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FFCP PHASE1:Mm9::chr2:129418872..129418883,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:129418872..129418883,+
|DHSsupport=NA
|short_description=p16@Sirpa
|DPIdataset=NA
|description=CAGE_peak_16_at_Sirpa_5end
|association_with_transcript=-47bp_to_NM_001177647,NM_007547,uc008mia.2,uc008mib.2_5end
|EntrezGene=19261
|EntrezGene=19261
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P97797,Q6P6I8
|UniProt=P97797,Q6P6I8
|association_with_transcript=-47bp_to_NM_001177647,NM_007547,uc008mia.2,uc008mib.2_5end
|cluster_id=chr2:129418872..129418883,+
|description=CAGE_peak_16_at_Sirpa_5end
|id=chr2:129418872..129418883,+
|ontology_enrichment_celltype=CL:0000117!2.93e-13!23;CL:0000337!2.93e-13!23;CL:0000221!7.34e-13!44;CL:0000133!7.34e-13!44;CL:0002319!1.41e-12!43;CL:0000055!8.47e-10!50;CL:0000540!1.87e-09!33;CL:0000047!1.87e-09!33;CL:0000031!1.87e-09!33;CL:0000404!1.87e-09!33;CL:0000393!2.49e-07!39;CL:0000211!2.49e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-17,23;CL:0000337,1.87e-17,23;CL:0002319,1.91e-15,43;CL:0000221,5.73e-15,44;CL:0000133,5.73e-15,44;CL:0000540,5.96e-11,33;CL:0000047,5.96e-11,33;CL:0000031,5.96e-11,33;CL:0000404,5.96e-11,33;CL:0000393,1.12e-08,39;CL:0000211,1.12e-08,39;CL:0002321,1.99e-07,70;CL:0002610,2.34e-07,3;CL:0002453,3.00e-07,8;CL:0002614,5.87e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.30e-33!73;UBERON:0005743!8.30e-33!73;UBERON:0000073!1.08e-32!75;UBERON:0001016!1.08e-32!75;UBERON:0001049!1.55e-30!52;UBERON:0005068!1.55e-30!52;UBERON:0006241!1.55e-30!52;UBERON:0007135!1.55e-30!52;UBERON:0000955!7.30e-30!50;UBERON:0006238!7.30e-30!50;UBERON:0000033!1.37e-29!63;UBERON:0002616!5.28e-29!49;UBERON:0004121!3.70e-28!102;UBERON:0000924!3.70e-28!102;UBERON:0006601!3.70e-28!102;UBERON:0002346!9.92e-27!71;UBERON:0003075!9.92e-27!71;UBERON:0007284!9.92e-27!71;UBERON:0003056!1.27e-23!49;UBERON:0003080!2.14e-22!40;UBERON:0002780!1.47e-21!39;UBERON:0001890!1.47e-21!39;UBERON:0006240!1.47e-21!39;UBERON:0002020!3.14e-21!34;UBERON:0002791!4.44e-18!29;UBERON:0003528!4.44e-18!29;UBERON:0001893!4.44e-18!29;UBERON:0007811!1.28e-15!86;UBERON:0000153!3.51e-14!94;UBERON:0000956!1.57e-12!21;UBERON:0001869!1.57e-12!21;UBERON:0000203!1.57e-12!21;UBERON:0002619!6.55e-11!17;UBERON:0002021!5.33e-09!10;UBERON:0000411!5.33e-09!10;UBERON:0001950!5.33e-09!10;UBERON:0003076!1.79e-08!12;UBERON:0003057!1.79e-08!12;UBERON:0000025!8.30e-08!114;UBERON:0002420!8.29e-07!8;UBERON:0007245!8.29e-07!8;UBERON:0010009!8.29e-07!8;UBERON:0010011!8.29e-07!8;UBERON:0000454!8.29e-07!8;UBERON:0004111!9.46e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.07e-44,73;UBERON:0001016,3.06e-43,75;UBERON:0000073,1.44e-41,54;UBERON:0001049,1.11e-37,52;UBERON:0005068,1.11e-37,52;UBERON:0006241,1.11e-37,52;UBERON:0007135,1.11e-37,52;UBERON:0004121,1.04e-33,95;UBERON:0000924,1.04e-33,95;UBERON:0006601,1.04e-33,95;UBERON:0000955,9.51e-33,47;UBERON:0006238,9.51e-33,47;UBERON:0002020,1.35e-32,34;UBERON:0002616,4.52e-31,46;UBERON:0002346,8.20e-31,64;UBERON:0003075,8.20e-31,64;UBERON:0007284,8.20e-31,64;UBERON:0003528,8.25e-28,29;UBERON:0002791,8.25e-28,29;UBERON:0001893,8.25e-28,29;UBERON:0010371,6.57e-26,73;UBERON:0003080,6.39e-25,40;UBERON:0002780,2.63e-23,39;UBERON:0001890,2.63e-23,39;UBERON:0006240,2.63e-23,39;UBERON:0003056,8.91e-21,49;UBERON:0002021,1.96e-19,10;UBERON:0000411,1.96e-19,10;UBERON:0001950,1.96e-19,10;UBERON:0010314,1.03e-18,92;UBERON:0002619,2.36e-17,17;UBERON:0000956,1.12e-15,21;UBERON:0001869,1.12e-15,21;UBERON:0000203,1.12e-15,21;UBERON:0002420,3.50e-14,8;UBERON:0007245,3.50e-14,8;UBERON:0010009,3.50e-14,8;UBERON:0010011,3.50e-14,8;UBERON:0000454,3.50e-14,8;UBERON:0003076,4.33e-13,12;UBERON:0003057,4.33e-13,12;UBERON:0000025,1.94e-12,114;UBERON:0004111,4.60e-11,122;UBERON:0011216,1.73e-10,194;UBERON:0000369,7.73