FFCP PHASE1:Mm9::chr18:35374634..35374646,-: Difference between revisions
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{{FFCP|EntrezGene=107065|HGNC=|MCL_coexpression_id=2|UniProt=Q8BGA3,Q8C8L1|association_with_transcript=31bp_to_ENSMUST00000091636,NM_178005,uc008ema.1_5end|description=CAGE_peak_3_at_Lrrtm2_5end|id=chr18:35374634..35374646,-|ontology_enrichment_celltype=CL:0000117!2.61e-12!23;CL:0000337!2.61e-12!23;CL:0000540!5.45e-12!33;CL:0000047!5.45e-12!33;CL:0000031!5.45e-12!33;CL:0000404!5.45e-12!33;CL:0000221!2.62e-10!44;CL:0000133!2.62e-10!44;CL:0002319!8.49e-10!43;CL:0000393!9.74e-09!39;CL:0000211!9.74e-09!39;CL:0000055!4.21e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.25e-14,23;CL:0000337,8.25e-14,23;CL:0000540,6.18e-10,33;CL:0000047,6.18e-10,33;CL:0000031,6.18e-10,33;CL:0000404,6.18e-10,33;CL:0002319,4.86e-09,43;CL:0000221,9.68e-09,44;CL:0000133,9.68e-09,44;CL:0000393,7.47e-08,39;CL:0000211,7.47e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.70e-30!63;UBERON:0000073!2.24e-30!75;UBERON:0001016!2.24e-30!75;UBERON:0001017!1.05e-28!73;UBERON:0005743!1.05e-28!73;UBERON:0002346!1.62e-28!71;UBERON:0003075!1.62e-28!71;UBERON:0007284!1.62e-28!71;UBERON:0001049!3.21e-28!52;UBERON:0005068!3.21e-28!52;UBERON:0006241!3.21e-28!52;UBERON:0007135!3.21e-28!52;UBERON:0000955!2.34e-27!50;UBERON:0006238!2.34e-27!50;UBERON:0004121!1.23e-26!102;UBERON:0000924!1.23e-26!102;UBERON:0006601!1.23e-26!102;UBERON:0002616!1.79e-26!49;UBERON:0003056!5.96e-26!49;UBERON:0002020!3.28e-23!34;UBERON:0003080!1.63e-22!40;UBERON:0002780!1.22e-21!39;UBERON:0001890!1.22e-21!39;UBERON:0006240!1.22e-21!39;UBERON:0002791!7.36e-20!29;UBERON:0003528!7.36e-20!29;UBERON:0001893!7.36e-20!29;UBERON:0007811!7.57e-19!86;UBERON:0000153!1.67e-15!94;UBERON:0000956!8.01e-14!21;UBERON:0001869!8.01e-14!21;UBERON:0000203!8.01e-14!21;UBERON:0002619!1.18e-11!17;UBERON:0002021!5.34e-11!10;UBERON:0000411!5.34e-11!10;UBERON:0001950!5.34e-11!10;UBERON:0002420!2.98e-07!8;UBERON:0007245!2.98e-07!8;UBERON:0010009!2.98e-07!8;UBERON:0010011!2.98e-07!8;UBERON:0000454!2.98e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.62e-44,54;UBERON:0001049,1.14e-40,52;UBERON:0005068,1.14e-40,52;UBERON:0006241,1.14e-40,52;UBERON:0007135,1.14e-40,52;UBERON:0001016,2.77e-39,75;UBERON:0002346,1.88e-37,64;UBERON:0003075,1.88e-37,64;UBERON:0007284,1.88e-37,64;UBERON:0001017,2.46e-36,73;UBERON:0000955,5.05e-36,47;UBERON:0006238,5.05e-36,47;UBERON:0002020,7.74e-36,34;UBERON:0002616,2.16e-34,46;UBERON:0004121,5.95e-34,95;UBERON:0000924,5.95e-34,95;UBERON:0006601,5.95e-34,95;UBERON:0010371,1.13e-31,73;UBERON:0003528,1.48e-31,29;UBERON:0002791,1.48e-31,29;UBERON:0001893,1.48e-31,29;UBERON:0003080,2.18e-30,40;UBERON:0003056,2.19e-29,49;UBERON:0002780,9.10e-29,39;UBERON:0001890,9.10e-29,39;UBERON:0006240,9.10e-29,39;UBERON:0010314,3.47e-23,92;UBERON:0000956,7.64e-22,21;UBERON:0001869,7.64e-22,21;UBERON:0000203,7.64e-22,21;UBERON:0002021,5.07e-21,10;UBERON:0000411,5.07e-21,10;UBERON:0001950,5.07e-21,10;UBERON:0002619,8.46e-19,17;