FFCP PHASE1:Mm9::chr19:16207791..16207818,+: Difference between revisions
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{{FFCP|EntrezGene=14682|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=5bp_to_ENSMUST00000170229_5end|description=CAGE_peak_6_at_Gnaq_5end|id=chr19:16207791..16207818,+|ontology_enrichment_celltype=CL:0000540!1.55e-10!33;CL:0000047!1.55e-10!33;CL:0000031!1.55e-10!33;CL:0000404!1.55e-10!33;CL:0000117!2.62e-10!23;CL:0000337!2.62e-10!23;CL:0000393!2.02e-09!39;CL:0000211!2.02e-09!39;CL:0000221!6.56e-07!44;CL:0000133!6.56e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,9.45e-19,23;CL:0000337,9.45e-19,23;CL:0000540,7.37e-13,33;CL:0000047,7.37e-13,33;CL:0000031,7.37e-13,33;CL:0000404,7.37e-13,33;CL:0000393,3.32e-11,39;CL:0000211,3.32e-11,39;CL:0002319,1.10e-08,43;CL:0000221,2.24e-08,44;CL:0000133,2.24e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.21e-22!102;UBERON:0000924!4.21e-22!102;UBERON:0006601!4.21e-22!102;UBERON:0001017!2.85e-21!73;UBERON:0005743!2.85e-21!73;UBERON:0002346!3.79e-21!71;UBERON:0003075!3.79e-21!71;UBERON:0007284!3.79e-21!71;UBERON:0000073!4.08e-21!75;UBERON:0001016!4.08e-21!75;UBERON:0000033!4.48e-20!63;UBERON:0001049!4.75e-19!52;UBERON:0005068!4.75e-19!52;UBERON:0006241!4.75e-19!52;UBERON:0007135!4.75e-19!52;UBERON:0000955!1.12e-17!50;UBERON:0006238!1.12e-17!50;UBERON:0003056!1.14e-17!49;UBERON:0002616!3.86e-17!49;UBERON:0002020!1.10e-15!34;UBERON:0003080!2.15e-15!40;UBERON:0002780!8.41e-15!39;UBERON:0001890!8.41e-15!39;UBERON:0006240!8.41e-15!39;UBERON:0002791!1.22e-12!29;UBERON:0003528!1.22e-12!29;UBERON:0001893!1.22e-12!29;UBERON:0007811!5.17e-10!86;UBERON:0000956!3.28e-08!21;UBERON:0001869!3.28e-08!21;UBERON:0000203!3.28e-08!21;UBERON:0002021!5.62e-08!10;UBERON:0000411!5.62e-08!10;UBERON:0001950!5.62e-08!10;UBERON:0002619!1.74e-07!17;UBERON:0000153!3.08e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.72e-35,54;UBERON:0002346,1.69e-34,64;UBERON:0003075,1.69e-34,64;UBERON:0007284,1.69e-34,64;UBERON:0001017,9.30e-34,73;UBERON:0001049,9.54e-33,52;UBERON:0005068,9.54e-33,52;UBERON:0006241,9.54e-33,52;UBERON:0007135,9.54e-33,52;UBERON:0001016,1.55e-32,75;UBERON:0002020,9.74e-31,34;UBERON:0004121,7.21e-30,95;UBERON:0000924,7.21e-30,95;UBERON:0006601,7.21e-30,95;UBERON:0010371,8.10e-29,73;UBERON:0000955,5.01e-26,47;UBERON:0006238,5.01e-26,47;UBERON:0002616,7.06e-25,46;UBERON:0003056,4.09e-24,49;UBERON:0003528,1.13e-23,29;UBERON:0002791,1.13e-23,29;UBERON:0001893,1.13e-23,29;UBERON:0003080,4.67e-22,40;UBERON:0010314,1.19e-21,92;UBERON:0002780,8.15e-21,39;UBERON:0001890,8.15e-21,39;UBERON:0006240,8.15e-21,39;UBERON:0002021,6.80e-17,10;UBERON:0000411,6.80e-17,10;UBERON:0001950,6.80e-17,10;UBERON:0002619,5.00e-15,17;UBERON:0000956,1.38e-13,21;UBERON:0001869,1.38e-13,21;UBERON:0000203,1.38e-13,21;UBERON:0002420,5.23e-12,8;UBERON:0007245,5.23e-12,8;UBERON:0010009,5.23e-12,8;UBERON:0010011,5.23e-12,8;UBERON:0000454,5.23e-12,8;UBERON:0003076,3.89e-11,12;UBERON:0003057,3.89e-11,12;UBERON:0000025,5.70e-11,114;UBERON:0004111,1.34e-09,122;UBERON:0002240,1.47e-09,6;UBERON:0005174,1.47e-09,6;UBERON:0001137,1.47e-09,6;UBERON:0001948,1.70e-08,5;UBERON:0002315,1.70e-08,5;UBERON:0000369,3.73e-08,5;UBERON:0002435,3.73e-08,5;UBERON:0000204,3.73e-08,5;UBERON:0010082,3.73e-08,5;UBERON:0000483,5.84e-08,174;UBERON:0000119,9.66e-08,176;UBERON:0002950,9.17e-07,4;UBERON:0001891,9.17e-07,4;UBERON:0009616,9.17e-07,4;UBERON:0010286,9.17e-07,4|