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FFCP PHASE1:Mm9::chr3:158225163..158225254,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:158225163..158225254,-
|DHSsupport=NA
|short_description=p3@Lrrc7
|DPIdataset=NA
|description=CAGE_peak_3_at_Lrrc7_5end
|association_with_transcript=0bp_to_ENSMUST00000106044,NM_001081358,uc008rvw.1,uc008rvx.1,uc012dac.1_5end
|EntrezGene=242274
|EntrezGene=242274
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=E9Q6L9,Q80TE7,B9EHV0
|UniProt=E9Q6L9,Q80TE7,B9EHV0
|association_with_transcript=0bp_to_ENSMUST00000106044,NM_001081358,uc008rvw.1,uc008rvx.1,uc012dac.1_5end
|cluster_id=chr3:158225163..158225254,-
|description=CAGE_peak_3_at_Lrrc7_5end
|id=chr3:158225163..158225254,-
|ontology_enrichment_celltype=CL:0000117!2.33e-17!23;CL:0000337!2.33e-17!23;CL:0000540!5.72e-13!33;CL:0000047!5.72e-13!33;CL:0000031!5.72e-13!33;CL:0000404!5.72e-13!33;CL:0000393!1.77e-09!39;CL:0000211!1.77e-09!39;CL:0000221!6.37e-08!44;CL:0000133!6.37e-08!44;CL:0002319!9.33e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,4.01e-29,23;CL:0000337,4.01e-29,23;CL:0000540,1.73e-18,33;CL:0000047,1.73e-18,33;CL:0000031,1.73e-18,33;CL:0000404,1.73e-18,33;CL:0000393,9.46e-15,39;CL:0000211,9.46e-15,39;CL:0002319,7.53e-13,43;CL:0000221,1.98e-12,44;CL:0000133,1.98e-12,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.35e-24!52;UBERON:0005068!1.35e-24!52;UBERON:0006241!1.35e-24!52;UBERON:0007135!1.35e-24!52;UBERON:0001017!1.79e-24!73;UBERON:0005743!1.79e-24!73;UBERON:0002020!2.04e-24!34;UBERON:0000073!3.04e-23!75;UBERON:0001016!3.04e-23!75;UBERON:0000955!3.15e-23!50;UBERON:0006238!3.15e-23!50;UBERON:0000033!5.93e-23!63;UBERON:0002616!2.38e-22!49;UBERON:0003056!9.20e-21!49;UBERON:0003080!1.71e-20!40;UBERON:0002791!1.85e-20!29;UBERON:0003528!1.85e-20!29;UBERON:0001893!1.85e-20!29;UBERON:0002780!1.18e-19!39;UBERON:0001890!1.18e-19!39;UBERON:0006240!1.18e-19!39;UBERON:0002346!1.42e-19!71;UBERON:0003075!1.42e-19!71;UBERON:0007284!1.42e-19!71;UBERON:0004121!2.35e-17!102;UBERON:0000924!2.35e-17!102;UBERON:0006601!2.35e-17!102;UBERON:0000956!1.36e-14!21;UBERON:0001869!1.36e-14!21;UBERON:0000203!1.36e-14!21;UBERON:0007811!1.94e-12!86;UBERON:0002619!5.36e-12!17;UBERON:0000153!8.96e-12!94;UBERON:0002021!6.31e-11!10;UBERON:0000411!6.31e-11!10;UBERON:0001950!6.31e-11!10;UBERON:0002420!4.80e-07!8;UBERON:0007245!4.80e-07!8;UBERON:0010009!4.80e-07!8;UBERON:0010011!4.80e-07!8;UBERON:0000454!4.80e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.11e-43,34;UBERON:0000073,5.05e-42,54;UBERON:0001049,7.17e-39,52;UBERON:0005068,7.17e-39,52;UBERON:0006241,7.17e-39,52;UBERON:0007135,7.17e-39,52;UBERON:0001017,4.93e-38,73;UBERON:0001016,1.01e-36,75;UBERON:0003528,3.49e-36,29;UBERON:0002791,3.49e-36,29;UBERON:0001893,3.49e-36,29;UBERON:0000955,6.93e-32,47;UBERON:0006238,6.93e-32,47;UBERON:0003080,2.63e-31,40;UBERON:0002616,2.36e-30,46;UBERON:0002780,8.61e-30,39;UBERON:0001890,8.61e-30,39;UBERON:0006240,8.61e-30,39;UBERON:0002346,1.05e-29,64;UBERON:0003075,1.05e-29,64;UBERON:0007284,1.05e-29,64;UBERON:0004121,1.20e-26,95;UBERON:0000924,1.20e-26,95;UBERON:0006601,1.20e-26,95;UBERON:0000956,4.36e-25,21;UBERON:0001869,4.36e-25,21;UBERON:0000203,4.36e-25,21;UBERON:0010371,8.14e-25,73;UBERON:0003056,4.88e-24,49;UBERON:0002619,2.12e-22,17;UBERON:0002021,3.02e-19,10;UBERON:0000411,3.02e-19,10;UBERON:0001950,3.02e-19,10;UBERON:0010314,1.18e-17,92;UBERON:0000025,2.22e-12,114;UBERON:0002420,6.29e-12,8;UBERON:0007245,6.29e-12,8;UBERON:0010009,6.29e-12,8;UBERON:0010011,6.29e-12,8;UBERON:0000454,6.29e-12,8;UBERON:0004111,6.06e-11,122;UBERON:0002240,8.78e-10,6;UBERON:0005174,8.78e-10,6;UBERON:0001137,8.78e-10,6;UBERON:0001948,2.36e-08,5;UBERON:0002315,2.36e-08,5;UBERON:0000369,7.34e-08,5;UBERON:0002435,7.34e-08,5;UBERON:0000204,7.34e-08,5;UBERON:0010082,7.34e-08,5;UBERON:0003076,8.97e-08,12;UBERON:0003057,8.97e-08,12;UBERON:0011216,1.96e-07,194;UBERON:0002950,3.77e-07,4;UBERON:0001891,3.77e-07,4;UBERON:0009616,3.77e-07,4;UBERON:0010286,3.77e-07,4