UBERON:0000025,1.12e-13,114;UBERON:0004111,3.33e-12,122;UBERON:0002420,1.16e-10,8;UBERON:0007245,1.16e-10,8;UBERON:0010009,1.16e-10,8;UBERON:0010011,1.16e-10,8;UBERON:0000454,1.16e-10,8;UBERON:0003076,3.70e-10,12;UBERON:0003057,3.70e-10,12;UBERON:0011216,4.64e-09,194;UBERON:0002950,4.48e-08,4;UBERON:0001891,4.48e-08,4;UBERON:0009616,4.48e-08,4;UBERON:0010286,4.48e-08,4;UBERON:0000483,7.35e-08,174;UBERON:0000119,1.15e-07,176;UBERON:0002240,6.80e-07,6;UBERON:0005174,6.80e-07,6;UBERON:0001137,6.80e-07,6|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0.384218305321555,1.03689612308478,0.135005938331691,1.47227472945967,1.14260393761521,0.883474163806454,1.71487118900936,0.575072826109418,0.919218786610021,3.30347642998166,9.57655035638908,10.752457327937,0.791317726381163,1.09785172322892,1.56274011167028,3.35019598801657,3.93933827022176,5.19514042441154,1.17851434189467,3.13217697758026,1.1183966749518,1.59025005999687,4.23200736597999,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,2.92780797011547,1.25668024088073,0,0.11981512450592,0,0,6.29120685500255,14.1825186873774,3.5183218591602,12.1677024134594,9.97290283588289,12.8828587626927,8.92326946872667,0,0,0,0.420883711772948,0.260240885925407,0,0.720248519221397,0.60281927134286,1.2246569847239,1.5373646434182,0.562210347358373,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57043814830858,3.19004298375782,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0.58489226135736,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,3.85321415970701,2.69586879162067,0,0,0.315508219416257,0,0.646270193198397,0,0.445597348164788,1.98153571552183,0,0,0.790575555893047,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0.36012218806262,0,0,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,4.63563255026274,0,0,0.185194527369712,0,0,0,0.849892149969277,0.559805809294632,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3310663342144,14.2700823317225,19.4784474569395,12.7171354934329,11.6464028361009,14.3524840504043,19.5756525067224,18.463169332193,14.9536994964788,12.9440077937955,0.103787347584177,0.399024873401031,0,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.842773567228942,0.832326981263301,0.746661096422973,0,0.579421629724277,0.192909220463705,0.412085900803307,0.735994600671987,1.37147700954166,0.532427418478012,0.476872379894642,0.872078499793971,0.282328141245992,0.761531471025089,0,0.263069711437843,0.950628796921032,0,0.355905054372522,0.197008964751127,0.409231043169689,0.77468420592983,0.578719832943424,0.749431733813838,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p3@Lrrtm2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107065 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGA3,Q8C8L1 | |||
|association_with_transcript=31bp_to_ENSMUST00000091636,NM_178005,uc008ema.1_5end | |||
|cluster_id=chr18:35374634..35374646,- | |||
|description=CAGE_peak_3_at_Lrrtm2_5end | |||
|id=chr18:35374634..35374646,- | |||