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0,0.700837921786577,0.258246646883153,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,0.850432901510698,0,0,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,0,0,0,0.418531630736908,0,1.0470474879476,0,0.683045484958446,0.485510353031154,0.377690453926732,0.506884656097573,0.183546752161682,0,0,0.219686182734472,0.388859798148567,0,0,0.335565212115473,0,0,0,0.286533439938757,1.03134418455488,4.24864567805155,3.1739458756322,5.70448263155561,0,0.889294796111139,0,0.988866362566974,0,0,0.384218305321555,0.414758449233911,0.540023753326763,0.630974884054146,2.57085885963423,2.65042249141936,1.5923803897944,0.575072826109418,0,3.30347642998166,2.55374676170375,2.30409799884365,3.95658863190582,3.47653045689157,1.04182674111352,3.62937898701795,2.25105044012672,2.90316670775939,4.71405736757868,4.41352210477219,3.91438836233131,0.454357159999104,0.302286240427142,0.579728977403356,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0.35333957451034,0.985903938436763,2.56652954828636,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0,0.445326417194474,0.520455980298408,0.304465478312141,0.230615497256059,0.452167921657868,0.705532242814229,0.251333182659351,0,0.289198713839823,0.884610551949874,0.323533699894818,0,0,0,2.04946557908083,1.8850203613211,0,0.718890747035522,0,0.254140454146129,3.2953940669061,5.94750783664214,3.01570445070875,5.56237824615285,5.37002460393694,2.0778804455956,2.59586020908412,0.407357455401265,0.124406970610093,0.758168275301024,0.420883711772948,0.260240885925407,1.37941262660084,0.540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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14682 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENSMUST00000170229_5end | |||
|cluster_id=chr19:16207791..16207818,+ | |||
|description=CAGE_peak_6_at_Gnaq_5end | |||
|id=chr19:16207791..16207818,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.55e-10!33;CL:0000047!1.55e-10!33;CL:0000031!1.55e-10!33;CL:0000404!1.55e-10!33;CL:0000117!2.62e-10!23;CL:0000337!2.62e-10!23;CL:0000393!2.02e-09!39;CL:0000211!2.02e-09!39;CL:0000221!6.56e-07!44;CL:0000133!6.56e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.45e-19,23;CL:0000337,9.45e-19,23;CL:0000540,7.37e-13,33;CL:0000047,7.37e-13,33;CL:0000031,7.37e-13,33;CL:0000404,7.37e-13,33;CL:0000393,3.32e-11,39;CL:0000211,3.32e-11,39;CL:0002319,1.10e-08,43;CL:0000221,2.24e-08,44;CL:0000133,2.24e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.21e-22!102;UBERON:0000924!4.21e-22!102;UBERON:0006601!4.21e-22!102;UBERON:0001017!2.85e-21!73;UBERON:0005743!2.85e-21!73;UBERON:0002346!3.79e-21!71;UBERON:0003075!3.79e-21!71;UBERON:0007284!3.79e-21!71;UBERON:0000073!4.08e-21!75;UBERON:0001016!4.08e-21!75;UBERON:0000033!4.48e-20!63;UBERON:0001049!4.75e-19!52;UBERON:0005068!4.75e-19!52;UBERON:0006241!4.75e-19!52;UBERON:0007135!4.75e-19!52;UBERON:0000955!1.12e-17!50;UBERON:0006238!1.12e-17!50;UBERON:0003056!1.14e-17!49;UBERON:0002616!3.86e-17!49;UBERON:0002020!1.10e-15!34;UBERON:0003080!2.15e-15!40;UBERON:0002780!8.41e-15!39;UBERON:0001890!8.41e-15!39;UBERON:0006240!8.41e-15!39;UBERON:0002791!1.22e-12!29;UBERON:0003528!1.22e-12!29;UBERON:0001893!1.22e-12!29;UBERON:0007811!5.17e-10!86;UBERON:0000956!3.28e-08!21;UBERON:0001869!3.28e-08!21;UBERON:0000203!3.28e-08!21;UBERON:0002021!5.62e-08!10;UBERON:0000411!5.62e-08!10;UBERON:0001950!5.62e-08!10;UBERON:0002619!1.74e-07!17;UBERON:0000153!