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FFCP PHASE1:Mm9::chr9:107302374..107302395,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:107302374..107302395,+
|DHSsupport=NA
|short_description=p2@Cacna2d2
|DPIdataset=NA
|description=CAGE_peak_2_at_Cacna2d2_5end
|association_with_transcript=-4bp_to_ENSMUST00000166799,ENSMUST00000170737_5end
|EntrezGene=56808
|EntrezGene=56808
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q6PHS9
|UniProt=Q6PHS9
|association_with_transcript=-4bp_to_ENSMUST00000166799,ENSMUST00000170737_5end
|cluster_id=chr9:107302374..107302395,+
|description=CAGE_peak_2_at_Cacna2d2_5end
|id=chr9:107302374..107302395,+
|ontology_enrichment_celltype=CL:0000117!1.98e-13!23;CL:0000337!1.98e-13!23;CL:0000540!5.30e-08!33;CL:0000047!5.30e-08!33;CL:0000031!5.30e-08!33;CL:0000404!5.30e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-16,23;CL:0000337,1.24e-16,23;CL:0000540,3.16e-11,33;CL:0000047,3.16e-11,33;CL:0000031,3.16e-11,33;CL:0000404,3.16e-11,33;CL:0000393,1.09e-08,39;CL:0000211,1.09e-08,39;CL:0002319,2.07e-07,43;CL:0000221,3.94e-07,44;CL:0000133,3.94e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.41e-25!63;UBERON:0001049!2.22e-24!52;UBERON:0005068!2.22e-24!52;UBERON:0006241!2.22e-24!52;UBERON:0007135!2.22e-24!52;UBERON:0000955!6.00e-23!50;UBERON:0006238!6.00e-23!50;UBERON:0001017!2.68e-22!73;UBERON:0005743!2.68e-22!73;UBERON:0002616!3.18e-22!49;UBERON:0002346!6.28e-22!71;UBERON:0003075!6.28e-22!71;UBERON:0007284!6.28e-22!71;UBERON:0000073!8.11e-22!75;UBERON:0001016!8.11e-22!75;UBERON:0004121!3.03e-19!102;UBERON:0000924!3.03e-19!102;UBERON:0006601!3.03e-19!102;UBERON:0003056!4.04e-19!49;UBERON:0003080!4.59e-17!40;UBERON:0002780!2.88e-16!39;UBERON:0001890!2.88e-16!39;UBERON:0006240!2.88e-16!39;UBERON:0002020!5.88e-16!34;UBERON:0000153!1.18e-13!94;UBERON:0007811!1.24e-13!86;UBERON:0002791!2.48e-12!29;UBERON:0003528!2.48e-12!29;UBERON:0001893!2.48e-12!29;UBERON:0003076!5.40e-08!12;UBERON:0003057!5.40e-08!12;UBERON:0000025!1.45e-07!114;UBERON:0002420!3.13e-07!8;UBERON:0007245!3.13e-07!8;UBERON:0010009!3.13e-07!8;UBERON:0010011!3.13e-07!8;UBERON:0000454!3.13e-07!8;UBERON:0004111!3.53e-07!122;UBERON:0002619!4.73e-07!17;UBERON:0000956!4.86e-07!21;UBERON:0001869!4.86e-07!21;UBERON:0000203!4.86e-07!21;UBERON:0002021!5.13e-07!10;UBERON:0000411!5.13e-07!10;UBERON:0001950!5.13e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.47e-35,54;UBERON:0001017,6.63e-33,73;UBERON:0001049,3.04e-32,52;UBERON:0005068,3.04e-32,52;UBERON:0006241,3.04e-32,52;UBERON:0007135,3.04e-32,52;UBERON:0001016,1.15e-31,75;UBERON:0002346,3.48e-30,64;UBERON:0003075,3.48e-30,64;UBERON:0007284,3.48e-30,64;UBERON:0004121,3.14e-27,95;UBERON:0000924,3.14e-27,95;UBERON:0006601,3.14e-27,95;UBERON:0010371,2.39e-26,73;UBERON:0000955,1.25e-25,47;UBERON:0006238,1.25e-25,47;UBERON:0002616,1.84e-24,46;UBERON:0010314,2.19e-24,92;UBERON:0002020,1.05e-22,34;UBERON:0003056,5.31e-21,49;UBERON:0003080,8.55e-21,40;UBERON:0002780,1.69e-19,39;UBERON:0001890,1.69e-19,39;UBERON:0006240,1.69e-19,39;UBERON:0003528,1.80e-16,29;UBERON:0002791,1.80e-16,29;UBERON:0001893,1.80e-16,29;UBERON:0000025,1.45e-12,114;UBERON:0003076,3.73e-12,12;UBERON:0003057,3.73e-12,12;UBERON:0002420,5.88e-12,8;UBERON:0007245,5.88e-12,8;UBERON:0010009,5.88e-12,8;UBERON:0010011,5.88e-12,8;UBERON:0000454,5.88e-12,8;UBERON:0004111,9.77e-12,122;UBERON:0002021,1.44e-11,10;UBERON:0000411,1.44e-11,10;UBERON:0001950,1.44e-11,10;UBERON:0002240,1.70e-09,6;UBERON:0005174,1.70e-09,6;UBERON:0001137,1.70e-09,6;UBERON:0002619,1.17e-08,17;UBERON:0001948,3.29e-08,5;UBERON:0002315,3.29e-08,5;UBERON:0000956,9.29e-08,21;UBERON:0001869,9.29e-08,21;UBERON:0000203,9.29e-08,21;UBERON:0002950,1.59e-07,4;UBERON:0001891,1.59e-07,4;UBERON:0009616,1.59e-07,4;UBERON:0010286,1.59e-07,4;UBERON:0000369,1.63e-07,5;UBERON:0002435,1.63e-07,5;UBERON:0000204,1.63e-07,5;UBERON:0010082,1.63e-07,5;UBERON:0000483,8.02e-07,174
