FFCP PHASE1:Mm9::chr5:9725277..9725297,-: Difference between revisions
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{{FFCP|EntrezGene=108069|HGNC=|MCL_coexpression_id=1|UniProt=Q9QYS2|association_with_transcript=54bp_to_ENSMUST00000004076,NM_181850,uc008wll.1_5end|description=CAGE_peak_6_at_Grm3_5end|id=chr5:9725277..9725297,-|ontology_enrichment_celltype=CL:0000117!1.09e-14!23;CL:0000337!1.09e-14!23;CL:0000540!2.67e-09!33;CL:0000047!2.67e-09!33;CL:0000031!2.67e-09!33;CL:0000404!2.67e-09!33;CL:0000393!5.70e-07!39;CL:0000211!5.70e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.58e-09,23;CL:0000337,5.58e-09,23;CL:0002610,1.80e-08,3;CL:0002614,3.23e-08,3;CL:0002612,1.33e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.27e-25!52;UBERON:0005068!5.27e-25!52;UBERON:0006241!5.27e-25!52;UBERON:0007135!5.27e-25!52;UBERON:0001017!6.80e-24!73;UBERON:0005743!6.80e-24!73;UBERON:0002020!1.26e-23!34;UBERON:0000955!1.81e-23!50;UBERON:0006238!1.81e-23!50;UBERON:0000073!7.65e-23!75;UBERON:0001016!7.65e-23!75;UBERON:0002616!1.56e-22!49;UBERON:0000033!1.85e-22!63;UBERON:0002346!7.63e-22!71;UBERON:0003075!7.63e-22!71;UBERON:0007284!7.63e-22!71;UBERON:0004121!2.30e-19!102;UBERON:0000924!2.30e-19!102;UBERON:0006601!2.30e-19!102;UBERON:0002791!5.89e-19!29;UBERON:0003528!5.89e-19!29;UBERON:0001893!5.89e-19!29;UBERON:0003056!2.62e-17!49;UBERON:0003080!5.04e-17!40;UBERON:0002780!4.57e-16!39;UBERON:0001890!4.57e-16!39;UBERON:0006240!4.57e-16!39;UBERON:0000956!1.81e-13!21;UBERON:0001869!1.81e-13!21;UBERON:0000203!1.81e-13!21;UBERON:0002021!4.28e-13!10;UBERON:0000411!4.28e-13!10;UBERON:0001950!4.28e-13!10;UBERON:0007811!7.71e-13!86;UBERON:0002619!9.30e-11!17;UBERON:0000153!1.14e-10!94;UBERON:0003076!1.03e-08!12;UBERON:0003057!1.03e-08!12;UBERON:0002298!1.06e-07!6;UBERON:0002240!5.99e-07!6;UBERON:0005174!5.99e-07!6;UBERON:0001137!5.99e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.89e-44,54;UBERON:0001049,8.90e-40,52;UBERON:0005068,8.90e-40,52;UBERON:0006241,8.90e-40,52;UBERON:0007135,8.90e-40,52;UBERON:0001017,1.56e-35,73;UBERON:0001016,2.04e-34,75;UBERON:0000955,4.55e-33,47;UBERON:0006238,4.55e-33,47;UBERON:0002020,6.37e-33,34;UBERON:0002616,2.96e-31,46;UBERON:0002346,3.59e-31,64;UBERON:0003075,3.59e-31,64;UBERON:0007284,3.59e-31,64;UBERON:0002021,9.13e-27,10;UBERON:0000411,9.13e-27,10;UBERON:0001950,9.13e-27,10;UBERON:0010371,1.44e-26,73;UBERON:0003528,2.05e-26,29;UBERON:0002791,2.05e-26,29;UBERON:0001893,2.05e-26,29;UBERON:0004121,7.97e-26,95;UBERON:0000924,7.97e-26,95;UBERON:0006601,7.97e-26,95;UBERON:0003080,2.98e-25,40;UBERON:0002780,2.14e-23,39;UBERON:0001890,2.14e-23,39;UBERON:0006240,2.14e-23,39;UBERON:0002619,2.23e-21,17;UBERON:0000956,5.46e-20,21;UBERON:0001869,5.46e-20,21;UBERON:0000203,5.46e-20,21;UBERON:0010314,8.45e-20,92;UBERON:0003056,1.01e-19,49;UBERON:0003076,4.60e-15,12;UBERON:0003057,4.60e-15,12;UBERON:0000025,9.05e-15,114;UBERON:0004111,2.18e-13,122;UBERON:0002950,1.68e-10,4;UBERON:0001891,1.68e-10,4;UBERON:0009616,1.68e-10,4;UBERON:0010286,1.68e-10,4;UBERON:0002240,1.07e-09,6;UBERON:0005174,1.07e-09,6;UBERON:0001137,1.07e-09,6;UBERON:0011216,2.87e-09,194;UBERON:0004684,1.80e-08,3;UBERON:0002275,1.80e-08,3;UBERON:0002038,3.23e-08,3;UBERON:0009663,3.23e-08,3;UBERON:0009661,3.23e-08,3;UBERON:0000125,3.23e-08,3;UBERON:0002308,3.23e-08,3;UBERON:0001948,1.17e-07,5;UBERON:0002315,1.17e-07,5;UBERON:0002257,1.33e-07,3;UBERON:0002420,1.68e-07,8;UBERON:0007245,1.68e-07,8;UBERON:0010009