|ontology_enrichment_celltype=CL:0000117!2.61e-12!23;CL:0000337!2.61e-12!23;CL:0000540!5.45e-12!33;CL:0000047!5.45e-12!33;CL:0000031!5.45e-12!33;CL:0000404!5.45e-12!33;CL:0000221!2.62e-10!44;CL:0000133!2.62e-10!44;CL:0002319!8.49e-10!43;CL:0000393!9.74e-09!39;CL:0000211!9.74e-09!39;CL:0000055!4.21e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.25e-14,23;CL:0000337,8.25e-14,23;CL:0000540,6.18e-10,33;CL:0000047,6.18e-10,33;CL:0000031,6.18e-10,33;CL:0000404,6.18e-10,33;CL:0002319,4.86e-09,43;CL:0000221,9.68e-09,44;CL:0000133,9.68e-09,44;CL:0000393,7.47e-08,39;CL:0000211,7.47e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.70e-30!63;UBERON:0000073!2.24e-30!75;UBERON:0001016!2.24e-30!75;UBERON:0001017!1.05e-28!73;UBERON:0005743!1.05e-28!73;UBERON:0002346!1.62e-28!71;UBERON:0003075!1.62e-28!71;UBERON:0007284!1.62e-28!71;UBERON:0001049!3.21e-28!52;UBERON:0005068!3.21e-28!52;UBERON:0006241!3.21e-28!52;UBERON:0007135!3.21e-28!52;UBERON:0000955!2.34e-27!50;UBERON:0006238!2.34e-27!50;UBERON:0004121!1.23e-26!102;UBERON:0000924!1.23e-26!102;UBERON:0006601!1.23e-26!102;UBERON:0002616!1.79e-26!49;UBERON:0003056!5.96e-26!49;UBERON:0002020!3.28e-23!34;UBERON:0003080!1.63e-22!40;UBERON:0002780!1.22e-21!39;UBERON:0001890!1.22e-21!39;UBERON:0006240!1.22e-21!39;UBERON:0002791!7.36e-20!29;UBERON:0003528!7.36e-20!29;UBERON:0001893!7.36e-20!29;UBERON:0007811!7.57e-19!86;UBERON:0000153!1.67e-15!94;UBERON:0000956!8.01e-14!21;UBERON:0001869!8.01e-14!21;UBERON:0000203!8.01e-14!21;UBERON:0002619!1.18e-11!17;UBERON:0002021!5.34e-11!10;UBERON:0000411!5.34e-11!10;UBERON:0001950!5.34e-11!10;UBERON:0002420!2.98e-07!8;UBERON:0007245!2.98e-07!8;UBERON:0010009!2.98e-07!8;UBERON:0010011!2.98e-07!8;UBERON:0000454!2.98e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.62e-44,54;UBERON:0001049,1.14e-40,52;UBERON:0005068,1.14e-40,52;UBERON:0006241,1.14e-40,52;UBERON:0007135,1.14e-40,52;UBERON:0001016,2.77e-39,75;UBERON:0002346,1.88e-37,64;UBERON:0003075,1.88e-37,64;UBERON:0007284,1.88e-37,64;UBERON:0001017,2.46e-36,73;UBERON:0000955,5.05e-36,47;UBERON:0006238,5.05e-36,47;UBERON:0002020,7.74e-36,34;UBERON:0002616,2.16e-34,46;UBERON:0004121,5.95e-34,95;UBERON:0000924,5.95e-34,95;UBERON:0006601,5.95e-34,95;UBERON:0010371,1.13e-31,73;UBERON:0003528,1.48e-31,29;UBERON:0002791,1.48e-31,29;UBERON:0001893,1.48e-31,29;UBERON:0003080,2.18e-30,40;UBERON:0003056,2.19e-29,49;UBERON:0002780,9.10e-29,39;UBERON:0001890,9.10e-29,39;UBERON:0006240,9.10e-29,39;UBERON:0010314,3.47e-23,92;UBERON:0000956,7.64e-22,21;UBERON:0001869,7.64e-22,21;UBERON:0000203,7.64e-22,21;UBERON:0002021,5.07e-21,10;UBERON:0000411,5.07e-21,10;UBERON:0001950,5.07e-21,10;UBERON:0002619,8.46e-19,17;UBERON:0000025,1.12e-13,114;UBERON:0004111,3.33e-12,122;UBERON:0002420,1.16e-10,8;UBERON:0007245,1.16e-10,8;UBERON:0010009,1.16e-10,8;UBERON:0010011,1.16e-10,8;UBERON:0000454,1.16e-10,8;UBERON:0003076,3.70e-10,12;UBERON:0003057,3.70e-10,12;UBERON:0011216,4.64e-09,194;UBERON:0002950,4.48e-08,4;UBERON:0001891,4.48e-08,4;UBERON:0009616,4.48e-08,4;UBERON:0010286,4.48e-08,4;UBERON:0000483,7.35e-08,174;UBERON:0000119,1.15e-07,176;UBERON:0002240,6.80e-07,6;UBERON:0005174,6.80e-07,6;UBERON:0001137,6.80e-07,6 