e-09,5;UBERON:0002435,7.73e-09,5;UBERON:0000204,7.73e-09,5;UBERON:0010082,7.73e-09,5;UBERON:0002950,8.07e-09,4;UBERON:0001891,8.07e-09,4;UBERON:0009616,8.07e-09,4;UBERON:0010286,8.07e-09,4;UBERON:0002240,2.11e-07,6;UBERON:0005174,2.11e-07,6;UBERON:0001137,2.11e-07,6;UBERON:0004684,2.34e-07,3;UBERON:0002275,2.34e-07,3;UBERON:0004733,3.34e-07,6;UBERON:0004732,3.34e-07,6;UBERON:0002028,3.34e-07,6;UBERON:0007277,3.34e-07,6;UBERON:0002038,5.87e-07,3;UBERON:0009663,5.87e-07,3;UBERON:0009661,5.87e-07,3;UBERON:0000125,5.87e-07,3;UBERON:0002308,5.87e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0,0,0.125896817975577,0.101376931219515,0,2.34717403304412,1.30815093828268,0.878744730937887,1.1665793944457,0,1.43752564364972,0,0,0,0,0,0,2.02316460859598,1.05798195854407,1.26766280701236,0.677689064138264,0.889294796111139,0.449949858640699,0,0,1.19840044207362,2.30530983192933,0.725827286159344,0.675029691658453,0.210324961351382,0.856952953211411,1.54607978666129,0.857435594504678,0.575072826109418,0,3.30347642998166,4.08599481872601,5.83704826373725,1.58263545276233,1.64677758484337,2.08365348222704,2.51264699101243,2.8138130501584,4.5839474333043,2.06240009831567,1.99320353118744,1.3047961207771,0.075726193333184,0.151143120213571,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0,0,0,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.585561594023094,1.67557365450764,0,0,0,0,3.59497534571574,1.37250180845588,2.01046963380583,2.25971616249959,2.30143911597297,3.1168206683934,1.46017136760982,0,0.248813941220186,0,0.631325567659422,0.390361328888111,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.562210347358373,1.29351685369508,0,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0.134206418760372,3.78521907415429,1.23485534855141,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0.144649058581512,0,4.89515115436839,0,0,1.9266070798535,1.28932855251423,0.163934945376675,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0,0,0.584511715822624,0,3.21321316421807,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.720244376125241,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0.16488625294148,0.484393280087717,0.241251699712623,0,0,0,2.41052892613663,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.583353565032143,0.387479470433193,0.168956125490778,0.234714477291508,0.2604087696879,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,3.3885110557024,3.22227665555024,2.86447756719698,8.07709957015332,4.7955776383945,2.2661816921691,2.70009000092722,1.35096360967266,4.53142408984205,3.62432218226274,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0.192075457214608,0.229741875822453,0,0.463537303779422,0,1.23625770240992,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0.749431733813838,0,0,0.191288332068843,0,0
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0.255129870453209,0,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0,0,0.125896817975577,0.101376931219515,0,2.34717403304412,1.30815093828268,0.878744730937887,1.1665793944457,0,1.43752564364972,0,0,0,0,0,0,2.02316460859598,1.05798195854407,1.26766280701236,0.677689064138264,0.889294796111139,0.449949858640699,0,0,1.19840044207362,2.30530983192933,0.725827286159344,0.675029691658453,0.210324961351382,0.856952953211411,1.54607978666129,0.857435594504678,0.575072826109418,0,3.30347642998166,4.08599481872601,5.83704826373725,1.58263545276233,1.64677758484337,2.08365348222704,2.51264699101243,2.8138130501584,4.5839474333043,2.06240009831567,1.99320353118744,1.3047961207771,0.075726193333184,0.151143120213571,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0,0,0,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.585561594023094,1.67557365450764,0,0,0,0,3.59497534571574,1.37250180845588,2.01046963380583,2.25971616249959,2.30143911597297,3.1168206683934,1.46017136760982