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,3.80298842103708,0,0,0,0,0,0,0,2.07379224616955,2.02508907497536,0.630974884054146,2.28520787523043,3.97563373712904,1.5923803897944,1.34183659425531,6.43453150627015,3.30347642998166,12.6410464704336,8.75557239560588,1.84640802822271,1.37231465403614,1.04182674111352,1.95428099300967,3.93933827022176,5.04234217663473,4.12480019663135,4.6982654663704,1.67759501242771,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,7.78911324905078,23.33253074375,3.5183218591602,16.5133104182663,24.0372529890511,11.6361304953354,16.2241263067758,0,0.124406970610093,0,0,0.650602214813519,0.229902104433473,0.180062129805349,0.150704817835715,0.408218994907967,0.2562274405697,0.281105173679186,0,0,0,0.351902248327898,0.219195732427575,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8231958851302,2.88132914661996,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,3.39913891117389,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,13.1741739732941,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0.590603785761546,1.53717573971964,0.516856586336442,0.363533729477506,0.356497378384721,1.26414703174326,0,0,0,0,0.258717367565509,0,0.532020700926821,0.713475270408282,0.329098041204242,0,0,0,0,0,0,0,0,0,0,4.07935664423121,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0,0,28.8023439734704,34.5243927380383,25.2074025913335,42.1040296742035,34.9392085083028,31.7265436903674,33.7511250115903,24.3173449741079,18.1256963593682,21.2281727818246,0,0,0.170733605754134,0.729320151204882,0,0.183843508450014,0.666740183404846,0.618105171716683,0.962757628775446,0.252697211763798,0.50695859978048,0.943131706930381,0.468207537349412,0.960377286073039,0.861532034334199,0.952587382566147,0.695305955669133,1.15745532278223,0.412085900803307,0.735994600671987,1.02860775715625,0.70990322463735,0.238436189947321,0.581385666529314,1.2234219453993,0.761531471025089,0.914639864363863,0.526139422875686,1.35804113845862,1.12228454331548,0.474540072496697,0.788035859004508,0.409231043169689,0.929621047115796,1.15743966588685,0.499621155875892,1.16965804222704,0.859484216193193,0,0,0
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22548106945558,2.11596391708813,3.80298842103708,0,0,0,0,0,0,0,2.07379224616955,2.02508907497536,0.630974884054146,2.28520787523043,3.97563373712904,1.5923803897944,1.34183659425531,6.43453150627015,3.30347642998166,12.6410464704336,8.75557239560588,1.84640802822271,1.37231465403614,1.04182674111352,1.95428099300967,3.93933827022176,5.04234217663473,4.12480019663135,4.6982654663704,1.67759501242771,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,7.78911324905078,23.33253074375,3.5183218591602,16.5133104182663,24.0372529890511,11.6361304953354,16.2241263067758,0,0.124406970610093,0,0,0.650602214813519,0.229902104433473,0.180062129805349,0.150704817835715,0.408218994907967,0.2562274405697,0.281105173679186,0,0,0,0.351902248327898,0.219195732427575,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8231958851302,2.88132914661996,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,3.39913891117389,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,13.1741739732941,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0.590603785761546,1.53717573971964,0.516856586336442,0.363533729477506,0.356497378384721,1.26414703174326,0,0,0,0,0.258717367565509,0,0.532020700926821,0.713475270408282,0.329098041204242,0,0,0,0,0,0,0,0,0,0,4.07935664423121,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0,0,28.8023439734704,34.5243927380383,25.2074025913335,42.1040296742035,34.9392085083028,31.7265436903674,33.7511250115903,24.3173449741079,18.1256963593682,21.2281727818246,0,0,0.170733605754