FFCP PHASE1:Hg19::chr19:9964743..9964754,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:9964743..9964754,- | |||
|coexpression_cluster_id=C1245 | |||
|description=CAGE_peak_at_chr19:9964743..9964754,- | |description=CAGE_peak_at_chr19:9964743..9964754,- | ||
|id=chr19:9964743..9964754,- | |id=chr19:9964743..9964754,- | ||
|ontology_enrichment_celltype=CL:0000540!4.08e-08!6;CL:0000031!4.08e-08!6;CL:0000404!4.08e-08!6;CL:0000136!4.18e-08!15;CL:0000047!7.29e-08!8 | |ontology_enrichment_celltype=CL:0000540!4.08e-08!6;CL:0000031!4.08e-08!6;CL:0000404!4.08e-08!6;CL:0000136!4.18e-08!15;CL:0000047!7.29e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;5.69e-15;6!CL:0000404;5.69e-15;6!CL:0000136;8.13e-10;13!CL:0002319;7.06e-09;25!CL:0002605;7.18e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.64e-17,8;CL:0000540,8.77e-15,6;CL:0000031,8.77e-15,6;CL:0000404,8.77e-15,6;CL:0002319,9.35e-09,25;CL:0000136,2.04e-08,15;CL:0002605,1.02e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;5.69e-15;6!UBERON:0006215;7.18e-08;3!UBERON:0003099;5.42e-07;1!UBERON:0003852;5.42e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2513,9.48e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.29e-27!82;UBERON:0000073!2.71e-27!94;UBERON:0001016!2.71e-27!94;UBERON:0005743!1.94e-26!86;UBERON:0001049!3.83e-23!57;UBERON:0005068!3.83e-23!57;UBERON:0006241!3.83e-23!57;UBERON:0007135!3.83e-23!57;UBERON:0003080!5.01e-20!42;UBERON:0000955!8.98e-20!69;UBERON:0006238!8.98e-20!69;UBERON:0002346!1.91e-19!90;UBERON:0002616!3.41e-19!59;UBERON:0002780!3.93e-19!41;UBERON:0001890!3.93e-19!41;UBERON:0006240!3.93e-19!41;UBERON:0000924!2.87e-18!173;UBERON:0006601!2.87e-18!173;UBERON:0001869!9.75e-17!32;UBERON:0001893!1.45e-16!34;UBERON:0003075!1.83e-16!86;UBERON:0007284!1.83e-16!86;UBERON:0004121!7.24e-16!169;UBERON:0002791!7.96e-16!33;UBERON:0002020!1.84e-15!34;UBERON:0003528!1.84e-15!34;UBERON:0007023!1.84e-13!115;UBERON:0000956!2.31e-13!25;UBERON:0000203!2.31e-13!25;UBERON:0003056!3.98e-13!61;UBERON:0000153!1.99e-11!129;UBERON:0007811!1.99e-11!129;UBERON:0002619!8.85e-11!22;UBERON:0000033!2.26e-10!123;UBERON:0001950!5.04e-09!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.81e-09;25!UBERON:0000203;3.81e-09;25!UBERON:0002791;9.08e-09;32!UBERON:0001869;9.90e-09;32!UBERON:0003528;6.83e-08;34!UBERON:0002020;6.83e-08;34!UBERON:0001893;2.14e-07;34!UBERON:0005705;5.42e-07;1!UBERON:0008193;5.42e-07;1!UBERON:0010912;5.42e-07;1!UBERON:0002514;5.42e-07;1!UBERON:0003457;5.42e-07;1!UBERON:0008907;5.42e-07;1!UBERON:0008001;5.42e-07;1!UBERON:0007213;5.42e-07;1!UBERON:0009891;5.42e-07;1!UBERON:0007914;5.42e-07;1!UBERON:0007375;5.42e-07;1!UBERON:0003323;5.42e-07;1!UBERON:0010258;5.42e-07;1!UBERON:0005253;5.42e-07;1!UBERON:0007842;5.42e-07;1!UBERON:0002397;5.42e-07;1!UBERON:0003113;5.42e-07;1!UBERON:0003277;5.42e-07;1!UBERON:0001709;5.42e-07;1!UBERON:0002244;5.42e-07;1!UBERON:0005620;5.42e-07;1!UBERON:0010364;5.42e-07;1!UBERON:0004288;5.42e-07;1!UBERON:0002780;8.60e-07;41!UBERON:0001890;8.60e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.57e-15,81;UBERON:0001016,9.48e-15,89;UBERON:0005253,8.06e-12,2;UBERON:0000073,9.13e-10,53;UBERON:0002616,9.13e-10,53;UBERON:0001049,3.83e-09,56;UBERON:0005068,3.83e-09,56;UBERON:0006241,3.83e-09,56;UBERON:0007135,3.83e-09,56;UBERON:0000956,4.24e-09,25;UBERON:0000203,4.24e-09,25;UBERON:0002791,4.53e-09,32;UBERON:0001869,4.53e-09,32;UBERON:0004121,6.42e-09,171;UBERON:0000924,6.42e-09,171;UBERON:0006601,6.42e-09,171;UBERON:0002780,9.83e-09,41;UBERON:0001890,9.83e-09,41;UBERON:0003080,9.83e-09,41;UBERON:0006240,9.83e-09,41;UBERON:0000955,1.43e-08,68;UBERON:0006238,1.43e-08,68;UBERON:0003528,1.75e-08,34;UBERON:0002020,1.75e-08,34;UBERON:0001893,1.75e-08,34;UBERON:0002346,9.92e-08,86;UBERON:0005705,5.43e-07,1;UBERON:0008193,5.43e-07,1;UBERON:0010912,5.43e-07,1;UBERON:0002514,5.43e-07,1;UBERON:0003457,5.43e-07,1;UBERON:0008907,5.43e-07,1;UBERON:0008001,5.43e-07,1;UBERON:0007213,5.43e-07,1;UBERON:0009891,5.43e-07,1;UBERON:0007914,5.43e-07,1;UBERON:0009292,5.43e-07,1;UBERON:0003099,5.43e-07,1;UBERON:0007375,5.43e-07,1;UBERON:0003323,5.43e-07,1;UBERON:0010258,5.43e-07,1;UBERON:0007842,5.43e-07,1;UBERON:0009494,5.43e-07,1;UBERON:0010042,5.43e-07,1;UBERON:0010045,5.43e-07,1;UBERON:0010259,5.43e-07,1;UBERON:0010359,5.43e-07,1;UBERON:0009526,5.43e-07,1;UBERON:0002397,5.43e-07,1;UBERON:0003113,5.43e-07,1;UBERON:0003277,5.43e-07,1;UBERON:0001709,5.43e-07,1;UBERON:0004066,5.43e-07,1;UBERON:0002244,5.43e-07,1;UBERON:0005620,5.43e-07,1;UBERON:0004362,5.43e-07,1;UBERON:0010364,5.43e-07,1;UBERON:0010046,5.43e-07,1;UBERON:0005868,5.43e-07,1;UBERON:0007238,5.43e-07,1;UBERON:0004288,5.43e-07,1;UBERON:0004068,5.43e-07,1;UBERON:0010334,5.43e-07,1;UBERON:0003852,5.43e-07,1;UBERON:0010253,5.43e-07,1;UBERON:0003075,7.28e-07,82;UBERON:0007284,7.28e-07,82 | |||