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0.140788722151667,0,0.171217968225505,0,0,0,0,0.202475267389826,0,0,0.274228867211478,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,4.45096213891115,7.40587370980846,3.1691570175309,0,0,0,0,0,0,0.768436610643109,0.207379224616955,0.405017814995072,0,8.56952953211411,8.83474163806454,0.489963196859816,0.766763768145891,0.919218786610021,11.0115880999389,13.5348578370299,15.5142598588806,6.4624280987795,5.85520919055422,4.16730696445408,15.0758819460746,11.8180148106653,14.0574387954665,10.9012576625257,10.5355043791336,6.52398060388552,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,12.5895742714965,12.9856958224342,0.255457055208591,0,0,0,13.3313669070292,8.23501085073528,2.76439574648302,2.25971616249959,2.81287003063364,10.5971902725376,8.59878694259116,0,0,0,1.05220927943237,0.130120442962704,0,0.360124259610698,0.60281927134286,0.884474488967262,1.2811372028485,1.49922759295566,4.9153640440413,0,0.378212160335639,0.527853372491847,0.657587197282725,0.278047249225598,0.696504333044333,0,0.199034266818493,0,0,0,2.27838349789052,1.64168241986767,2.70093092191522,0.23674473558521,1.37734962223183,1.54267112887378,0.232533944750408,0.804820204198858,0.350296027101508,0.329119699826961,0.164167464079095,0.324275238183423,0.438599962275997,0.439100230582101,0.268412837520744,2.10289948564127,1.64647379806855,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0.397912944082302,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.280543279561274,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,9.79358598925531,10.6662634798905,0,0,0,0,0,0,0,0,0,0.292255857911312,0,4.4984984299053,0,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0.36012218806262,0.129358683782755,0.643011105094777,0.354680467284547,1.78368817602071,1.64549020602121,1.2178597964584,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,8.52956389248344,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.496375471371293,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.680191150845634,0,0.0897138566094757,0,0,0,0,0,0,1.6942555278512,1.38097570952153,3.43737308063638,3.26521046453006,4.11049511862385,3.7769694869485,1.35004500046361,1.80128481289688,2.26571204492102,2.07104124700728,0.207574695168353,0.798049746802062,0.682934423016537,0.729320151204882,0.209613162627982,0.919217542250071,0.44449345560323,1.03017528619447,0,1.01078884705519,1.2673964994512,0.565879024158229,1.03005658216871,1.08842759088278,0.861532034334199,0.952587382566147,1.15884325944855,0.964546102318525,0.824171801606613,0.588795680537589,0.342869252385415,0.887379030796687,1.90748951957857,0.581385666529314,0.658765662907314,1.01537529470012,0.73171189149109,0.789209134313529,1.08643291076689,0,0.711810108745045,0.492522411877817,0.409231043169689,0.619747364743864,1.15743966588685,1.49886346762768,0.701794825336225,0.214871054048298,0.57386499620653,0.220591419119515,0
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0.140788722151667,0,0.171217968225505,0,0,0,0,0.202475267389826,0,0,0.274228867211478,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,4.45096213891115,7.40587370980846,3.1691570175309,0,0,0,0,0,0,0.768436610643109,0.207379224616955,0.405017814995072,0,8.56952953211411,8.83474163806454,0.489963196859816,0.766763768145891,0.919218786610021,11.0115880999389,13.5348578370299,15.5142598588806,6.4624280987795,5.85520919055422,4.16730696445408,15.0758819460746,11.8180148106653,14.0574387954665,10.9012576625257,10.5355043791336,6.52398060388552,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,12.5895742714965,12.9856958224342,0.255457055208591,0,0,0,13.3313669070292,8.23501085073528,2.76439574648302,2.25971616249959,2.81287003063364,10.5971902725376,8.59878694259116,0,0,0,1.05220927943237,0.130120442962704,0,0.360124259610698,0.60281927134286,0.884474488967262,1.2811372028485,1.49922759295566,4.9153640440413,0,0.378212160335639,0.527853372491847,0.657587197282725,0.278047249225598,0.696504333044333,0,0.199034266818493,0,0,0,2.27838349789052,1.64168241986767,2.70093092191522,0.23674473558521,1.37734962223183,1.54267112887378,0.232533944750408,0.804820204198858,0.350296027101508,0.329119699826961,0.164167464079095,0.324275238183423,0.438599962275997,0.439100230582101,0.268412837520744,2.10289948564127,1.64647379806855,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0.397912944082302,0,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0.280543279561274,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,9.79358598925531,10.6662634798905,0,0,