGene=51294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8657 | |HGNC=8657 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPG4 | |UniProt=Q9NPG4 | ||
|association_with_transcript=0bp_to_AK024140,AY358428_5end | |||
|cluster_id=chr5:141337739..141337772,- | |||
|coexpression_cluster_id=C4469 | |||
|description=CAGE_peak_1_at_PCDH12_5end | |||
|id=chr5:141337739..141337772,- | |||
|ontology_enrichment_celltype=CL:0002139!4.87e-22!24;CL:0000115!2.05e-20!35;CL:0000071!3.84e-17!18;CL:0002546!3.84e-17!18;CL:0002078!2.59e-14!44;CL:1000413!1.34e-09!9;CL:0000213!3.25e-08!57;CL:0000215!3.25e-08!57;CL:0002544!6.55e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.21e-31;24!CL:0000115;8.81e-26;36!CL:0000071;1.93e-24;18!CL:0002078;2.67e-14;45!CL:1000413;2.33e-13;9!CL:0000213;9.30e-10;58!CL:0000215;9.30e-10;58!CL:0002544;2.05e-09;6!CL:0002543;9.25e-09;6!CL:0002138;9.69e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.15e-31,24;CL:0000115,2.36e-30,36;CL:0000071,1.89e-24,18;CL:0002546,1.89e-24,18;CL:0002078,5.99e-22,45;CL:0000213,1.38e-14,58;CL:0000215,1.38e-14,58;CL:1000413,2.32e-13,9;CL:0002544,2.01e-09,6;CL:0002543,9.12e-09,6;CL:0005020,9.49e-09,6;CL:0002138,9.49e-09,6;CL:0005022,9.49e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.93e-24;18!CL:0005022;9.69e-09;6!UBERON:0004872;2.89e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.10e-38!115;UBERON:0001986!3.84e-17!18;UBERON:0004638!3.84e-17!18;UBERON:0004852!3.84e-17!18;UBERON:0004111!1.09e-16!241;UBERON:0000025!5.12e-16!194;UBERON:0000477!1.05e-13!286;UBERON:0001049!1.10e-13!57;UBERON:0005068!1.10e-13!57;UBERON:0006241!1.10e-13!57;UBERON:0007135!1.10e-13!57;UBERON:0000487!1.72e-13!22;UBERON:0003080!3.20e-13!42;UBERON:0002780!1.48e-12!41;UBERON:0001890!1.48e-12!41;UBERON:0006240!1.48e-12!41;UBERON:0006914!6.46e-12!25;UBERON:0002616!1.42e-11!59;UBERON:0000955!3.95e-11!69;UBERON:0006238!3.95e-11!69;UBERON:0001893!9.58e-11!34;UBERON:0001017!1.36e-10!82;UBERON:0002020!1.45e-10!34;UBERON:0003528!1.45e-10!34;UBERON:0002791!2.67e-10!33;UBERON:0005743!3.92e-10!86;UBERON:0001869!5.35e-10!32;UBERON:0003915!1.34e-09!9;UBERON:0004700!1.34e-09!9;UBERON:0001917!1.34e-09!9;UBERON:0000468!1.40e-09!659;UBERON:0000467!1.75e-09!625;UBERON:0000480!2.31e-09!626;UBERON:0000073!3.23e-09!94;UBERON:0001016!3.23e-09!94;UBERON:0002346!3.51e-09!90;UBERON:0000055!3.87e-09!69;UBERON:0003075!4.92e-09!86;UBERON:0007284!4.92e-09!86;UBERON:0004872!8.26e-09!84;UBERON:0002619!2.22e-08!22;UBERON:0000922!5.96e-08!612;UBERON:0001009!7.54e-08!113;UBERON:0001950!1.34e-07!20;UBERON:0000956!2.26e-07!25;UBERON:0000203!2.26e-07!25;UBERON:0002050!2.39e-07!605;UBERON:0005423!2.39e-07!605;UBERON:0003056!2.63e-07!61;UBERON:0000483!3.09e-07!309;UBERON:0000923!4.67e-07!604;UBERON:0005291!4.67e-07!604;UBERON:0006598!4.67e-07!604;UBERON:0002532!4.67e-07!604;UBERON:0000119!7.00e-07!312;UBERON:0004535!8.83e-07!110;UBERON:0002049!9.50e-07!79;UBERON:0007798!9.50e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.93e-24;18!UBERON:0001986;1.93e-24;18!UBERON:0004852;1.93e-24;18!UBERON:0000487;9.75e-19;22!UBERON:0006914;1.10e-15;25!UBERON:0003915;2.33e-13;9!UBERON:0004700;2.33e-13;9!UBERON:0001917;2.33e-13;9!UBERON:0007023;4.17e-10;114!UBERON:0000490;1.12e-09;33!UBERON:0002780;2.75e-09;41!UBERON:0001890;2.75e