FFCP PHASE1:Mm9::chr19:42330194..42330251,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=71146|HGNC=|MCL_coexpression_id=1|UniProt=Q9D428|association_with_transcript=0bp_to_ENSMUST00000087123,NM_027694,uc008hnn.2_5end|description=CAGE_peak_1_at_Golga7b_5end|id=chr19:42330194..42330251,+|ontology_enrichment_celltype=CL:0000117!9.09e-17!23;CL:0000337!9.09e-17!23;CL:0000540!7.76e-15!33;CL:0000047!7.76e-15!33;CL:0000031!7.76e-15!33;CL:0000404!7.76e-15!33;CL:0000221!1.07e-11!44;CL:0000133!1.07e-11!44;CL:0002319!1.60e-11!43;CL:0000393!1.44e-10!39;CL:0000211!1.44e-10!39;CL:0000055!4.24e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-28,23;CL:0000337,1.22e-28,23;CL:0000540,2.22e-19,33;CL:0000047,2.22e-19,33;CL:0000031,2.22e-19,33;CL:0000404,2.22e-19,33;CL:0000393,2.88e-15,39;CL:0000211,2.88e-15,39;CL:0002319,3.50e-13,43;CL:0000221,1.01e-12,44;CL:0000133,1.01e-12,44;CL:0002609,3.66e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.66e-30!102;UBERON:0000924!2.66e-30!102;UBERON:0006601!2.66e-30!102;UBERON:0000073!4.87e-30!75;UBERON:0001016!4.87e-30!75;UBERON:0001017!2.24e-29!73;UBERON:0005743!2.24e-29!73;UBERON:0001049!5.71e-27!52;UBERON:0005068!5.71e-27!52;UBERON:0006241!5.71e-27!52;UBERON:0007135!5.71e-27!52;UBERON:0002346!7.83e-27!71;UBERON:0003075!7.83e-27!71;UBERON:0007284!7.83e-27!71;UBERON:0000955!1.51e-25!50;UBERON:0006238!1.51e-25!50;UBERON:0002616!6.80e-25!49;UBERON:0000033!8.11e-24!63;UBERON:0002020!2.71e-21!34;UBERON:0003080!3.00e-20!40;UBERON:0003056!1.13e-19!49;UBERON:0002780!1.33e-19!39;UBERON:0001890!1.33e-19!39;UBERON:0006240!1.33e-19!39;UBERON:0002791!1.40e-17!29;UBERON:0003528!1.40e-17!29;UBERON:0001893!1.40e-17!29;UBERON:0007811!3.19e-12!86;UBERON:0000956!3.96e-12!21;UBERON:0001869!3.96e-12!21;UBERON:0000203!3.96e-12!21;UBERON:0002619!7.10e-10!17;UBERON:0000153!1.92e-09!94;UBERON:0002021!2.72e-09!10;UBERON:0000411!2.72e-09!10;UBERON:0001950!2.72e-09!10;UBERON:0003076!3.29e-07!12;UBERON:0003057!3.29e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.66e-47,54;UBERON:0001049,3.16e-44,52;UBERON:0005068,3.16e-44,52;UBERON:0006241,3.16e-44,52;UBERON:0007135,3.16e-44,52;UBERON:0001017,8.34e-43,73;UBERON:0001016,2.87e-41,75;UBERON:0002020,5.60e-38,34;UBERON:0000955,2.74e-37,47;UBERON:0006238,2.74e-37,47;UBERON:0002346,8.12e-37,64;UBERON:0003075,8.12e-37,64;UBERON:0007284,8.12e-37,64;UBERON:0002616,3.66e-36,46;UBERON:0010371,1.89e-35,73;UBERON:0004121,3.58e-35,95;UBERON:0000924,3.58e-35,95;UBERON:0006601,3.58e-35,95;UBERON:0003080,4.15e-33,40;UBERON:0002780,5.81e-32,39;UBERON:0001890,5.81e-32,39;UBERON:0006240,5.81e-32,39;UBERON:0003528,2.68e-31,29;UBERON:0002791,2.68e-31,29;UBERON:0001893,2.68e-31,29;UBERON:0003056,1.18e-26,49;UBERON:0010314,1.56e-21,92;UBERON:0000956,1.66e-21,21;UBERON:0001869,1.66e-21,21;UBERON:0000203,1.66e-21,21;UBERON:0002619,1.78e-17,17;UBERON:0002021,2.60e-15,10;UBERON:0000411,2.60e-15,10;UBERON:0001950,2.60e-15,10;UBERON:0000025,3.42e-13,114;UBERON:0004111,1.57e-11,122;UBERON:0003076,7.78e-11,12;UBERON:0003057,7.78e-11,12;UBERON:0002420,9.23e-11,8;UBERON:0007245,9.23e-11,8;UBERON:0010009,9.23e-11,8;UBERON:0010011,9.23e-11,8;UBERON:0000454,9.23e-11,8;UBERON:0002240,9.28e-09,6;UBERON:0005174,9.28e-09,6;UBERON:0001137,9.28e-09,6;UBERON:0001948,1.19e-07,5;UBERON:0002315,1.19e-07,5;UBERON:0011216,3.40e-07,194;UBERON:0000483,4.17e-07,174;UBERON:0002950,6.21e-07,4;UBERON:0001891,6.21e-07,4;UBERON:0009616,6.21e-07,4;UBERON:0010286,6.21e-07,4;UBERON:0000119,6.92e-07,176|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0.671517087647559,0.467225281191051,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,0.47997726838022,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0,0.665191531965914,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,10.3181395038395,8.46385566835253,9.50747105259269,0,0,0,0,0,0.599200221036809,0,4.56234294157302,3.24014251996058,3.15487442027073,17.424710048632,10.1599528837742,5.38959516545798,3.54628242767475,8.27296907949019,15.4162233399144,18.0039146700115,20.4296689230804,7.91317726381163,7.50198677539759,4.16730696445408,29.314214895145,23.0732670112989,16.9606055032259,10.3120004915784,13.6676813567139,8.57437450796383,0.37863096666592,0.982430281388212,0,0,0,0,0,0,1.12355536105401,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,0,0,0,0.608930956624282,0.691846491768175,0.753613202763113,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,13.7606974595427,22.6202443358531,0,0,0,0,7.48953197024113,5.03250663100489,5.15182843662744,12.8629996942285,18.6672283851141,6.64921742590592,8.11206315338788,0,0,0,0.631325567659422,0,0,1.26043490863744,0.60281927134286,0.0680364991513279,0.2562274405697,0.562210347358373,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83217783969334,5.76265829323993,0,0,0,0,0,0.403367049246685,0,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,5.9403718295483,7.61875962849321,0,0,0.631016438832513,0.390438744296638,1.72338718186239,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0.790575555893047,5.46246237917072,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0.885905678642318,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,1.02131881726136,0.18006109403131,0,0.643011105094777,0.177340233642274,1.24858172321449,1.15184314421485,1.522324745573,0,0,0,0.98931751764888,0.161464426695906,2.29189114726992,3.34242563208782,2.62625439592098,0,8.34413859047294,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0.187682475451182,0,0,0,14.1187960654267,18.8733346967943,13.1765968091061,19.5912627871804,19.8673930733486,16.6186657425734,22.9507650078814,22.9663813644352,14.5005570874945,21.2281727818246,0.31136204275253,0,0.512200817262403,0.729320151204882,1.67690530102386,1.10306105070008,0.666740183404846,0.412070114477788,0,1.01078884705519,0.50695859978048,0.377252682772152,0.655490552289177,1.02440243847791,0.861532034334199,1.42888107384922,0.579421629724277,0,1.23625770240992,0.735994600671987,0,0.887379030796687,1.43061713968393,0.726732083161643,0.658765662907314,0.761531471025089,0.73171189149109,0.263069711437843,0.543216455383447,0.561142271657738,0.830445126869219,1.77308068276014,1.63692417267876,1.54936841185966,0.578719832943424,1.49886346762768,0.467863216890817,0.429742108096597,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p1@Golga7b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71146 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D428 | |||
|association_with_transcript=0bp_to_ENSMUST00000087123,NM_027694,uc008hnn.2_5end | |||
|cluster_id=chr19:42330194..42330251,+ | |||
|description=CAGE_peak_1_at_Golga7b_5end | |||
