FFCP PHASE1:Mm9::chr3:67267538..67267549,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:67267538..67267549,-
|short_description=p3@Lxn
|description=CAGE_peak_3_at_Lxn_5end
|association_with_transcript=154bp_to_ENSMUST00000160202_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17035 | |EntrezGene=17035 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2380 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=154bp_to_ENSMUST00000160202_5end | |||
|cluster_id=chr3:67267538..67267549,- | |||
|description=CAGE_peak_3_at_Lxn_5end | |||
|id=chr3:67267538..67267549,- | |||
|ontology_enrichment_celltype=CL:0000055!4.01e-15!50;CL:0002319!2.49e-14!43;CL:0000221!2.54e-14!44;CL:0000133!2.54e-14!44;CL:0000117!1.09e-10!23;CL:0000337!1.09e-10!23;CL:0000393!2.94e-10!39;CL:0000211!2.94e-10!39;CL:0000540!8.63e-09!33;CL:0000047!8.63e-09!33;CL:0000031!8.63e-09!33;CL:0000404!8.63e-09!33;CL:0002321!5.04e-08!70;CL:0000220!5.04e-08!70;CL:0000333!2.90e-07!10;CL:0000095!2.90e-07!10;CL:0000243!2.90e-07!10;CL:0000123!2.90e-07!10;CL:0000125!2.90e-07!10;CL:0000030!2.90e-07!10;CL:0000339!2.90e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.83e-22,43;CL:0000221,8.63e-22,44;CL:0000133,8.63e-22,44;CL:0000117,4.61e-19,23;CL:0000337,4.61e-19,23;CL:0002321,3.58e-15,70;CL:0000393,2.62e-14,39;CL:0000211,2.62e-14,39;CL:0002453,4.80e-14,8;CL:0000333,1.89e-13,10;CL:0000095,1.89e-13,10;CL:0000243,1.89e-13,10;CL:0000123,1.89e-13,10;CL:0000125,1.89e-13,10;CL:0000030,1.89e-13,10;CL:0000339,1.89e-13,10;CL:0000540,6.56e-12,33;CL:0000047,6.56e-12,33;CL:0000031,6.56e-12,33;CL:0000404,6.56e-12,33;CL:0000128,1.61e-11,6;CL:0000126,1.61e-11,6;CL:0000127,1.61e-11,6;CL:0000192,3.41e-07,3;CL:0000359,3.41e-07,3;CL:0002539,3.41e-07,3;CL:0000514,3.41e-07,3;CL:0002612,8.20e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.43e-21!75;UBERON:0001016!4.43e-21!75;UBERON:0001017!4.31e-20!73;UBERON:0005743!4.31e-20!73;UBERON:0001049!1.02e-14!52;UBERON:0005068!1.02e-14!52;UBERON:0006241!1.02e-14!52;UBERON:0007135!1.02e-14!52;UBERON:0004121!4.27e-14!102;UBERON:0000924!4.27e-14!102;UBERON:0006601!4.27e-14!102;UBERON:0000955!3.65e-13!50;UBERON:0006238!3.65e-13!50;UBERON:0002616!1.26e-12!49;UBERON:0002020!2.51e-12!34;UBERON:0002346!4.85e-11!71;UBERON:0003075!4.85e-11!71;UBERON:0007284!4.85e-11!71;UBERON:0000033!1.87e-10!63;UBERON:0002791!4.21e-09!29;UBERON:0003528!4.21e-09!29;UBERON:0001893!4.21e-09!29;UBERON:0003076!5.67e-09!12;UBERON:0003057!5.67e-09!12;UBERON:0000025!6.81e-09!114;UBERON:0003080!5.23e-08!40;UBERON:0004111!6.10e-08!122;UBERON:0002780!1.76e-07!39;UBERON:0001890!1.76e-07!39;UBERON:0006240!1.76e-07!39;UBERON:0003056!6.58e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.01e-34,75;UBERON:0001017,7.78e-34,73;UBERON:0000073,9.26e-28,54;UBERON:0001049,4.06e-25,52;UBERON:0005068,4.06e-25,52;UBERON:0006241,4.06e-25,52;UBERON:0007135,4.06e-25,52;UBERON:0004121,5.90e-25,95;UBERON:0000924,5.90e-25,95;UBERON:0006601,5.90e-25,95;UBERON:0002020,1.36e-19,34;UBERON:0002346,7.28e-19,64;UBERON:0003075,7.28e-19,64;UBERON:0007284,7.28e-19,64;UBERON:0000955,6.03e-18,47;UBERON:0006238,6.03e-18,47;UBERON:0003076,1.00e-17,12;UBERON:0003057,1.00e-17,12;UBERON:0002616,8.21e-17,46;UBERON:0010371,1.54e-15,73;UBERON:0003528,1.48e-12,29;UBERON:0002791,1.48e-12,29;UBERON:0001893,1