,0,0.248813941220186,0,0.631325567659422,0.390361328888111,0,0.180062129805349,0.150704817835715,0.204109497453984,0.2562274405697,0.562210347358373,1.29351685369508,0,0.189106080167819,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0,0,0.268273401399619,0,0,0,0.0810688095458557,0,0,0.134206418760372,3.78521907415429,1.23485534855141,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0.144649058581512,0,4.89515115436839,0,0,1.9266070798535,1.28932855251423,0.163934945376675,0.252470927204373,0,0,0.430846795465598,0,0.222798674082394,0,0,0.584511715822624,0,3.21321316421807,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.680879211507576,0.720244376125241,0.129358683782755,0.428674070063185,0.177340233642274,0.356737635204141,0.493647061806363,0.304464949114599,0,0,0,0.16488625294148,0.484393280087717,0.241251699712623,0,0,0,2.41052892613663,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0.583353565032143,0.387479470433193,0.168956125490778,0.234714477291508,0.2604087696879,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,3.3885110557024,3.22227665555024,2.86447756719698,8.07709957015332,4.7955776383945,2.2661816921691,2.70009000092722,1.35096360967266,4.53142408984205,3.62432218226274,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0,0.280924522409647,0.192075457214608,0.229741875822453,0,0.463537303779422,0,1.23625770240992,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0.749431733813838,0,0,0.191288332068843,0,0
|short_description=p16@Sirpa
}}
}}

Latest revision as of 17:24, 25 September 2015

Short description:p16@Sirpa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_16_at_Sirpa_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -47bp_to_NM_001177647, NM_007547, uc008mia.2, uc008mib.2_5end
EntrezGene:Sirpa
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p16@Sirpa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.07e-4473
nervous system3.06e-4375
regional part of nervous system1.44e-4154
neural tube1.11e-3752
neural rod1.11e-3752
future spinal cord1.11e-3752
neural keel1.11e-3752
ectoderm-derived structure1.04e-3395
ectoderm1.04e-3395
presumptive ectoderm1.04e-3395
brain9.51e-3347
future brain9.51e-3347
gray matter1.35e-3234
regional part of brain4.52e-3146
neurectoderm8.20e-3164
neural plate8.20e-3164
presumptive neural plate8.20e-3164
brain grey matter8.25e-2829
regional part of telencephalon8.25e-2829
telencephalon8.25e-2829
ecto-epithelium6.57e-2673
anterior neural tube6.39e-2540
regional part of forebrain2.63e-2339
forebrain2.63e-2339
future forebrain2.63e-2339
pre-chordal neural plate8.91e-2149
occipital lobe1.96e-1910
visual cortex1.96e-1910
neocortex1.96e-1910
structure with developmental contribution from neural crest1.03e-1892
regional part of cerebral cortex2.36e-1717
cerebral cortex1.12e-1521
cerebral hemisphere1.12e-1521
pallium1.12e-1521
basal ganglion3.50e-148
nuclear complex of neuraxis3.50e-148
aggregate regional part of brain3.50e-148
collection of basal ganglia3.50e-148
cerebral subcortex3.50e-148
posterior neural tube4.33e-1312
chordal neural plate4.33e-1312
tube1.94e-12114
anatomical conduit4.60e-11122
organ system subdivision1.73e-10194
corpus striatum7.73e-095
striatum7.73e-095
ventral part of telencephalon7.73e-095
future corpus striatum7.73e-095
regional part of midbrain8.07e-094
midbrain8.07e-094
presumptive midbrain8.07e-094
midbrain neural tube8.07e-094
spinal cord2.11e-076
dorsal region element2.11e-076
dorsum2.11e-076
raphe nuclei2.34e-073
reticular formation2.34e-073
segmental subdivision of hindbrain3.34e-076
segmental subdivision of nervous system3.34e-076
hindbrain3.34e-076
presumptive hindbrain3.34e-076
substantia nigra5.87e-073
telencephalic nucleus5.87e-073
midbrain nucleus5.87e-073
neural nucleus5.87e-073
nucleus of brain5.87e-073
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