,1.68e-07,8;UBERON:0010011,1.68e-07,8;UBERON:0000454,1.68e-07,8;UBERON:0000483,1.73e-07,174;UBERON:0000119,2.48e-07,176;UBERON:0004733,5.20e-07,6;UBERON:0004732,5.20e-07,6;UBERON:0002028,5.20e-07,6;UBERON:0007277,5.20e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,1.98781686856452,0,0.0958454710182364,0,1.10115880999389,4.85211884723713,5.83704826373725,0.923204014111357,0.365950574409639,0,2.79182999001381,3.37657566019008,3.97275444219706,2.35702868378934,2.84743361598206,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.04946557908083,5.02672096352292,0,0,0,0,3.89455662452539,2.74500361691176,1.25654352112864,6.08385120672968,5.8814555185976,5.61027720310812,2.92034273521964,0,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,3.08713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21101179975584,3.7507739709505,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,6.90487854760765,5.72895513439397,6.8741272937475,4.7955776383945,3.0215755895588,5.40018000185445,4.05289082901798,5.89085131679466,4.65984280576638,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.505394423527595,0.50695859978048,0.377252682772152,0.468207537349412,0.320125762024346,0.631790158511746,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0.532427418478012,0.715308569841963,0.145346416632329,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.679020569229309,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0|short_description=p6@Grm3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108069 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QYS2 | |||
|association_with_transcript=54bp_to_ENSMUST00000004076,NM_181850,uc008wll.1_5end | |||
|cluster_id=chr5:9725277..9725297,- | |||
|description=CAGE_peak_6_at_Grm3_5end | |||
|id=chr5:9725277..9725297,- | |||
|ontology_enrichment_celltype=CL:0000117!1.09e-14!23;CL:0000337!1.09e-14!23;CL:0000540!2.67e-09!33;CL:0000047!2.67e-09!33;CL:0000031!2.67e-09!33;CL:0000404!2.67e-09!33;CL:0000393!5.70e-07!39;CL:0000211!5.70e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.58e-09,23;CL:0000337,5.58e-09,23;CL:0002610,1.80e-08,3;CL:0002614,3.23e-08,3;CL:0002612,1.33e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.27e-25!52;UBERON:0005068!5.27e-25!52;UBERON:0006241!5.27e-25!52;UBERON:0007135!5.27e-25!52;UBERON:0001017!6.80e-24!73;UBERON:0005743!6.80e-24!73;UBERON:0002020!1.26e-23!34;UBERON:0000955!1.81e-23!50;UBERON:0006238!1.81e-23!50;UBERON:0000073!7.65e-23!75;UBERON:0001016!7.65e-23!75;UBERON:0002616!1.56e-22!49;UBERON:0000033!1.85e-22!63;UBERON:0002346!7.63e-22!71;UBERON:0003075!7.63e-22!71;UBERON:0007284!7.63e-22!71;UBERON:0004121!2.30e-19!102;UBERON:0000924!2.30e-19!102;UBERON:0006601!2.30e-19!102;UBERON:0002791!5.89e-19!29;UBERON:0003528!5.89e-19!29;UBERON:0001893!5.89e-19!29;UBERON:0003056!2.62e-17!49;UBERON:0003080!5.04e-17!40;UBERON:0002780!4.57e-16!39;UBERON:0001890!4.57e-16!39;UBERON:0006240!4.57e-16!39;UBERON:0000956!1.81e-13!21;UBERON:0001869!1.81e-13!21;UBERON:0000203!1.81e-13!21;UBERON:0002021!4.28e-13!10;UBERON:0000411!4.28e-13!10;UBERON:0001950!4.28e-13!10;UBERON:0007811!7.71e-13!86;UBERON:0002619!9.30e-11!17;UBERON:0000153!1.14e-10!94;UBERON:0003076!1.03e-08!12;UBERON:0003057!1.03e-08!12;UBERON:0002298!1.06e-07!6;UBERON:0002240!5.99e-07!6;UBERON:0005174!5.99e-07!6;UBERON:0001137!5.99e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.89e-44,54;UBERON:0001049,8.90e-40,52;UBERON:0005068,8.90e-40,52;UBERON:0006241,8.90e-