3.08e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.72e-35,54;UBERON:0002346,1.69e-34,64;UBERON:0003075,1.69e-34,64;UBERON:0007284,1.69e-34,64;UBERON:0001017,9.30e-34,73;UBERON:0001049,9.54e-33,52;UBERON:0005068,9.54e-33,52;UBERON:0006241,9.54e-33,52;UBERON:0007135,9.54e-33,52;UBERON:0001016,1.55e-32,75;UBERON:0002020,9.74e-31,34;UBERON:0004121,7.21e-30,95;UBERON:0000924,7.21e-30,95;UBERON:0006601,7.21e-30,95;UBERON:0010371,8.10e-29,73;UBERON:0000955,5.01e-26,47;UBERON:0006238,5.01e-26,47;UBERON:0002616,7.06e-25,46;UBERON:0003056,4.09e-24,49;UBERON:0003528,1.13e-23,29;UBERON:0002791,1.13e-23,29;UBERON:0001893,1.13e-23,29;UBERON:0003080,4.67e-22,40;UBERON:0010314,1.19e-21,92;UBERON:0002780,8.15e-21,39;UBERON:0001890,8.15e-21,39;UBERON:0006240,8.15e-21,39;UBERON:0002021,6.80e-17,10;UBERON:0000411,6.80e-17,10;UBERON:0001950,6.80e-17,10;UBERON:0002619,5.00e-15,17;UBERON:0000956,1.38e-13,21;UBERON:0001869,1.38e-13,21;UBERON:0000203,1.38e-13,21;UBERON:0002420,5.23e-12,8;UBERON:0007245,5.23e-12,8;UBERON:0010009,5.23e-12,8;UBERON:0010011,5.23e-12,8;UBERON:0000454,5.23e-12,8;UBERON:0003076,3.89e-11,12;UBERON:0003057,3.89e-11,12;UBERON:0000025,5.70e-11,114;UBERON:0004111,1.34e-09,122;UBERON:0002240,1.47e-09,6;UBERON:0005174,1.47e-09,6;UBERON:0001137,1.47e-09,6;UBERON:0001948,1.70e-08,5;UBERON:0002315,1.70e-08,5;UBERON:0000369,3.73e-08,5;UBERON:0002435,3.73e-08,5;UBERON:0000204,3.73e-08,5;UBERON:0010082,3.73e-08,5;UBERON:0000483,5.84e-08,174;UBERON:0000119,9.66e-08,176;UBERON:0002950,9.17e-07,4;UBERON:0001891,9.17e-07,4;UBERON:0009616,9.17e-07,4;UBERON:0010286,9.17e-07,4 | |||
|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0,0.700837921786577,0.258246646883153,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,0.850432901510698,0,0,0,0,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,0,0,0,0.418531630736908,0,1.0470474879476,0,0.683045484958446,0.485510353031154,0.377690453926732,0.506884656097573,0.183546752161682,0,0,0.219686182734472,0.388859798148567,0,0,0.335565212115473,0,0,0,0.286533439938757,1.03134418455488,4.24864567805155,3.1739458756322,5.70448263155561,0,0.889294796111139,0,0.988866362566974,0,0,0.384218305321555,0.414758449233911,0.540023753326763,0.630974884054146,2.57085885963423,2.65042249141936,1.5923803897944,0.575072826109418,0,3.30347642998166,2.55374676170375,2.30409799884365,3.95658863190582,3.47653045689157,1.04182674111352,3.62937898701795,2.25105044012672,2.90316670775939,4.71405736757868,4.41352210477219,3.91438836233131,0.454357159999104,0.302286240427142,0.579728977403356,0,0,0,0,0,0,0.511290967734173,0.259786004602869,0.35333957451034,0.985903938436763,2.56652954828636,0,0,0.216491041011214,0.253359865475099,0,0.45673551887624,0,0.445326417194474,0.520455980298408,0.304465478312141,0.230615497256059,0.452167921657868,0.705532242814229,0.251333182659351,0,0.289198713839823,0.884610551949874,0.323533699894818,0,0,0,2.04946557908083,1.8850203613211,0,0.718890747035522,0,0.254140454146129,3.2953940669061,5.94750783664214,3.01570445070875,5.56237824615285,5.37002460393694,2.0778804455956,2.59586020908412,0.407357455401265,0.124406970610093,0.758168275301024,0.420883711772948,0.260240885925407,1.37941262660084,0.540186389416048,1.05493372485001,1.90502197623718,1.5373646434182,1.03071897015702,0.776110112217047,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,1.02939162845886,0.568326998791185,0,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.56