|id=chr19:42330194..42330251,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.09e-17!23;CL:0000337!9.09e-17!23;CL:0000540!7.76e-15!33;CL:0000047!7.76e-15!33;CL:0000031!7.76e-15!33;CL:0000404!7.76e-15!33;CL:0000221!1.07e-11!44;CL:0000133!1.07e-11!44;CL:0002319!1.60e-11!43;CL:0000393!1.44e-10!39;CL:0000211!1.44e-10!39;CL:0000055!4.24e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.22e-28,23;CL:0000337,1.22e-28,23;CL:0000540,2.22e-19,33;CL:0000047,2.22e-19,33;CL:0000031,2.22e-19,33;CL:0000404,2.22e-19,33;CL:0000393,2.88e-15,39;CL:0000211,2.88e-15,39;CL:0002319,3.50e-13,43;CL:0000221,1.01e-12,44;CL:0000133,1.01e-12,44;CL:0002609,3.66e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.66e-30!102;UBERON:0000924!2.66e-30!102;UBERON:0006601!2.66e-30!102;UBERON:0000073!4.87e-30!75;UBERON:0001016!4.87e-30!75;UBERON:0001017!2.24e-29!73;UBERON:0005743!2.24e-29!73;UBERON:0001049!5.71e-27!52;UBERON:0005068!5.71e-27!52;UBERON:0006241!5.71e-27!52;UBERON:0007135!5.71e-27!52;UBERON:0002346!7.83e-27!71;UBERON:0003075!7.83e-27!71;UBERON:0007284!7.83e-27!71;UBERON:0000955!1.51e-25!50;UBERON:0006238!1.51e-25!50;UBERON:0002616!6.80e-25!49;UBERON:0000033!8.11e-24!63;UBERON:0002020!2.71e-21!34;UBERON:0003080!3.00e-20!40;UBERON:0003056!1.13e-19!49;UBERON:0002780!1.33e-19!39;UBERON:0001890!1.33e-19!39;UBERON:0006240!1.33e-19!39;UBERON:0002791!1.40e-17!29;UBERON:0003528!1.40e-17!29;UBERON:0001893!1.40e-17!29;UBERON:0007811!3.19e-12!86;UBERON:0000956!3.96e-12!21;UBERON:0001869!3.96e-12!21;UBERON:0000203!3.96e-12!21;UBERON:0002619!7.10e-10!17;UBERON:0000153!1.92e-09!94;UBERON:0002021!2.72e-09!10;UBERON:0000411!2.72e-09!10;UBERON:0001950!2.72e-09!10;UBERON:0003076!3.29e-07!12;UBERON:0003057!3.29e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.66e-47,54;UBERON:0001049,3.16e-44,52;UBERON:0005068,3.16e-44,52;UBERON:0006241,3.16e-44,52;UBERON:0007135,3.16e-44,52;UBERON:0001017,8.34e-43,73;UBERON:0001016,2.87e-41,75;UBERON:0002020,5.60e-38,34;UBERON:0000955,2.74e-37,47;UBERON:0006238,2.74e-37,47;UBERON:0002346,8.12e-37,64;UBERON:0003075,8.12e-37,64;UBERON:0007284,8.12e-37,64;UBERON:0002616,3.66e-36,46;UBERON:0010371,1.89e-35,73;UBERON:0004121,3.58e-35,95;UBERON:0000924,3.58e-35,95;UBERON:0006601,3.58e-35,95;UBERON:0003080,4.15e-33,40;UBERON:0002780,5.81e-32,39;UBERON:0001890,5.81e-32,39;UBERON:0006240,5.81e-32,39;UBERON:0003528,2.68e-31,29;UBERON:0002791,2.68e-31,29;UBERON:0001893,2.68e-31,29;UBERON:0003056,1.18e-26,49;UBERON:0010314,1.56e-21,92;UBERON:0000956,1.66e-21,21;UBERON:0001869,1.66e-21,21;UBERON:0000203,1.66e-21,21;UBERON:0002619,1.78e-17,17;UBERON:0002021,2.60e-15,10;UBERON:0000411,2.60e-15,10;UBERON:0001950,2.60e-15,10;UBERON:0000025,3.42e-13,114;UBERON:0004111,1.57e-11,122;UBERON:0003076,7.78e-11,12;UBERON:0003057,7.78e-11,12;UBERON:0002420,9.23e-11,8;UBERON:0007245,9.23e-11,8;UBERON:0010009,9.23e-11,8;UBERON:0010011,9.23e-11,8;UBERON:0000454,9.23e-11,8;UBERON:0002240,9.28e-09,6;UBERON:0005174,9.28e-09,6;UBERON:0001137,9.28e-09,6;UBERON:0001948,1.19e-07,5;UBERON:0002315,1.19e-07,5;UBERON:0011216,3.40e-07,194;UBERON:0000483,4.17e-07,174;UBERON:0002950,6.21e-07,4;UBERON:0001891,6.21e-07,4;UBERON:0009616,6.21e-07,4;UBERON:0010286,6.21e-07,4;UBERON:0000119,6.92e-07,176 