FFCP PHASE1:Hg19::chr20:327338..327376,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80023 | |EntrezGene=80023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16229 | |HGNC=16229 | ||
|TSSclassifier=strong | |||
|UniProt=Q9GZP1 | |UniProt=Q9GZP1 | ||
|association_with_transcript=0bp_to_NM_024958,uc002wdi.3_5end | |association_with_transcript=0bp_to_NM_024958,uc002wdi.3_5end | ||
|cluster_id=chr20:327338..327376,+ | |||
|description=CAGE_peak_3_at_NRSN2_5end | |description=CAGE_peak_3_at_NRSN2_5end | ||
|id=chr20:327338..327376,+ | |id=chr20:327338..327376,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.12e-29!180;CL:0000222!2.66e-14!119;CL:0000057!4.69e-14!75;CL:0000183!3.10e-12!59;CL:0000220!1.06e-10!246;CL:0002321!1.92e-10!248;CL:0000187!2.51e-10!54;CL:0000680!3.10e-10!57;CL:0000056!3.10e-10!57;CL:0000355!3.10e-10!57;CL:0000393!4.42e-09!60;CL:0000211!4.42e-09!60;CL:0000192!6.61e-09!42;CL:0000514!6.61e-09!42 | |ontology_enrichment_celltype=CL:0000055!4.12e-29!180;CL:0000222!2.66e-14!119;CL:0000057!4.69e-14!75;CL:0000183!3.10e-12!59;CL:0000220!1.06e-10!246;CL:0002321!1.92e-10!248;CL:0000187!2.51e-10!54;CL:0000680!3.10e-10!57;CL:0000056!3.10e-10!57;CL:0000355!3.10e-10!57;CL:0000393!4.42e-09!60;CL:0000211!4.42e-09!60;CL:0000192!6.61e-09!42;CL:0000514!6.61e-09!42 | ||
|ontology_enrichment_celltype_v019=CL:0000192;2.90e-07;43 | |ontology_enrichment_celltype_v019=CL:0000192;2.90e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.48e-14,121;CL:0000057,2.11e-12,76;CL:0000187,9.89e-11,55;CL:0000680,1.94e-10,58;CL:0000056,1.94e-10,58;CL:0000355,1.94e-10,58;CL:0000393,1.23e-09,61;CL:0000211,1.23e-09,61;CL:0000192,3.54e-09,43;CL:0000514,3.54e-09,43;CL:0002321,2.45e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;2.90e-07;43 | |ontology_enrichment_development_v019=CL:0000514;2.90e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.77e-28!365;UBERON:0000119!3.30e-25!312;UBERON:0000483!1.78e-24!309;UBERON:0000477!1.87e-23!286;UBERON:0000481!2.64e-21!347;UBERON:0004111!3.36e-21!241;UBERON:0000025!4.80e-21!194;UBERON:0003075!2.90e-17!86;UBERON:0007284!2.90e-17!86;UBERON:0000033!3.52e-17!123;UBERON:0002346!2.81e-16!90;UBERON:0000073!5.41e-16!94;UBERON:0001016!5.41e-16!94;UBERON:0005743!7.63e-16!86;UBERON:0000153!6.05e-15!129;UBERON:0007811!6.05e-15!129;UBERON:0000467!8.80e-15!625;UBERON:0000468!1.58e-14!659;UBERON:0000480!1.63e-14!626;UBERON:0001017!2.20e-14!82;UBERON:0000955!2.49e-14!69;UBERON:0006238!2.49e-14!69;UBERON:0002616!3.34e-14!59;UBERON:0004121!4.97e-14!169;UBERON:0003056!8.66e-14!61;UBERON:0001049!1.14e-13!57;UBERON:0005068!1.14e-13!57;UBERON:0006241!1.14e-13!57;UBERON:0007135!1.14e-13!57;UBERON:0000924!1.48e-13!173;UBERON:0006601!1.48e-13!173;UBERON:0000064!1.94e-12!219;UBERON:0005256!4.01e-12!143;UBERON:0000914!3.85e-11!83;UBERON:0002329!3.85e-11!83;UBERON:0003077!3.85e-11!83;UBERON:0003059!3.85e-11!83;UBERON:0007282!3.85e-11!83;UBERON:0009618!3.85e-11!83;UBERON:0007285!3.85e-11!83;UBERON:0002100!5.14e-11!216;UBERON:0003914!7.07e-11!118;UBERON:0002049!3.04e-10!79;UBERON:0007798!3.04e-10!79;UBERON:0003080!3.06e-10!42;UBERON:0002780!4.25e-10!41;UBERON:0001890!4.25e-10!41;UBERON:0006240!4.25e-10!41;UBERON:0004872!5.15e-10!84;UBERON:0002050!1.16e-09!605;UBERON:0005423!1.16e-09!605;UBERON:0000923!1.29e-09!604;UBERON:0005291!1.29e-09!604;UBERON:0006598!1.29e-09!604;UBERON:0002532!1.29e-09!604;UBERON:0000922!1.34e-09!612;UBERON:0004290!4.81e-09!70;UBERON:0001893!7.50e-09!34;UBERON:0002020!7.99e-09!34;UBERON:0003528!7.99e-09!34;UBERON:0001869!8.45e-09!32;UBERON:0001134!2.16e-08!61;UBERON:0002036!2.16e-08!61;UBERON:0003082!2.16e-08!61;UBERON:0002791!2.27e-08!33;UBERON:0002385!3.05e-08!63;UBERON:0001015!3.05e-08!63;UBERON:0000383!3.05e-08!63;UBERON:0000055!5.92e-08!69;UBERON:0001009!8.62e-08!113;UBERON:0000486!9.23e-08!82;UBERON:0000490!1.12e-07!138;UBERON:0004535!1.22e-07!110;UBERON:0000956!3.10e-07!25;UBERON:0000203!3.10e-07!25;UBERON:0001981!7.49e-07!60;UBERON:0007500!7.49e-07!60;UBERON:0004537!7.49e-07!60;UBERON:0006965!7.49e-07!60;UBERON:0000062!7.52e-07!511 | |ontology_enrichment_uberon=UBERON:0000475!3.77e-28!365;UBERON:0000119!3.30e-25!312;UBERON:0000483!1.78e-24!309;UBERON:0000477!1.87e-23!286;UBERON:0000481!2.64e-21!347;UBERON:0004111!3.36e-21!241;UBERON:0000025!4.80e-21!194;UBERON:0003075!2.90e-17!86;UBERON:0007284!2.90e-17!86;UBERON:0000033!3.52e-17!123;UBERON:0002346!2.81e-16!90;UBERON:0000073!5.41e-16!94;UBERON:0001016!5.41e-16!94;UBERON:0005743!7.63e-16!86;UBERON:0000153!6.05e-15!129;UBERON:0007811!6.05e-15!129;UBERON:0000467!8.80e-15!625;UBERON:0000468!1.58e-14!659;UBERON:0000480!1.63e-14!626;UBERON:0001017!2.20e-14!82;UBERON:0000955!2.49e-14!69;UBERON:0006238!2.49e-14!69;UBERON:0002616!3.34e-14!59;UBERON:0004121!4.97e-14!169;UBERON:0003056!8.66e-14!61;UBERON:0001049!1.14e-13!57;UBERON:0005068!1.14e-13!57;UBERON:0006241!1.14e-13!57;UBERON:0007135!1.14e-13!57;UBERON:0000924!1.48e-13!173;UBERON:0006601!1.48e-13!173;UBERON:0000064!1.94e-12!219;UBERON:0005256!4.01e-12!143;UBERON:0000914!3.85e-11!83;UBERON:0002329!3.85e-11!83;UBERON:0003077!3.85e-11!83;UBERON:0003059!3.85e-11!83;UBERON:0007282!3.85e-11!83;UBERON:0009618!3.85e-11!83;UBERON:0007285!3.85e-11!83;UBERON:0002100!5.14e-11!216;UBERON:0003914!7.07e-11!118;UBERON:0002049!3.04e-10!79;UBERON:0007798!3.04e-10!79;UBERON:0003080!3.06e-10!42;UBERON:0002780!4.25e-10!41;UBERON:0001890!4.25e-10!41;UBERON:0006240!4.25e-10!41;UBERON:0004872!5.15e-10!84;UBERON:0002050!1.16e-09!605;UBERON:0005423!1.16e-09!605;UBERON:0000923!1.29e-09!604;UBERON:0005291!1.29e-09!604;UBERON:0006598!1.29e-09!604;UBERON:0002532!1.29e-09!604;UBERON:0000922!1.34e-09!612;UBERON:0004290!4.81e-09!70;UBERON:0001893!7.50e-09!34;UBERON:0002020!7.99e-09!34;UBERON:0003528!7.99e-09!34;UBERON:0001869!8.45e-09!32;UBERON:0001134!2.16e-08!61;UBERON:0002036!2.16e-08!61;UBERON:0003082!2.16e-08!61;UBERON:0002791!2.27e-08!33;UBERON:0002385!3.05e-08!63;UBERON:0001015!3.05e-08!63;UBERON:0000383!3.05e-08!63;UBERON:0000055!5.92e-08!69;UBERON:0001009!8.62e-08!113;UBERON:0000486!9.23e-08!82;UBERON:0000490!1.12e-07!138;UBERON:0004535!1.22e-07!110;UBERON:0000956!3.10e-07!25;UBERON:0000203!3.10e-07!25;UBERON:0001981!7.49e-07!60;UBERON:0007500!7.49e-07!60;UBERON:0004537!7.49e-07!60;UBERON:0006965!7.49e-07!60;UBERON:0000062!7.52e-07!511 | ||
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| ||
|short_description=p3@NRSN2 | |short_description=p3@NRSN2 | ||
}} | }} |
Latest revision as of 06:25, 25 September 2015
Short description: | p3@NRSN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NRSN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_024958, uc002wdi.3_5end |
EntrezGene: | NRSN2 |
HGNC: | 16229 |
UniProt: | Q9GZP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.48e-14 | 121 |
fibroblast | 2.11e-12 | 76 |
muscle cell | 9.89e-11 | 55 |
muscle precursor cell | 1.94e-10 | 58 |
myoblast | 1.94e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.94e-10 | 58 |
electrically responsive cell | 1.23e-09 | 61 |
electrically active cell | 1.23e-09 | 61 |
smooth muscle cell | 3.54e-09 | 43 |
smooth muscle myoblast | 3.54e-09 | 43 |
embryonic cell | 2.45e-07 | 250 |