FFCP PHASE1:Hg19::chr19:39811570..39811591,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-81bp_to_uc010egm.1_5end | |association_with_transcript=-81bp_to_uc010egm.1_5end | ||
|cluster_id=chr19:39811570..39811591,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_uc010egm.1_5end | |description=CAGE_peak_2_at_uc010egm.1_5end | ||
|id=chr19:39811570..39811591,- | |id=chr19:39811570..39811591,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.10e-10;3!UBERON:0006601;3.11e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.07e-34!57;UBERON:0005068!5.07e-34!57;UBERON:0006241!5.07e-34!57;UBERON:0007135!5.07e-34!57;UBERON:0001017!9.16e-34!82;UBERON:0000073!1.09e-32!94;UBERON:0001016!1.09e-32!94;UBERON:0005743!1.66e-32!86;UBERON:0000955!6.17e-32!69;UBERON:0006238!6.17e-32!69;UBERON:0002780!2.65e-29!41;UBERON:0001890!2.65e-29!41;UBERON:0006240!2.65e-29!41;UBERON:0002616!5.87e-29!59;UBERON:0002346!1.15e-28!90;UBERON:0003080!2.61e-28!42;UBERON:0003075!3.82e-27!86;UBERON:0007284!3.82e-27!86;UBERON:0002020!5.47e-27!34;UBERON:0003528!5.47e-27!34;UBERON:0001893!1.29e-26!34;UBERON:0001869!2.11e-25!32;UBERON:0002791!2.20e-25!33;UBERON:0002619!8.98e-22!22;UBERON:0003056!4.11e-20!61;UBERON:0000956!5.90e-20!25;UBERON:0000203!5.90e-20!25;UBERON:0001950!1.89e-19!20;UBERON:0000924!1.84e-18!173;UBERON:0006601!1.84e-18!173;UBERON:0004121!3.24e-17!169;UBERON:0000033!3.49e-17!123;UBERON:0007023!2.04e-16!115;UBERON:0000153!1.47e-15!129;UBERON:0007811!1.47e-15!129;UBERON:0001871!8.38e-09!7;UBERON:0002420!1.13e-08!9;UBERON:0007245!1.13e-08!9;UBERON:0010009!1.13e-08!9;UBERON:0010011!1.13e-08!9;UBERON:0000454!1.13e-08!9;UBERON:0002308!1.85e-08!9;UBERON:0000125!1.85e-08!9;UBERON:0001872!9.56e-08!5;UBERON:0000349!1.29e-07!5;UBERON:0003076!4.12e-07!15;UBERON:0003057!4.12e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.50e-83;22!UBERON:0001950;3.08e-81;20!UBERON:0000956;1.52e-73;25!UBERON:0000203;1.52e-73;25!UBERON:0001869;1.03e-54;32!UBERON:0001893;4.92e-50;34!UBERON:0003528;3.81e-49;34!UBERON:0002020;3.81e-49;34!UBERON:0002791;4.43e-49;32!UBERON:0002780;8.02e-40;41!UBERON:0001890;8.02e-40;41!UBERON:0000073;1.25e-34;53!UBERON:0002616;1.25e-34;53!UBERON:0001871;5.86e-25;6!UBERON:0000955;7.75e-23;68!UBERON:0001872;1.64e-22;5!UBERON:0002021;1.64e-22;5!UBERON:0001017;1.07e-19;75!UBERON:0000200;4.29e-19;6!UBERON:0001016;1.04e-17;83!UBERON:0001876;1.03e-14;2!UBERON:0000349;6.08e-13;5!UBERON:0001870;4.10e-10;3!UBERON:0004733;2.40e-09;12!UBERON:0002028;2.40e-09;12!UBERON:0011216;4.14e-09;132!UBERON:0002902;1.17e-08;1!UBERON:0009899;1.17e-08;1!UBERON:0007190;1.17e-08;1!UBERON:0004732;1.23e-08;13!UBERON:0002581;3.32e-08;1!UBERON:0002022;3.32e-08;1!UBERON:0003112;3.32e-08;1!UBERON:0011158;3.32e-08;1!UBERON:0003128;3.32e-08;1!UBERON:0001703;3.32e-08;1!UBERON:0002241;3.32e-08;1!UBERON:0007023;4.81e-08;114!UBERON:0002680;2.09e-07;9!UBERON:0001895;2.09e-07;9!UBERON:0010314;8.22e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.80e-84,22;UBERON:0001950,6.39e-82,20;UBERON:0000956,3.44e-74,25;UBERON:0000203,3.44e-74,25;UBERON:0001869,4.33e-65,32;UBERON:0000073,1.62e-63,53;UBERON:0002616,1.62e-63,53;UBERON:0001893,3.55e-61,34;UBERON:0003528,7.56e-61,34;UBERON:0002020,7.56e-61,34;UBERON:0001049,5.86e-60,56;UBERON:0005068,5.86e-60,56;UBERON:0006241,5.86e-60,56;UBERON:0007135,5.86e-60,56;UBERON:0002791,8.99e-58,32;UBERON:0000955,1.72e-57,68;UBERON:0006238,1.72e-57,68;UBERON:0002780,3.54e-56,41;UBERON:0001890,3.54e-56,41;UBERON:0003080,3.54e-56,41;UBERON:0006240,3.54e-56,41;UBERON:0001017,5.18e-52,81;UBERON:0001016,1.70e-46,89;UBERON:0003075,6.96e-40,82;UBERON:0007284,6.96e-40,82;UBERON:0002346,7.38e-38,86;UBERON:0003056,6.85e-37,61;UBERON:0010371,1.20e-30,104;UBERON:0010314,1.32e-25,132;UBERON:0007023,1.90e-25,114;UBERON:0001871,3.98e-25,6;UBERON:0001872,9.19e-23,5;UBERON:0002021,1.52e-22,5;UBERON:0004121,1.78e-22,171;UBERON:0000924,1.78e-22,171;UBERON:0006601,1.78e-22,171;UBERON:0000200,2.47e-19,6;UBERON:0011216,1.07e-17,223;UBERON:0001876,5.15e-15,2;UBERON:0000025,1.02e-14,192;UBERON:0000349,3.57e-13,5;UBERON:0004111,6.42e-11,240;UBERON:0001870,2.15e-10,3;UBERON:0004733,3.65e-09,12;UBERON:0002028,3.65e-09,12;UBERON:0007277,3.65e-09,12;UBERON:0002902,1.13e-08,1;UBERON:0009899,1.13e-08,1;UBERON:0007190,1.41e-08,1;UBERON:0002581,1.63e-08,1;UBERON:0004732,1.81e-08,13;UBERON:0002022,4.41e-08,1;UBERON:0003112,5.07e-08,1;UBERON:0011158,5.07e-08,1;UBERON:0003128,5.07e-08,1;UBERON:0001703,5.07e-08,1;UBERON:0002241,5.07e-08,1;UBERON:0004761,5.07e-08,1;UBERON:0009617,5.07e-08,1;UBERON:0000483,1.26e-07,306;UBERON:0000119,1.65e-07,309;UBERON:0003076,2.34e-07,15;UBERON:0003057,2.34e-07,15;UBERON:0002680,2.73e-07,9;UBERON:0001895,2.73e-07,9;UBERON:0010092,2.73e-07,9 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0.328875809207352,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.523916301990851,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.256686072559497,0,0,1.54657762555539,0.502548796003046,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0.490080431962063,0,0,0,0.318852545457645,0.199579371432817,0.191505370132367,0.211673582723883,0.324621940274555,0,0,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0.33307196799782,1.4098700508785,0,0,0.485442086998054,0,0.284136146806413,0,0,0,1.9882952955326,1.26602474769461,0,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,2.90799823828566,1.39152147242777,0,0,0.0874599999961957,0,0,0,0.472775363535873,0,0.291604613383254,0.173624994933292,0.885741385813839,0.844175070377856,0,1.3269511191747,1.18219047581419,0.87754158861589,0,0.139423744278603,0.0769502585037971,0,1.1528195219403,0.0897576444097721,0.54323685961004,0,0,0,0,0.470940769185074,0,0,0.19606253431774,0,0,0,0,0.163232808159148,0.282706142867882,0.432777279484182,0,0,0.611030144933625,0,0,0,0.134802265961354,0,0.702793337176017,0,0,0.242780379534093,0,0,1.22429104652196,0.063186579628488,0,0.207376382794494,0.664653872707185,0.661983911750998,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.451961481561065,0.274083849293502,0,1.64608069485285,0,0,0,0,0,0,0.171594997861965,0,0,0.235694034616795,0,0.104602846312333,0.203996435272644,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0.795229689809303,1.49823746722733,0,0.137539436597234,0,0,0,1.15424157650247,0.335434687599266,0.0788057072991982,0.262272940674991,0.105600336519406,0,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0.246277562248017,0.170388021785422,0.226624183040251,0,0,1.0342636508924,0.66116300871345,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,1.6274820991845,0,1.10929051536852,0.558867626472451,0.415045904808692,0,0,0.856396000634902,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0.453411851024545,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0.511577485214607,0.107824811396682,0,0.218419276384028,0.33946505990805,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0,0.899209151350433,0,1.59633859057151,1.64093091392604,1.00828678488687,2.55881834117606,1.13032951942296,0,0,0.235939446695481,0,0.115525666150338,0,0,0,0.0752103283492573,0.20170506870352,0.781514011233092,0,0,0,2.09366512317023,0.781078098613847,2.27355476151302,1.71222687523548,1.09394961803644,0,0,0,0,0.535701835878287,1.00885116665647,0.606965604236632,0,0,0,0,0.679697329768317,1.97318320688547,0.236387681767936,0.111231401892069,0,0.471346769