748166682099,0,0,0.268412837520744,5.88811855979556,2.77842453424068,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0,0.754005626400808,0.596869416123452,0.19496408711912,0.898819408654221,0,0.597423819763102,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0.420814919341911,0.442655759869801,0.147610147979602,0.470996183524124,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0,0.505157755894224,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0.169745085775188,0,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0.163863314715738,1.38147985492716,0.289298117163023,0,0.54390568381871,0,0,1.60550589987792,2.10981035865966,0.327869890753351,0,0.315508219416257,0.390438744296638,1.07711698866399,0.238968797952552,0.891194696329576,0.283076530788832,0.809621403349789,0.876767573733936,0.395287777946524,2.24924921495265,0.567760340833074,0,0.488660878060728,0.494910368917606,0,0.242780636154981,0.906970670894253,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,1.02131881726136,0.540183282093931,0.258717367565509,0.643011105094777,0.709360934569094,0.535106452806212,0.658196082408484,0.913394847343798,0.938686832254841,0,0.220528398054962,0.32977250588296,0.645857706783622,0.301564624640779,0.596861720015682,0.820704498725306,0,2.03967832211561,0.341741761595705,0.412773735926445,0,0.188368457004691,0,0,1.35982743995084,1.11961161858926,0.552799895217695,0,0,0.406638934253697,0.108005340821801,0.627264888043406,0.218362563746178,0.269728692769641,0.330613822901344,0.26175594198403,0.129614973291793,0.621339313086926,0,0.448549638131936,0.496375471371293,0.194451188344048,0.258319646955462,0.337912250981556,0.352071715937262,0.39061315453185,0.419437377702843,0,0,0,0.202725215290164,0.513554785824136,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.0962118416403295,0,0,0.221985953374065,0.269141569828427,0,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0,3.95326289831947,5.52390283808612,4.58316410751517,5.15559547031063,6.85082519770642,6.0431511791176,6.75022500231806,3.60256962579376,4.07828168085784,3.10656187051092,0.415149390336707,1.19707462020309,0.853668028770671,0.729320151204882,0.838452650511929,0.183843508450014,2.22246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.468207537349412,0.576226371643824,0.746661096422973,0.476293691283074,0.463537303779422,0.578727661391115,0.824171801606613,0.294397840268795,0.342869252385415,1.24233064311536,0,0.726732083161643,0.564656282491984,0.507687647350059,0.73171189149109,0.526139422875686,0.407412341537585,0.561142271657738,0.711810108745045,0.985044823755635,0.409231043169689,0.77468420592983,0.964533054905707,1.99848462350357,0.4678632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| |||
|short_description=p6@Gnaq | |||
}} |
Latest revision as of 22:47, 1 October 2015
Short description: | p6@Gnaq |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Gnaq_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 5bp_to_ENSMUST00000170229_5end |
EntrezGene: | Gnaq |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.45e-19 | 23 |
neuroblast (sensu Vertebrata) | 9.45e-19 | 23 |
neuron | 7.37e-13 | 33 |
neuronal stem cell | 7.37e-13 | 33 |
neuroblast | 7.37e-13 | 33 |
electrically signaling cell | 7.37e-13 | 33 |
electrically responsive cell | 3.32e-11 | 39 |
electrically active cell | 3.32e-11 | 39 |
neural cell | 1.10e-08 | 43 |
ectodermal cell | 2.24e-08 | 44 |
neurectodermal cell | 2.24e-08 | 44 |