134,0.729320151204882,0,0.183843508450014,0.666740183404846,0.618105171716683,0.962757628775446,0.252697211763798,0.50695859978048,0.943131706930381,0.468207537349412,0.960377286073039,0.861532034334199,0.952587382566147,0.695305955669133,1.15745532278223,0.412085900803307,0.735994600671987,1.02860775715625,0.70990322463735,0.238436189947321,0.581385666529314,1.2234219453993,0.761531471025089,0.914639864363863,0.526139422875686,1.35804113845862,1.12228454331548,0.474540072496697,0.788035859004508,0.409231043169689,0.929621047115796,1.15743966588685,0.499621155875892,1.16965804222704,0.859484216193193,0,0,0
|short_description=p3@Lrrc7
}}
}}

Latest revision as of 20:38, 1 October 2015

Short description:p3@Lrrc7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lrrc7_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000106044, NM_001081358, uc008rvw.1, uc008rvx.1, uc012dac.1_5end
EntrezGene:Lrrc7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lrrc7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.79
corpus striatum, adult.CNhs10487.19-21D823.33
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D516.51
cortex, neonate N30.CNhs11107.1392-42F224.04
diencephalon, adult.CNhs10482.20-12F211.64
diencephalon, neonate N30.CNhs11201.1388-42B216.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E816.82
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I913.17
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A128.80
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A234.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D742.10
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.94
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A531.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.23
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.01e-2923
neuroblast (sensu Vertebrata)4.01e-2923
neuron1.73e-1833
neuronal stem cell1.73e-1833
neuroblast1.73e-1833
electrically signaling cell1.73e-1833
electrically responsive cell9.46e-1539
electrically active cell9.46e-1539
neural cell7.53e-1343
ectodermal cell1.98e-1244
neurectodermal cell1.98e-1244

Uber anatomy
Ontology termp-valuen
gray matter1.11e-4334
regional part of nervous system5.05e-4254
neural tube7.17e-3952
neural rod7.17e-3952
future spinal cord7.17e-3952
neural keel7.17e-3952
central nervous system4.93e-3873
nervous system1.01e-3675
brain grey matter3.49e-3629
regional part of telencephalon3.49e-3629
telencephalon3.49e-3629
brain6.93e-3247
future brain6.93e-3247
anterior neural tube2.63e-3140
regional part of brain2.36e-3046
regional part of forebrain8.61e-3039
forebrain8.61e-3039
future forebrain8.61e-3039
neurectoderm1.05e-2964
neural plate1.05e-2964
presumptive neural plate1.05e-2964
ectoderm-derived structure1.20e-2695
ectoderm1.20e-2695
presumptive ectoderm1.20e-2695
cerebral cortex4.36e-2521
cerebral hemisphere4.36e-2521
pallium4.36e-2521
ecto-epithelium8.14e-2573
pre-chordal neural plate4.88e-2449
regional part of cerebral cortex2.12e-2217
occipital lobe3.02e-1910
visual cortex3.02e-1910
neocortex3.02e-1910
structure with developmental contribution from neural crest1.18e-1792
tube2.22e-12114
basal ganglion6.29e-128
nuclear complex of neuraxis6.29e-128
aggregate regional part of brain6.29e-128
collection of basal ganglia6.29e-128
cerebral subcortex6.29e-128
anatomical conduit6.06e-11122
spinal cord8.78e-106
dorsal region element8.78e-106
dorsum8.78e-106
regional part of spinal cord2.36e-085
gray matter of spinal cord2.36e-085
corpus striatum7.34e-085
striatum7.34e-085
ventral part of telencephalon7.34e-085
future corpus striatum7.34e-085
posterior neural tube8.97e-0812
chordal neural plate8.97e-0812
organ system subdivision1.96e-07194
regional part of midbrain3.77e-074
midbrain3.77e-074
presumptive midbrain3.77e-074
midbrain neural tube3.77e-074
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