FFCP PHASE1:Mm9::chr3:67267538..67267549,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17035 | |EntrezGene=17035 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2380 | |MCL_coexpression_id=2380 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=154bp_to_ENSMUST00000160202_5end | |association_with_transcript=154bp_to_ENSMUST00000160202_5end | ||
|cluster_id=chr3:67267538..67267549,- | |||
|description=CAGE_peak_3_at_Lxn_5end | |description=CAGE_peak_3_at_Lxn_5end | ||
|id=chr3:67267538..67267549,- | |id=chr3:67267538..67267549,- | ||
|ontology_enrichment_celltype=CL:0000055!4.01e-15!50;CL:0002319!2.49e-14!43;CL:0000221!2.54e-14!44;CL:0000133!2.54e-14!44;CL:0000117!1.09e-10!23;CL:0000337!1.09e-10!23;CL:0000393!2.94e-10!39;CL:0000211!2.94e-10!39;CL:0000540!8.63e-09!33;CL:0000047!8.63e-09!33;CL:0000031!8.63e-09!33;CL:0000404!8.63e-09!33;CL:0002321!5.04e-08!70;CL:0000220!5.04e-08!70;CL:0000333!2.90e-07!10;CL:0000095!2.90e-07!10;CL:0000243!2.90e-07!10;CL:0000123!2.90e-07!10;CL:0000125!2.90e-07!10;CL:0000030!2.90e-07!10;CL:0000339!2.90e-07!10 | |ontology_enrichment_celltype=CL:0000055!4.01e-15!50;CL:0002319!2.49e-14!43;CL:0000221!2.54e-14!44;CL:0000133!2.54e-14!44;CL:0000117!1.09e-10!23;CL:0000337!1.09e-10!23;CL:0000393!2.94e-10!39;CL:0000211!2.94e-10!39;CL:0000540!8.63e-09!33;CL:0000047!8.63e-09!33;CL:0000031!8.63e-09!33;CL:0000404!8.63e-09!33;CL:0002321!5.04e-08!70;CL:0000220!5.04e-08!70;CL:0000333!2.90e-07!10;CL:0000095!2.90e-07!10;CL:0000243!2.90e-07!10;CL:0000123!2.90e-07!10;CL:0000125!2.90e-07!10;CL:0000030!2.90e-07!10;CL:0000339!2.90e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.83e-22,43;CL:0000221,8.63e-22,44;CL:0000133,8.63e-22,44;CL:0000117,4.61e-19,23;CL:0000337,4.61e-19,23;CL:0002321,3.58e-15,70;CL:0000393,2.62e-14,39;CL:0000211,2.62e-14,39;CL:0002453,4.80e-14,8;CL:0000333,1.89e-13,10;CL:0000095,1.89e-13,10;CL:0000243,1.89e-13,10;CL:0000123,1.89e-13,10;CL:0000125,1.89e-13,10;CL:0000030,1.89e-13,10;CL:0000339,1.89e-13,10;CL:0000540,6.56e-12,33;CL:0000047,6.56e-12,33;CL:0000031,6.56e-12,33;CL:0000404,6.56e-12,33;CL:0000128,1.61e-11,6;CL:0000126,1.61e-11,6;CL:0000127,1.61e-11,6;CL:0000192,3.41e-07,3;CL:0000359,3.41e-07,3;CL:0002539,3.41e-07,3;CL:0000514,3.41e-07,3;CL:0002612,8.20e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.43e-21!75;UBERON:0001016!4.43e-21!75;UBERON:0001017!4.31e-20!73;UBERON:0005743!4.31e-20!73;UBERON:0001049!1.02e-14!52;UBERON:0005068!1.02e-14!52;UBERON:0006241!1.02e-14!52;UBERON:0007135!1.02e-14!52;UBERON:0004121!4.27e-14!102;UBERON:0000924!4.27e-14!102;UBERON:0006601!4.27e-14!102;UBERON:0000955!3.65e-13!50;UBERON:0006238!3.65e-13!50;UBERON:0002616!1.26e-12!49;UBERON:0002020!2.51e-12!34;UBERON:0002346!4.85e-11!71;UBERON:0003075!4.85e-11!71;UBERON:0007284!4.85e-11!71;UBERON:0000033!1.87e-10!63;UBERON:0002791!4.21e-09!29;UBERON:0003528!4.21e-09!29;UBERON:0001893!4.21e-09!29;UBERON:0003076!5.67e-09!12;UBERON:0003057!5.67e-09!12;UBERON:0000025!6.81e-09!114;UBERON:0003080!5.23e-08!40;UBERON:0004111!6.10e-08!122;UBERON:0002780!1.76e-07!39;UBERON:0001890!1.76e-07!39;UBERON:0006240!1.76e-07!39;UBERON:0003056!6.58e-07!49 | |ontology_enrichment_uberon=UBERON:0000073!4.43e-21!75;UBERON:0001016!4.43e-21!75;UBERON:0001017!4.31e-20!73;UBERON:0005743!4.31e-20!73;UBERON:0001049!1.02e-14!52;UBERON:0005068!1.02e-14!52;UBERON:0006241!1.02e-14!52;UBERON:0007135!1.02e-14!52;UBERON:0004121!4.27e-14!102;UBERON:0000924!4.27e-14!102;UBERON:0006601!4.27e-14!102;UBERON:0000955!3.65e-13!50;UBERON:0006238!3.65e-13!50;UBERON:0002616!1.26e-12!49;UBERON:0002020!2.51e-12!34;UBERON:0002346!4.85e-11!71;UBERON:0003075!4.85e-11!71;UBERON:0007284!4.85e-11!71;UBERON:0000033!1.87e-10!63;UBERON:0002791!4.21e-09!29;UBERON:0003528!4.21e-09!29;UBERON:0001893!4.21e-09!29;UBERON:0003076!5.67e-09!12;UBERON:0003057!5.67e-09!12;UBERON:0000025!6.81e-09!114;UBERON:0003080!5.23e-08!40;UBERON:0004111!6.10e-08!122;UBERON:0002780!1.76e-07!39;UBERON:0001890!1.76e-07!39;UBERON:0006240!1.76e-07!39;UBERON:0003056!6.58e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.01e-34,75;UBERON:0001017,7.78e-34,73;UBERON:0000073,9.26e-28,54;UBERON:0001049,4.06e-25,52;UBERON:0005068,4.06e-25,52;UBERON:0006241,4.06e-25,52;UBERON:0007135,4.06e-25,52;UBERON:0004121,5.90e-25,95;UBERON:0000924,5.90e-25,95;UBERON:0006601,5.90e-25,95;UBERON:0002020,1.36e-19,34;UBERON:0002346,7.28e-19,64;UBERON:0003075,7.28e-19,64;UBERON:0007284,7.28e-19,64;UBERON:0000955,6.03e-18,47;UBERON:0006238,6.03e-18,47;UBERON:0003076,1.00e-17,12;UBERON:0003057,1.00e-17,12;UBERON:0002616,8.21e-17,46;UBERON:0010371,1.54e-15,73;UBERON:0003528,1.48e-12,29;UBERON:0002791,1.48e-12,29;UBERON:0001893,1.48e-12,29;UBERON:0002420,2.75e-12,8;UBERON:0007245,2.75e-12,8;UBERON:0010009,2.75e-12,8;UBERON:0010011,2.75e-12,8;UBERON:0000454,2.75e-12,8;UBERON:0002240,5.38e-12,6;UBERON:0005174,5.38e-12,6;UBERON:0001137,5.38e-12,6;UBERON:0003080,1.13e-11,40;UBERON:0010314,1.45e-11,92;UBERON:0000025,1.70e-11,114;UBERON:0002780,1.43e-10,39;UBERON:0001890,1.43e-10,39;UBERON:0006240,1.43e-10,39;UBERON:0001948,2.28e-10,5;UBERON:0002315,2.28e-10,5;UBERON:0004111,3.71e-10,122;UBERON:0003056,1.21e-08,49;UBERON:0000369,2.36e-08,5;UBERON:0002435,2.36e-08,5;UBERON:0000204,2.36e-08,5;UBERON:0010082,2.36e-08,5;UBERON:0004733,1.55e-07,6;UBERON:0004732,1.55e-07,6;UBERON:0002028,1.55e-07,6;UBERON:0007277,1.55e-07,6;UBERON:0011216,1.59e-07,194;UBERON:0001135,3.41e-07,3;UBERON:0004237,3.41e-07,3;UBERON:0004695,3.41e-07,3;UBERON:0002111,3.41e-07,3;UBERON:0004178,3.41e-07,3;UBERON:0002950,3.55e-07,4;UBERON:0001891,3.55e-07,4;UBERON:0009616,3.55e-07,4;UBERON:0010286,3.55e-07,4;UBERON:0002257,8.20e-07,3 | |||
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| ||
|short_description=p3@Lxn | |short_description=p3@Lxn | ||
}} | }} |
Latest revision as of 16:05, 25 September 2015
Short description: | p3@Lxn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lxn_5end |
Coexpression cluster: | MCL_coexpression_mm9:2380 |
Association with transcript: | 154bp_to_ENSMUST00000160202_5end |
EntrezGene: | Lxn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.83e-22 | 43 |
ectodermal cell | 8.63e-22 | 44 |
neurectodermal cell | 8.63e-22 | 44 |
CNS neuron (sensu Vertebrata) | 4.61e-19 | 23 |
neuroblast (sensu Vertebrata) | 4.61e-19 | 23 |
embryonic cell | 3.58e-15 | 70 |
electrically responsive cell | 2.62e-14 | 39 |
electrically active cell | 2.62e-14 | 39 |
oligodendrocyte precursor cell | 4.80e-14 | 8 |
migratory neural crest cell | 1.89e-13 | 10 |
neuron associated cell | 1.89e-13 | 10 |
glial cell (sensu Vertebrata) | 1.89e-13 | 10 |
neuron associated cell (sensu Vertebrata) | 1.89e-13 | 10 |
glial cell | 1.89e-13 | 10 |
glioblast | 1.89e-13 | 10 |
glioblast (sensu Vertebrata) | 1.89e-13 | 10 |
neuron | 6.56e-12 | 33 |
neuronal stem cell | 6.56e-12 | 33 |
neuroblast | 6.56e-12 | 33 |
electrically signaling cell | 6.56e-12 | 33 |
oligodendrocyte | 1.61e-11 | 6 |
macroglial cell | 1.61e-11 | 6 |
astrocyte | 1.61e-11 | 6 |
smooth muscle cell | 3.41e-07 | 3 |
vascular associated smooth muscle cell | 3.41e-07 | 3 |
aortic smooth muscle cell | 3.41e-07 | 3 |
smooth muscle myoblast | 3.41e-07 | 3 |
neuron of the ventral spinal cord | 8.20e-07 | 3 |