|phase1_expression=0.908391896352783,1.71280419112787,0.140954404095971,0,1.78784437770915,0,0,1.26343974685366,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43117993565528,0.273748850145768,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0.270803863765016,0.25618263945135,0,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,3.00802746381534,0.144846518960824,0.795285947051099,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0.427114777637135,0.847727604638247,0,0,0,0.18611685633159,0,0,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0,0,0,0,0.731842236777572,0.265059536642971,0.464775771478074,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44585807502342,0,0,0,0,0,0,0,0,1.52456774533478,0,3.09315525111078,1.00509759200609,4.46557126157214,0,0,0,0,0,0,0.623912584592421,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,1.37257369524342,0,0,0.106727557803444,0,0,0,0.744323423456331,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0.532685175939381,0,0,0.116210378459959,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.27470839445503,0,0.574265537996172,0.650060246036521,0,1.64340221096607,0,0,0.137836572484531,0,0,0,1.69160867728801,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.242721043499027,0,0,0,0,0,1.9882952955326,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,1.86623752597084,0,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,3.99227596002388,0,0.0874599999961957,0.724999575434793,0.1137934482855,0,0,0,0.291604613383254,0.347249989866585,1.77148277162768,0.241192877250816,1.52581736317083,0.221158519862449,1.77328571372128,0.438770794307945,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0.802577647298789,0.468528891450678,0,0.19566461893209,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.416024019039416,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0.160317640503067,0,0,0,0.458146384663663,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,1.59045937961861,0.544813624446302,0.321506296930038,0.687697182986169,2.49264202817511,1.349843349309,0.77380195455795,0.425246896606173,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0.293104467356165,0,0.904980694530854,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0.7520696820681,0,1.31149052283922,0,0,0.976210119215705,0.250381861413,0.573409195690071,0,0.310482014706917,0.138348634936231,0,0,1.42732666772484,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0.132864840313363,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0,0.848662649770126,4.25149840203366,0.619678821295011,1.11728983594649,0,0,0,3.17408349321616,0,0.321146125482298,0,0,1.02558182120378,3.02486035466062,0.345786262321089,1.45328081068666,0,0,0.11796972334774,0,0,0,0,1.5913297769302,0,0.60511520611056,0,0,0,0,0.337687923091973,0,0.206686796501184,0.253663240775627,3.28184885410932,0,0,0.703484977438482,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.135939465953663,0.263091094251396,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0.47404083519818,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.335566295393377,0,0.365753774946808,0,0,0,0.971421986118279,0,0,0.118920090777569,0,0,0,0,0.437119121007915,0,0,0,0.392616934229891,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.679914901909147,2.61810414204226,0,0,0,0.432626562123789,0,0,0,0.407955318967927,0,0,0.250707539292375,0.227336094654718,0,2.48750831837634,0.103432995861895,0.213233981900981,0.23806443146374,0.258355639344024,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0,0,0.332660356546013,0,0,1.9307228228694,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0.908391896352783,1.71280419112787,0.140954404095971,0,1.78784437770915,0,0,1.26343974685366,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