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0.384218305321555,1.03689612308478,0.135005938331691,1.47227472945967,1.14260393761521,0.883474163806454,1.71487118900936,0.575072826109418,0.919218786610021,3.30347642998166,9.57655035638908,10.752457327937,0.791317726381163,1.09785172322892,1.56274011167028,3.35019598801657,3.93933827022176,5.19514042441154,1.17851434189467,3.13217697758026,1.1183966749518,1.59025005999687,4.23200736597999,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,2.92780797011547,1.25668024088073,0,0.11981512450592,0,0,6.29120685500255,14.1825186873774,3.5183218591602,12.1677024134594,9.97290283588289,12.8828587626927,8.92326946872667,0,0,0,0.420883711772948,0.260240885925407,0,0.720248519221397,0.60281927134286,1.2246569847239,1.5373646434182,0.562210347358373,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57043814830858,3.19004298375782,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0.58489226135736,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,3.85321415970701,2.69586879162067,0,0,0.315508219416257,0,0.646270193198397,0,0.445597348164788,1.98153571552183,0,0,0.790575555893047,4.4984984299053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0.36012218806262,0,0,0.177340233642274,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,4.63563255026274,0,0,0.185194527369712,0,0,0,0.849892149969277,0.559805809294632,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3310663342144,14.2700823317225,19.4784474569395,12.7171354934329,11.6464028361009,14.3524840504043,19.5756525067224,18.463169332193,14.9536994964788,12.9440077937955,0.103787347584177,0.399024873401031,0,0.729320151204882,0.209613162627982,0.367687016900028,0.666740183404846,0,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.842773567228942,0.832326981263301,0.746661096422973,0,0.579421629724277,0.192909220463705,0.412085900803307,0.735994600671987,1.37147700954166,0.532427418478012,0.476872379894642,0.872078499793971,0.282328141245992,0.761531471025089,0,0.263069711437843,0.950628796921032,0,0.355905054372522,0.197008964751127,0.409231043169689,0.77468420592983,0.578719832943424,0.749431733813838,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p3@Lrrtm2 | |||
}} |
Latest revision as of 04:40, 27 September 2015
Short description: | p3@Lrrtm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lrrtm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 31bp_to_ENSMUST00000091636, NM_178005, uc008ema.1_5end |
EntrezGene: | Lrrtm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.25e-14 | 23 |
neuroblast (sensu Vertebrata) | 8.25e-14 | 23 |
neuron | 6.18e-10 | 33 |
neuronal stem cell | 6.18e-10 | 33 |
neuroblast | 6.18e-10 | 33 |
electrically signaling cell | 6.18e-10 | 33 |
neural cell | 4.86e-09 | 43 |
ectodermal cell | 9.68e-09 | 44 |
neurectodermal cell | 9.68e-09 | 44 |
electrically responsive cell | 7.47e-08 | 39 |
electrically active cell | 7.47e-08 | 39 |