.48e-12,29;UBERON:0002420,2.75e-12,8;UBERON:0007245,2.75e-12,8;UBERON:0010009,2.75e-12,8;UBERON:0010011,2.75e-12,8;UBERON:0000454,2.75e-12,8;UBERON:0002240,5.38e-12,6;UBERON:0005174,5.38e-12,6;UBERON:0001137,5.38e-12,6;UBERON:0003080,1.13e-11,40;UBERON:0010314,1.45e-11,92;UBERON:0000025,1.70e-11,114;UBERON:0002780,1.43e-10,39;UBERON:0001890,1.43e-10,39;UBERON:0006240,1.43e-10,39;UBERON:0001948,2.28e-10,5;UBERON:0002315,2.28e-10,5;UBERON:0004111,3.71e-10,122;UBERON:0003056,1.21e-08,49;UBERON:0000369,2.36e-08,5;UBERON:0002435,2.36e-08,5;UBERON:0000204,2.36e-08,5;UBERON:0010082,2.36e-08,5;UBERON:0004733,1.55e-07,6;UBERON:0004732,1.55e-07,6;UBERON:0002028,1.55e-07,6;UBERON:0007277,1.55e-07,6;UBERON:0011216,1.59e-07,194;UBERON:0001135,3.41e-07,3;UBERON:0004237,3.41e-07,3;UBERON:0004695,3.41e-07,3;UBERON:0002111,3.41e-07,3;UBERON:0004178,3.41e-07,3;UBERON:0002950,3.55e-07,4;UBERON:0001891,3.55e-07,4;UBERON:0009616,3.55e-07,4;UBERON:0010286,3.55e-07,4;UBERON:0002257,8.20e-07,3 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0,0.30246421130683,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.47997726838022,0,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05022180663233,5.67710814829281,19.2724089769766,2.34717403304412,4.57852828398938,1.75748946187577,3.88859798148567,7.55926676776958,4.31257693094915,0,0,0,0.514518872071894,0.286533439938757,0,2.83243045203437,2.11596391708813,1.26766280701236,0,3.55717918444456,0,0,0,1.49800055259202,1.92109152660777,0.103689612308478,0.540023753326763,0.210324961351382,3.99911378165325,6.40518768759679,0.979926393719632,0.766763768145891,0,2.20231761998777,1.91531007127782,3.68655679814984,1.71452174049252,2.01272815925301,2.6045668527838,1.67509799400829,1.68828783009504,1.98637722109853,2.65165726926301,6.54909731675874,5.21918448310842,1.28734528666413,0.906858721281426,0,0,0,0.539703191637817,0,0,0.842666520790511,0.511290967734173,0,0.70667914902068,0.281686839553361,0,0,0,0.216491041011214,0,0,0,1.03575153458869,0,0.346970653532272,0,0,0,0.470354828542819,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0,0,0,2.34224637609238,0.83778682725382,0,0.11981512450592,0,0,3.74476598512057,1.83000241127451,1.38219787324151,1.73824320192276,0.511430914660661,1.24672826735736,1.1356888414743,0.305518091550949,0,0.252722758433675,0,0.650602214813519,0.229902104433473,0.180062129805349,0.452114453507145,0,0,0.187403449119458,0.258703370739016,0.862271971731369,0.945530400839096,0.175951124163949,0,0,0.348252166522167,0,0.398068533636986,0.702213187313235,0,0,1.03562886267751,0.234526059981096,0.36012412292203,0,0.393528463494808,0.617068451549513,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0,0.219550115291051,0.134206418760372,1.68231958851302,0.92614151141356,0,0,0.213288250535234,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,1.51593129416388,0.651859905768103,0.509235257325564,0,0.502518772325447,0.476087281772027,0.195133647857799,0.630540576424764,0.8858587585951,0.637819074629948,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0,0.275936746304732,2.40825884981688,1.52375192569864,4.42624352517024,0,0,0.780877488593277,0.215423397732799,0.955875191810208,0.222798674082394,0.283076530788832,0,0.584511715822624,0,1.92792789853084,0.141940085208269,0,0,0.164970