0,0,0,0,0,0,0,0.292255857911312,0,4.4984984299053,0,0.35613120733451,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,2.04263763452273,0.36012218806262,0.129358683782755,0.643011105094777,0.354680467284547,1.78368817602071,1.64549020602121,1.2178597964584,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,8.52956389248344,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.496375471371293,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.680191150845634,0,0.0897138566094757,0,0,0,0,0,0,1.6942555278512,1.38097570952153,3.43737308063638,3.26521046453006,4.11049511862385,3.7769694869485,1.35004500046361,1.80128481289688,2.26571204492102,2.07104124700728,0.207574695168353,0.798049746802062,0.682934423016537,0.729320151204882,0.209613162627982,0.919217542250071,0.44449345560323,1.03017528619447,0,1.01078884705519,1.2673964994512,0.565879024158229,1.03005658216871,1.08842759088278,0.861532034334199,0.952587382566147,1.15884325944855,0.964546102318525,0.824171801606613,0.588795680537589,0.342869252385415,0.887379030796687,1.90748951957857,0.581385666529314,0.658765662907314,1.01537529470012,0.73171189149109,0.789209134313529,1.08643291076689,0,0.711810108745045,0.492522411877817,0.409231043169689,0.619747364743864,1.15743966588685,1.49886346762768,0.701794825336225,0.214871054048298,0.57386499620653,0.220591419119515,0
|short_description=p2@Cacna2d2
}}
}}

Latest revision as of 03:22, 26 September 2015

Short description:p2@Cacna2d2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cacna2d2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -4bp_to_ENSMUST00000166799, ENSMUST00000170737_5end
EntrezGene:Cacna2d2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cacna2d2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.52
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B212.59
cerebellum, neonate N30.CNhs11135.1395-42I212.99
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A413.33
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B28.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C29.79
medulla oblongata, neonate N30.CNhs11200.1396-42A310.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.53
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.24e-1623
neuroblast (sensu Vertebrata)1.24e-1623
neuron3.16e-1133
neuronal stem cell3.16e-1133
neuroblast3.16e-1133
electrically signaling cell3.16e-1133
electrically responsive cell1.09e-0839
electrically active cell1.09e-0839
neural cell2.07e-0743
ectodermal cell3.94e-0744
neurectodermal cell3.94e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.47e-3554
central nervous system6.63e-3373
neural tube3.04e-3252
neural rod3.04e-3252
future spinal cord3.04e-3252
neural keel3.04e-3252
nervous system1.15e-3175
neurectoderm3.48e-3064
neural plate3.48e-3064
presumptive neural plate3.48e-3064
ectoderm-derived structure3.14e-2795
ectoderm3.14e-2795
presumptive ectoderm3.14e-2795
ecto-epithelium2.39e-2673
brain1.25e-2547
future brain1.25e-2547
regional part of brain1.84e-2446
structure with developmental contribution from neural crest2.19e-2492
gray matter1.05e-2234
pre-chordal neural plate5.31e-2149
anterior neural tube8.55e-2140
regional part of forebrain1.69e-1939
forebrain1.69e-1939
future forebrain1.69e-1939
brain grey matter1.80e-1629
regional part of telencephalon1.80e-1629
telencephalon1.80e-1629
tube1.45e-12114
posterior neural tube3.73e-1212
chordal neural plate3.73e-1212
basal ganglion5.88e-128
nuclear complex of neuraxis5.88e-128
aggregate regional part of brain5.88e-128
collection of basal ganglia5.88e-128
cerebral subcortex5.88e-128
anatomical conduit9.77e-12122
occipital lobe1.44e-1110
visual cortex1.44e-1110
neocortex1.44e-1110
spinal cord1.70e-096
dorsal region element1.70e-096
dorsum1.70e-096
regional part of cerebral cortex1.17e-0817
regional part of spinal cord3.29e-085
gray matter of spinal cord3.29e-085
cerebral cortex9.29e-0821
cerebral hemisphere9.29e-0821
pallium9.29e-0821
regional part of midbrain1.59e-074
midbrain1.59e-074
presumptive midbrain1.59e-074
midbrain neural tube1.59e-074
corpus striatum1.63e-075
striatum1.63e-075
ventral part of telencephalon1.63e-075
future corpus striatum1.63e-075
epithelium8.02e-07174
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