748006,0,0,0,0.47775168788705,0.142953088353313,0.632054446930906,0.116241425368125,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0.198950775161368,0.475680363110274,0,0.219881033490858,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0.473314686579554,2.71965960763659,0,0,0,0,0,0,0.327796715891087,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0.328875809207352,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.523916301990851,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.256686072559497,0,0,1.54657762555539,0.502548796003046,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0.490080431962063,0,0,0,0.318852545457645,0.199579371432817,0.191505370132367,0.211673582723883,0.324621940274555,0,0,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0.33307196799782,1.4098700508785,0,0,0.485442086998054,0,0.284136146806413,0,0,0,1.9882952955326,1.26602474769461,0,0,0.211125408127993,0,0,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,2.90799823828566,1.39152147242777,0,0,0.0874599999961957,0,0,0,0.472775363535873,0,0.291604613383254,0.173624994933292,0.885741385813839,0.844175070377856,0,1.3269511191747,1.18219047581419,0.87754158861589,0,0.139423744278603,0.0769502585037971,0,1.1528195219403,0.0897576444097721,0.54323685961004,0,0,0,0,0.470940769185074,0,0,0.19606253431774,0,0,0,0,0.163232808159148,0.282706142867882,0.432777279484182,0,0,0.611030144933625,0,0,0,0.134802265961354,0,0.702793337176017,0,0,0.242780379534093,0,0,1.22429104652196,0.063186579628488,0,0.207376382794494,0.664653872707185,0.661983911750998,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0.451961481561065,0.274083849293502,0,1.64608069485285,0,0,0,0,0,0,0.171594997861965,0,0,0.235694034616795,0,0.104602846312333,0.203996435272644,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0.795229689809303,1.49823746722733,0,0.137539436597234,0,0,0,1.15424157650247,0.335434687599266,0.0788057072991982,0.262272940674991,0.105600336519406,0,0,0,0.662091970365432,0.25426853765475,0,0,0,0,0.246277562248017,0.170388021785422,0.226624183040251,0,0,1.0342636508924,0.66116300871345,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.976210119215705,1.6274820991845,0,1.10929051536852,0.558867626472451,0.415045904808692,0,0,0.856396000634902,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0.453411851024545,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0.511577485214607,0.107824811396682,0,0.218419276384028,0.33946505990805,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0,0.899209151350433,0,1.59633859057151,1.64093091392604,1.00828678488687,2.55881834117606,1.13032951942296,0,0,0.235939446695481,0,0.115525666150338,0,0,0,0.0752103283492573,0.20170506870352,0.781514011233092,0,0,0,2.09366512317023,0.781078098613847,2.27355476151302,1.71222687523548,1.09394961803644,0,0,0,0,0.535701835878287,1.00885116665647,0.606965604236632,0,0,0,0,0.679697329768317,1.97318320688547,0.236387681767936,0.111231401892069,0,0.471346769748006,0,0,0,0.47775168788705,0.142953088353313,0.632054446930906,0.116241425368125,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0.198950775161368,0.475680363110274,0,0.219881033490858,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0.473314686579554,2.71965960763659,0,0,0,0,0,0,0.327796715891087,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@uc010egm.1 | |short_description=p2@uc010egm.1 | ||
}} | }} |
Latest revision as of 07:31, 26 July 2015
Short description: | p2@uc010egm.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc010egm.1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -81bp_to_uc010egm.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data