122972535,0,0.242780636154981,0.906970670894253,1.13163047853539,0.295301892880773,0.614870295887855,0,0,0,0.948110273807448,0,0,0,0.900305470156551,0.129358683782755,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0,0.484393280087717,0.120625849856312,0,0,0.291480836629851,3.52308073819968,0.341741761595705,0.206386867963223,0.555583582109135,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0,0,0.165306911450672,0,0,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0.295379054349154,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0,0,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0.501572104035363,2.25900737046827,1.38097570952153,1.14579102687879,0.68741272937475,0,1.5107877947794,2.02506750069542,0.45032120322422,0.453142408984205,0,0.31136204275253,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.561849044819294,0.384150914429216,0.34461281373368,2.85776214769844,0.463537303779422,0.578727661391115,0.412085900803307,0.735994600671987,0.685738504770831,0.177475806159338,0,0.290692833264657,0.376437521661322,0.169229215783353,0,0.526139422875686,0.543216455383447,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.385813221962283,0.499621155875892,0.935726433781634,0,0.57386499620653,0.661774257358546,0.231867835620421 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|phase1_expression=0.160148847104794,0.697950815278722,0,0.30246421130683,0,0.16787927191189,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.47997726838022,0,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05022180663233,5.67710814829281,19.2724089769766,2.34717403304412,4.57852828398938,1.75748946187577,3.88859798148567,7.55926676776958,4.31257693094915,0,0,0,0.514518872071894,0.286533439938757,0,2.83243045203437,2.11596391708813,1.26766280701236,0,3.55717918444456,0,0,0,1.49800055259202,1.92109152660777,0.103689612308478,0.540023753326763,0.210324961351382,3.99911378165325,6.40518768759679,0.979926393719632,0.766763768145891,0,2.20231761998777,1.91531007127782,3.68655679814984,1.71452174049252,2.01272815925301,2.6045668527838,1.67509799400829,1.68828783009504,1.98637722109853,2.65165726926301,6.54909731675874,5.21918448310842,1.28734528666413,0.906858721281426,0,0,0,0.539703191637817,0,0,0.842666520790511,0.511290967734173,0,0.70667914902068,0.281686839553361,0,0,0,0.216491041011214,0,0,0,1.03575153458869,0,0.346970653532272,0,0,0,0.470354828542819,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0,0,0,2.34224637609238,0.83778682725382,0,0.11981512450592,0,0,3.74476598512057,1.83000241127451,1.38219787324151,1.73824320192276,0.511430914660661,1.24672826735736,1.1356888414743,0.305518091550949,0,0.252722758433675,0,0.650602214813519,0.229902104433473,0.180062129805349,0.452114453507145,0,0,0.187403449119458,0.258703370739016,0.862271971731369,0.945530400839096,0.175951124163949,0,0,0.348252166522167,0,0.398068533636986,0.702213187313235,0,0,1.03562886267751,0.234526059981096,0.36012412292203,0,0.393528463494808,0.617068451549513,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0,0,0,0.219550115291051,0.134206418760372,1.68231958851302,0.92614151141356,0,0,0.213288250535234,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0,0,0.379335801906163,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,1.51593