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0.671517087647559,0.467225281191051,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,0.47997726838022,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0,0.665191531965914,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,10.3181395038395,8.46385566835253,9.50747105259269,0,0,0,0,0,0.599200221036809,0,4.56234294157302,3.24014251996058,3.15487442027073,17.424710048632,10.1599528837742,5.38959516545798,3.54628242767475,8.27296907949019,15.4162233399144,18.0039146700115,20.4296689230804,7.91317726381163,7.50198677539759,4.16730696445408,29.314214895145,23.0732670112989,16.9606055032259,10.3120004915784,13.6676813567139,8.57437450796383,0.37863096666592,0.982430281388212,0,0,0,0,0,0,1.12355536105401,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,0,0,0,0.608930956624282,0.691846491768175,0.753613202763113,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,13.7606974595427,22.6202443358531,0,0,0,0,7.48953197024113,5.03250663100489,5.15182843662744,12.8629996942285,18.6672283851141,6.64921742590592,8.11206315338788,0,0,0,0.631325567659422,0,0,1.26043490863744,0.60281927134286,0.0680364991513279,0.2562274405697,0.562210347358373,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.83217783969334,5.76265829323993,0,0,0,0,0,0.403367049246685,0,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,5.9403718295483,7.61875962849321,0,0,0.631016438832513,0.390438744296638,1.72338718186239,0.238968797952552,0.222798674082394,0.566153061577665,0,0,0.790575555893047,5.46246237917072,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0.885905678642318,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,1.02131881726136,0.18006109403131,0,0.643011105094777,0.177340233642274,1.24858172321449,1.15184314421485,1.522324745573,0,0,0,0.98931751764888,0.161464426695906,2.29189114726992,3.34242563208782,2.62625439592098,0,8.34413859047294,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.404593039154462,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0.187682475451182,0,0,0,14.1187960654267,18.8733346967943,13.1765968091061,19.5912627871804,19.8673930733486,16.6186657425734,22.9507650078814,22.9663813644352,14.5005570874945,21.2281727818246,0.31136204275253,0,0.512200817262403,0.729320151204882,1.67690530102386,1.10306105070008,0.666740183404846,0.412070114477788,0,1.01078884705519,0.50695859978048,0.377252682772152,0.655490552289177,1.02440243847791,0.861532034334199,1.42888107384922,0.579421629724277,0,1.23625770240992,0.735994600671987,0,0.887379030796687,1.43061713968393,0.726732083161643,0.658765662907314,0.761531471025089,0.73171189149109,0.263069711437843,0.543216455383447,0.561142271657738,0.830445126869219,1.77308068276014,1.63692417267876,1.54936841185966,0.578719832943424,1.49886346762768,0.467863216890817,0.429742108096597,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Golga7b | |||
}} |
Latest revision as of 19:12, 25 September 2015
Short description: | p1@Golga7b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Golga7b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000087123, NM_027694, uc008hnn.2_5end |
EntrezGene: | Golga7b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.22e-28 | 23 |
neuroblast (sensu Vertebrata) | 1.22e-28 | 23 |
neuron | 2.22e-19 | 33 |
neuronal stem cell | 2.22e-19 | 33 |
neuroblast | 2.22e-19 | 33 |
electrically signaling cell | 2.22e-19 | 33 |
electrically responsive cell | 2.88e-15 | 39 |
electrically active cell | 2.88e-15 | 39 |
neural cell | 3.50e-13 | 43 |
ectodermal cell | 1.01e-12 | 44 |
neurectodermal cell | 1.01e-12 | 44 |
neuron of cerebral cortex | 3.66e-07 | 6 |