40,52;UBERON:0007135,8.90e-40,52;UBERON:0001017,1.56e-35,73;UBERON:0001016,2.04e-34,75;UBERON:0000955,4.55e-33,47;UBERON:0006238,4.55e-33,47;UBERON:0002020,6.37e-33,34;UBERON:0002616,2.96e-31,46;UBERON:0002346,3.59e-31,64;UBERON:0003075,3.59e-31,64;UBERON:0007284,3.59e-31,64;UBERON:0002021,9.13e-27,10;UBERON:0000411,9.13e-27,10;UBERON:0001950,9.13e-27,10;UBERON:0010371,1.44e-26,73;UBERON:0003528,2.05e-26,29;UBERON:0002791,2.05e-26,29;UBERON:0001893,2.05e-26,29;UBERON:0004121,7.97e-26,95;UBERON:0000924,7.97e-26,95;UBERON:0006601,7.97e-26,95;UBERON:0003080,2.98e-25,40;UBERON:0002780,2.14e-23,39;UBERON:0001890,2.14e-23,39;UBERON:0006240,2.14e-23,39;UBERON:0002619,2.23e-21,17;UBERON:0000956,5.46e-20,21;UBERON:0001869,5.46e-20,21;UBERON:0000203,5.46e-20,21;UBERON:0010314,8.45e-20,92;UBERON:0003056,1.01e-19,49;UBERON:0003076,4.60e-15,12;UBERON:0003057,4.60e-15,12;UBERON:0000025,9.05e-15,114;UBERON:0004111,2.18e-13,122;UBERON:0002950,1.68e-10,4;UBERON:0001891,1.68e-10,4;UBERON:0009616,1.68e-10,4;UBERON:0010286,1.68e-10,4;UBERON:0002240,1.07e-09,6;UBERON:0005174,1.07e-09,6;UBERON:0001137,1.07e-09,6;UBERON:0011216,2.87e-09,194;UBERON:0004684,1.80e-08,3;UBERON:0002275,1.80e-08,3;UBERON:0002038,3.23e-08,3;UBERON:0009663,3.23e-08,3;UBERON:0009661,3.23e-08,3;UBERON:0000125,3.23e-08,3;UBERON:0002308,3.23e-08,3;UBERON:0001948,1.17e-07,5;UBERON:0002315,1.17e-07,5;UBERON:0002257,1.33e-07,3;UBERON:0002420,1.68e-07,8;UBERON:0007245,1.68e-07,8;UBERON:0010009,1.68e-07,8;UBERON:0010011,1.68e-07,8;UBERON:0000454,1.68e-07,8;UBERON:0000483,1.73e-07,174;UBERON:0000119,2.48e-07,176;UBERON:0004733,5.20e-07,6;UBERON:0004732,5.20e-07,6;UBERON:0002028,5.20e-07,6;UBERON:0007277,5.20e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,1.98781686856452,0,0.0958454710182364,0,1.10115880999389,4.85211884723713,5.83704826373725,0.923204014111357,0.365950574409639,0,2.79182999001381,3.37657566019008,3.97275444219706,2.35702868378934,2.84743361598206,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.04946557908083,5.02672096352292,0,0,0,0,3.89455662452539,2.74500361691176,1.25654352112864,6.08385120672968,5.8814555185976,5.61027720310812,2.92034273521964,0,0,0,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,3.08713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21101179975584,3.7507739709505,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21227026878773,6.90487854760765,5.72895513439397,6.8741272937475,4.7955776383945,3.0215755895588,5.40018000185445,4.05289082901798,5.89085131679466,4.65984280576638,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.505394423527595,0.50695859978048,0.377252682772152,0.468207537349412,0.320125762024346,0.631790158511746,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0.532427418478012,0.715308569841963,0.145346416632329,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.679020569229309,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p6@Grm3 | |||
}} |
Latest revision as of 09:51, 26 September 2015
Short description: | p6@Grm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Grm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 54bp_to_ENSMUST00000004076, NM_181850, uc008wll.1_5end |
EntrezGene: | Grm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.58e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.58e-09 | 23 |
raphe nuclei neuron | 1.80e-08 | 3 |
neuron of the substantia nigra | 3.23e-08 | 3 |
neuron of the ventral spinal cord | 1.33e-07 | 3 |