43117993565528,0.273748850145768,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0.270803863765016,0.25618263945135,0,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,3.00802746381534,0.144846518960824,0.795285947051099,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0.427114777637135,0.847727604638247,0,0,0,0.18611685633159,0,0,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0,0,0,0,0.731842236777572,0.265059536642971,0.464775771478074,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44585807502342,0,0,0,0,0,0,0,0,1.52456774533478,0,3.09315525111078,1.00509759200609,4.46557126157214,0,0,0,0,0,0,0.623912584592421,0,0,0,0,0,0,0,0,0.260650843404249,0.195801157462741,1.37257369524342,0,0,0.106727557803444,0,0,0,0.744323423456331,0.153461973288062,0,0.256278298511402,0,0.160853921143607,0,0,0.532685175939381,0,0,0.116210378459959,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.27470839445503,0,0.574265537996172,0.650060246036521,0,1.64340221096607,0,0,0.137836572484531,0,0,0,1.69160867728801,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.282431402330337,0,0,0.443430153536676,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.242721043499027,0,0,0,0,0,1.9882952955326,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,1.86623752597084,0,0.179021174675609,0,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,3.99227596002388,0,0.0874599999961957,0.724999575434793,0.1137934482855,0,0,0,0.291604613383254,0.347249989866585,1.77148277162768,0.241192877250816,1.52581736317083,0.221158519862449,1.77328571372128,0.438770794307945,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0.802577647298789,0.468528891450678,0,0.19566461893209,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.416024019039416,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0,0.160317640503067,0,0,0,0.458146384663663,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,1.59045937961861,0.544813624446302,0.321506296930038,0.687697182986169,2.49264202817511,1.349843349309,0.77380195455795,0.425246896606173,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0.293104467356165,0,0.904980694530854,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0.7520696820681,0,1.31149052283922,0,0,0.976210119215705,0.250381861413,0.573409195690071,0,0.310482014706917,0.138348634936231,0,0,1.42732666772484,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0.132864840313363,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0,0.848662649770126,4.25149840203366,0.619678821295011,1.11728983594649,0,0,0,3.17408349321616,0,0.321146125482298,0,0,1.02558182120378,3.02486035466062,0.345786262321089,1.45328081068666,0,0,0.11796972334774,0,0,0,0,1.5913297769302,0,0.60511520611056,0,0,0,0,0.337687923091973,0,0.206686796501184,0.253663240775627,3.28184885410932,0,0,0.703484977438482,0,0.535701835878287,0,0.606965604236632,0,0,0,0,0.135939465953663,0.263091094251396,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0.47404083519818,0,0.173858272302579,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.335566295393377,0,0.365753774946808,0,0,0,0.971421986118279,0,0,0.118920090777569,0,0,0,0,0.437119121007915,0,0,0,0.392616934229891,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.679914901909147,2.61810414204226,0,0,0,0.432626562123789,0,0,0,0.407955318967927,0,0,0.250707539292375,0.227336094654718,0,2.48750831837634,0.103432995861895,0.213233981900981,0.23806443146374,0.258355639344024,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0,0,0.332660356546013,0,0,1.9307228228694,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr19:9964743..9964754,- | |short_description=p@chr19:9964743..9964754,- | ||
}} | }} |
Latest revision as of 18:50, 27 July 2015
Short description: | p@chr19:9964743..9964754, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:9964743..9964754, - |
Coexpression cluster: | C1245_normal_Neurons_parietal_temporal_neuroectodermal_occipital_basal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.64e-17 | 8 |
neuron | 8.77e-15 | 6 |
neuroblast | 8.77e-15 | 6 |
electrically signaling cell | 8.77e-15 | 6 |
neural cell | 9.35e-09 | 25 |
fat cell | 2.04e-08 | 15 |
astrocyte of the cerebral cortex | 1.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 9.48e-07 | 1 |