FFCP PHASE1:Hg19::chr10:25241499..25241541,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56952 | |EntrezGene=56952 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23333 | |HGNC=23333 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRG1,F8WCE0 | |UniProt=Q9NRG1,F8WCE0 | ||
|association_with_transcript=0bp_to_ENST00000320152,ENST00000358336,ENST00000376376,ENST00000376378,NM_020200,uc001ise.1,uc001isf.1,uc009xkm.1,uc010qdd.1_5end | |association_with_transcript=0bp_to_ENST00000320152,ENST00000358336,ENST00000376376,ENST00000376378,NM_020200,uc001ise.1,uc001isf.1,uc009xkm.1,uc010qdd.1_5end | ||
|cluster_id=chr10:25241499..25241541,- | |||
|description=CAGE_peak_1_at_PRTFDC1_5end | |description=CAGE_peak_1_at_PRTFDC1_5end | ||
|id=chr10:25241499..25241541,- | |id=chr10:25241499..25241541,- | ||
|ontology_enrichment_celltype=CL:0000055!1.73e-11!180;CL:0000057!3.02e-07!75;CL:0002319!6.67e-07!25 | |ontology_enrichment_celltype=CL:0000055!1.73e-11!180;CL:0000057!3.02e-07!75;CL:0002319!6.67e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.48e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.09e-07,76;CL:0002319,5.40e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.70e-28!94;UBERON:0001016!3.70e-28!94;UBERON:0005743!4.64e-26!86;UBERON:0001017!1.06e-25!82;UBERON:0000475!2.85e-23!365;UBERON:0000955!3.17e-22!69;UBERON:0006238!3.17e-22!69;UBERON:0001049!7.67e-22!57;UBERON:0005068!7.67e-22!57;UBERON:0006241!7.67e-22!57;UBERON:0007135!7.67e-22!57;UBERON:0000481!1.31e-21!347;UBERON:0000119!4.96e-21!312;UBERON:0000924!1.23e-20!173;UBERON:0006601!1.23e-20!173;UBERON:0000483!1.39e-20!309;UBERON:0004121!2.84e-20!169;UBERON:0000033!6.14e-20!123;UBERON:0002616!1.08e-19!59;UBERON:0002346!7.70e-19!90;UBERON:0003075!1.20e-18!86;UBERON:0007284!1.20e-18!86;UBERON:0000153!1.75e-18!129;UBERON:0007811!1.75e-18!129;UBERON:0000468!4.89e-18!659;UBERON:0000025!6.04e-18!194;UBERON:0004111!6.29e-18!241;UBERON:0000477!8.59e-18!286;UBERON:0002780!2.63e-17!41;UBERON:0001890!2.63e-17!41;UBERON:0006240!2.63e-17!41;UBERON:0001893!4.59e-17!34;UBERON:0002020!8.41e-17!34;UBERON:0003528!8.41e-17!34;UBERON:0003080!1.31e-16!42;UBERON:0002791!1.63e-16!33;UBERON:0000467!4.97e-16!625;UBERON:0000480!8.10e-16!626;UBERON:0001869!8.76e-16!32;UBERON:0000922!2.41e-15!612;UBERON:0003056!5.07e-15!61;UBERON:0002050!1.99e-14!605;UBERON:0005423!1.99e-14!605;UBERON:0000923!4.29e-14!604;UBERON:0005291!4.29e-14!604;UBERON:0006598!4.29e-14!604;UBERON:0002532!4.29e-14!604;UBERON:0000064!4.06e-13!219;UBERON:0000956!4.84e-12!25;UBERON:0000203!4.84e-12!25;UBERON:0007023!1.99e-10!115;UBERON:0002619!3.15e-10!22;UBERON:0000062!8.79e-10!511;UBERON:0001950!2.06e-09!20 | |ontology_enrichment_uberon=UBERON:0000073!3.70e-28!94;UBERON:0001016!3.70e-28!94;UBERON:0005743!4.64e-26!86;UBERON:0001017!1.06e-25!82;UBERON:0000475!2.85e-23!365;UBERON:0000955!3.17e-22!69;UBERON:0006238!3.17e-22!69;UBERON:0001049!7.67e-22!57;UBERON:0005068!7.67e-22!57;UBERON:0006241!7.67e-22!57;UBERON:0007135!7.67e-22!57;UBERON:0000481!1.31e-21!347;UBERON:0000119!4.96e-21!312;UBERON:0000924!1.23e-20!173;UBERON:0006601!1.23e-20!173;UBERON:0000483!1.39e-20!309;UBERON:0004121!2.84e-20!169;UBERON:0000033!6.14e-20!123;UBERON:0002616!1.08e-19!59;UBERON:0002346!7.70e-19!90;UBERON:0003075!1.20e-18!86;UBERON:0007284!1.20e-18!86;UBERON:0000153!1.75e-18!129;UBERON:0007811!1.75e-18!129;UBERON:0000468!4.89e-18!659;UBERON:0000025!6.04e-18!194;UBERON:0004111!6.29e-18!241;UBERON:0000477!8.59e-18!286;UBERON:0002780!2.63e-17!41;UBERON:0001890!2.63e-17!41;UBERON:0006240!2.63e-17!41;UBERON:0001893!4.59e-17!34;UBERON:0002020!8.41e-17!34;UBERON:0003528!8.41e-17!34;UBERON:0003080!1.31e-16!42;UBERON:0002791!1.63e-16!33;UBERON:0000467!4.97e-16!625;UBERON:0000480!8.10e-16!626;UBERON:0001869!8.76e-16!32;UBERON:0000922!2.41e-15!612;UBERON:0003056!5.07e-15!61;UBERON:0002050!1.99e-14!605;UBERON:0005423!1.99e-14!605;UBERON:0000923!4.29e-14!604;UBERON:0005291!4.29e-14!604;UBERON:0006598!4.29e-14!604;UBERON:0002532!4.29e-14!604;UBERON:0000064!4.06e-13!219;UBERON:0000956!4.84e-12!25;UBERON:0000203!4.84e-12!25;UBERON:0007023!1.99e-10!115;UBERON:0002619!3.15e-10!22;UBERON:0000062!8.79e-10!511;UBERON:0001950!2.06e-09!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.90e-15;34!UBERON:0002791;1.03e-14;32!UBERON:0003528;1.13e-14;34!UBERON:0002020;1.13e-14;34!UBERON:0001869;1.52e-14;32!UBERON:0002780;5.04e-13;41!UBERON:0001890;5.04e-13;41!UBERON:0000073;9.39e-13;53!UBERON:0002616;9.39e-13;53!UBERON:0000956;2.93e-12;25!UBERON:0000203;2.93e-12;25!UBERON:0001016;9.05e-11;83!UBERON:0001017;1.16e-10;75!UBERON:0002619;2.03e-10;22!UBERON:0000955;2.22e-10;68!UBERON:0001950;1.42e-09;20!UBERON:0011216;8.34e-08;132 | |||
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|short_description=p1@PRTFDC1 | |short_description=p1@PRTFDC1 | ||
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Latest revision as of 17:03, 17 September 2015
Short description: | p1@PRTFDC1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRTFDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000320152, ENST00000358336, ENST00000376376, ENST00000376378, NM_020200, uc001ise.1, uc001isf.1, uc009xkm.1, uc010qdd.1_5end |
EntrezGene: | PRTFDC1 |
HGNC: | 23333 |
UniProt: | Q9NRG1F8WCE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.09e-07 | 76 |
neural cell | 5.40e-07 | 25 |