129416388,0.651859905768103,0.509235257325564,0,0.502518772325447,0.476087281772027,0.195133647857799,0.630540576424764,0.8858587585951,0.637819074629948,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0,0.275936746304732,2.40825884981688,1.52375192569864,4.42624352517024,0,0,0.780877488593277,0.215423397732799,0.955875191810208,0.222798674082394,0.283076530788832,0,0.584511715822624,0,1.92792789853084,0.141940085208269,0,0,0.164970122972535,0,0.242780636154981,0.906970670894253,1.13163047853539,0.295301892880773,0.614870295887855,0,0,0,0.948110273807448,0,0,0,0.900305470156551,0.129358683782755,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0,0.484393280087717,0.120625849856312,0,0,0.291480836629851,3.52308073819968,0.341741761595705,0.206386867963223,0.555583582109135,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0,0,0.165306911450672,0,0,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0.295379054349154,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0,0,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0.214368379079066,0.501572104035363,2.25900737046827,1.38097570952153,1.14579102687879,0.68741272937475,0,1.5107877947794,2.02506750069542,0.45032120322422,0.453142408984205,0,0.31136204275253,0.399024873401031,0.682934423016537,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.377252682772152,0.561849044819294,0.384150914429216,0.34461281373368,2.85776214769844,0.463537303779422,0.578727661391115,0.412085900803307,0.735994600671987,0.685738504770831,0.177475806159338,0,0.290692833264657,0.376437521661322,0.169229215783353,0,0.526139422875686,0.543216455383447,0.561142271657738,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.385813221962283,0.499621155875892,0.935726433781634,0,0.57386499620653,0.661774257358546,0.231867835620421 | ||
|short_description=p3@Lxn | |||
}} | }} |
Latest revision as of 16:05, 25 September 2015
Short description: | p3@Lxn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lxn_5end |
Coexpression cluster: | MCL_coexpression_mm9:2380 |
Association with transcript: | 154bp_to_ENSMUST00000160202_5end |
EntrezGene: | Lxn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.83e-22 | 43 |
ectodermal cell | 8.63e-22 | 44 |
neurectodermal cell | 8.63e-22 | 44 |
CNS neuron (sensu Vertebrata) | 4.61e-19 | 23 |
neuroblast (sensu Vertebrata) | 4.61e-19 | 23 |
embryonic cell | 3.58e-15 | 70 |
electrically responsive cell | 2.62e-14 | 39 |
electrically active cell | 2.62e-14 | 39 |
oligodendrocyte precursor cell | 4.80e-14 | 8 |
migratory neural crest cell | 1.89e-13 | 10 |
neuron associated cell | 1.89e-13 | 10 |
glial cell (sensu Vertebrata) | 1.89e-13 | 10 |
neuron associated cell (sensu Vertebrata) | 1.89e-13 | 10 |
glial cell | 1.89e-13 | 10 |
glioblast | 1.89e-13 | 10 |
glioblast (sensu Vertebrata) | 1.89e-13 | 10 |
neuron | 6.56e-12 | 33 |
neuronal stem cell | 6.56e-12 | 33 |
neuroblast | 6.56e-12 | 33 |
electrically signaling cell | 6.56e-12 | 33 |
oligodendrocyte | 1.61e-11 | 6 |
macroglial cell | 1.61e-11 | 6 |
astrocyte | 1.61e-11 | 6 |
smooth muscle cell | 3.41e-07 | 3 |
vascular associated smooth muscle cell | 3.41e-07 | 3 |
aortic smooth muscle cell | 3.41e-07 | 3 |
smooth muscle myoblast | 3.41e-07 | 3 |
neuron of the ventral spinal cord | 8.20e-07 | 3 |