-09;41!UBERON:0002619;6.59e-09;22!UBERON:0001950;7.96e-09;20!UBERON:0007100;4.57e-08;25!UBERON:0000073;1.11e-07;53!UBERON:0002616;1.11e-07;53!UBERON:0001893;1.39e-07;34!UBERON:0002465;1.97e-07;10!UBERON:0000956;2.11e-07;25!UBERON:0000203;2.11e-07;25!UBERON:0001869;2.46e-07;32!UBERON:0002791;2.49e-07;32!UBERON:0001638;4.04e-07;9!UBERON:0003920;4.04e-07;9!UBERON:0004582;4.04e-07;9!UBERON:0000922;7.21e-07;49!UBERON:0003528;7.35e-07;34!UBERON:0002020;7.35e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.87e-41,114;UBERON:0004638,1.89e-24,18;UBERON:0001986,1.89e-24,18;UBERON:0004852,1.89e-24,18;UBERON:0004111,2.59e-21,240;UBERON:0000025,9.51e-19,192;UBERON:0000487,9.57e-19,22;UBERON:0006914,1.08e-15,25;UBERON:0003915,2.32e-13,9;UBERON:0004700,2.32e-13,9;UBERON:0001917,2.32e-13,9;UBERON:0004872,1.19e-12,83;UBERON:0000055,8.70e-12,68;UBERON:0000073,3.38e-11,53;UBERON:0002616,3.38e-11,53;UBERON:0002780,3.88e-11,41;UBERON:0001890,3.88e-11,41;UBERON:0003080,3.88e-11,41;UBERON:0006240,3.88e-11,41;UBERON:0001049,3.94e-11,56;UBERON:0005068,3.94e-11,56;UBERON:0006241,3.94e-11,56;UBERON:0007135,3.94e-11,56;UBERON:0001009,4.13e-11,112;UBERON:0010314,3.83e-10,132;UBERON:0004535,1.61e-09,109;UBERON:0000483,1.76e-09,306;UBERON:0001893,2.66e-09,34;UBERON:0003914,3.20e-09,117;UBERON:0000119,3.57e-09,309;UBERON:0002049,4.99e-09,78;UBERON:0007798,4.99e-09,78;UBERON:0002619,7.03e-09,22;UBERON:0001950,8.06e-09,20;UBERON:0007500,1.57e-08,59;UBERON:0001981,1.57e-08,59;UBERON:0004537,1.57e-08,59;UBERON:0006965,1.57e-08,59;UBERON:0003528,2.23e-08,34;UBERON:0002020,2.23e-08,34;UBERON:0003075,2.26e-08,82;UBERON:0007284,2.26e-08,82;UBERON:0001869,2.46e-08,32;UBERON:0002791,3.12e-08,32;UBERON:0000955,3.25e-08,68;UBERON:0006238,3.25e-08,68;UBERON:0002465,1.44e-07,10;UBERON:0002346,1.44e-07,86;UBERON:0001017,1.61e-07,81;UBERON:0000956,2.23e-07,25;UBERON:0000203,2.23e-07,25;UBERON:0007100,3.42e-07,27;UBERON:0001638,3.93e-07,9;UBERON:0003920,3.93e-07,9;UBERON:0004582,3.93e-07,9;UBERON:0003103,4.38e-07,68;UBERON:0002050,5.10e-07,564;UBERON:0001016,5.50e-07,89;UBERON:0000923,6.78e-07,560;UBERON:0010316,6.78e-07,560;UBERON:0005291,6.78e-07,560;UBERON:0006598,6.78e-07,560;UBERON:0010317,6.78e-07,560;UBERON:0002532,6.78e-07,560;UBERON:0000922,8.98e-07,592 | |||
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| ||
|short_description=p1@PCDH12 | |||
}} | }} |
Latest revision as of 05:33, 25 September 2015
Short description: | p1@PCDH12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PCDH12_5end |
Coexpression cluster: | C4469_Endothelial_lung_spleen_placenta_Hepatic_adipose_skeletal |
Association with transcript: | 0bp_to_AK024140, AY358428_5end |
EntrezGene: | PCDH12 |
HGNC: | 8657 |
UniProt: | Q9NPG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.15e-31 | 24 |
endothelial cell | 2.36e-30 | 36 |
blood vessel endothelial cell | 1.89e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.89e-24 | 18 |
meso-epithelial cell | 5.99e-22 | 45 |
lining cell | 1.38e-14 | 58 |
barrier cell | 1.38e-14 | 58 |
endothelial cell of artery | 2.32e-13 | 9 |
aortic endothelial cell | 2.01e-09 | 6 |
vein endothelial cell | 9.12e-09 | 6 |
lymphangioblast | 9.49e-09 | 6 |
endothelial cell of lymphatic vessel | 9.49e-09 | 6 |
vascular lymphangioblast | 9.49e-09 | 6 |