FFCP PHASE1:Hg19::chr12:20848257..20848271,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:20848257..20848271,+
|short_description=p7@SLCO1C1
|description=CAGE_peak_7_at_SLCO1C1_5end
|association_with_transcript=-17bp_to_ENST00000534996,ENST0000...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=53919 | |EntrezGene=53919 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13819 | |HGNC=13819 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JPA4,B7Z3Q3,Q9NYB5,B7Z8P1 | |UniProt=Q5JPA4,B7Z3Q3,Q9NYB5,B7Z8P1 | ||
|association_with_transcript=-17bp_to_ENST00000534996,ENST00000545604,NM_001145945,NM_001145946,uc001rej.3,uc009zip.2,uc010sii.1,uc010sij.1_5end | |||
|cluster_id=chr12:20848257..20848271,+ | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_7_at_SLCO1C1_5end | |||
|id=chr12:20848257..20848271,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.60e-12;1!UBERON:0010122;5.89e-07;2!UBERON:0006601;7.96e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.15e-60!115;UBERON:0001049!1.04e-59!57;UBERON:0005068!1.04e-59!57;UBERON:0006241!1.04e-59!57;UBERON:0007135!1.04e-59!57;UBERON:0002780!3.34e-52!41;UBERON:0001890!3.34e-52!41;UBERON:0006240!3.34e-52!41;UBERON:0002616!2.19e-51!59;UBERON:0003080!9.76e-51!42;UBERON:0001017!4.62e-50!82;UBERON:0005743!1.28e-49!86;UBERON:0000073!9.76e-46!94;UBERON:0001016!9.76e-46!94;UBERON:0002346!1.19e-45!90;UBERON:0000955!5.88e-44!69;UBERON:0006238!5.88e-44!69;UBERON:0003075!1.67e-43!86;UBERON:0007284!1.67e-43!86;UBERON:0001893!7.27e-42!34;UBERON:0002020!8.04e-42!34;UBERON:0003528!8.04e-42!34;UBERON:0002791!4.95e-40!33;UBERON:0001869!5.30e-38!32;UBERON:0003056!2.42e-34!61;UBERON:0000153!1.65e-29!129;UBERON:0007811!1.65e-29!129;UBERON:0000956!6.67e-28!25;UBERON:0000203!6.67e-28!25;UBERON:0000924!1.02e-26!173;UBERON:0006601!1.02e-26!173;UBERON:0000033!3.80e-26!123;UBERON:0002619!6.97e-26!22;UBERON:0004121!6.00e-25!169;UBERON:0001950!2.99e-22!20;UBERON:0002308!1.43e-15!9;UBERON:0000125!1.43e-15!9;UBERON:0000025!3.22e-15!194;UBERON:0002298!1.49e-13!8;UBERON:0004111!4.47e-13!241;UBERON:0000477!1.42e-12!286;UBERON:0002420!7.66e-12!9;UBERON:0007245!7.66e-12!9;UBERON:0010009!7.66e-12!9;UBERON:0010011!7.66e-12!9;UBERON:0000454!7.66e-12!9;UBERON:0009663!7.94e-12!7;UBERON:0001894!1.29e-11!7;UBERON:0006222!1.29e-11!7;UBERON:0000483!1.41e-10!309;UBERON:0003076!1.62e-10!15;UBERON:0003057!1.62e-10!15;UBERON:0000119!2.47e-10!312;UBERON:0000064!3.51e-10!219;UBERON:0000369!9.44e-10!4;UBERON:0002435!9.44e-10!4;UBERON:0000204!9.44e-10!4;UBERON:0010082!9.44e-10!4;UBERON:0001871!2.05e-09!7;UBERON:0000475!3.31e-09!365;UBERON:0000200!3.50e-09!6;UBERON:0004733!2.87e-08!12;UBERON:0002028!2.87e-08!12;UBERON:0007277!2.87e-08!12;UBERON:0001896!3.49e-08!3;UBERON:0005290!3.49e-08!3;UBERON:0010096!3.49e-08!3;UBERON:0005383!1.08e-07!3;UBERON:0005382!1.08e-07!3;UBERON:0000481!1.28e-07!347;UBERON:0004732!1.54e-07!13;UBERON:0006331!1.80e-07!3;UBERON:0002771!2.05e-07!3;UBERON:0000349!2.15e-07!5;UBERON:0000988!3.59e-07!3;UBERON:0001872!5.44e-07!5;UBERON:0002021!7.89e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;8.43e-34;3!UBERON:0005290;8.43e-34;3!UBERON:0002298;2.96e-17;6!UBERON:0001894;1.10e-14;7!UBERON:0000073;7.19e-13;53!UBERON:0002616;7.19e-13;53!UBERON:0002346;1.86e-12;4!UBERON:0000923;1.86e-12;4!UBERON:0010316;1.86e-12;4!UBERON:0005291;1.86e-12;4!UBERON:0002079;2.60e-12;1!UBERON:0003296;6.37e-12;4!UBERON:0010133;6.37e-12;4!UBERON:0002784;6.37e-12;4!UBERON:0002050;3.80e-10;5!UBERON:0005423;3.80e-10;5!UBERON:0000955;7.13e-10;68!UBERON:0004733;6.51e-09;12!UBERON:0002028;6.51e-09;12!UBERON:0002780;9.95e-09;41!UBERON:0001890;9.95e-09;41!UBERON:0004732;2.89e-08;13!UBERON:0000200;3.02e-08;6!UBERON:0001017;2.45e-07;75!UBERON:0009663;2.77e-07;7!UBERON:0001873;5.89e-07;2!UBERON:0002771;8.76e-07;2!UBERON:0001897;8.76e-07;2!UBERON:0001905;8.76e-07;2!UBERON:0000007;8.76e-07;2!UBERON:0002702;8.76e-07;2!UBERON:0001875;8.76e-07;2!UBERON:0002757;8.76e-07;2!UBERON:0010134;8.76e-07;2!UBERON:0002081;8.76e-07;2!UBERON:0005408;8.76e-07;2!UBERON:0006514;8.76e-07;2!UBERON:0010225;8.76e-07;2!UBERON:0001899;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.48e-33,3;UBERON:0005290,1.48e-33,3;UBERON:0010096,1.48e-33,3;UBERON:0002346,8.88e-20,86;UBERON:0000073,4.11e-19,53;UBERON:0002616,4.11e-19,53;UBERON:0001049,4.86e-18,56;UBERON:0005068,4.86e-18,56;UBERON:0006241,4.86e-18,56;UBERON:0007135,4.86e-18,56;UBERON:0002298,3.91e-17,6;UBERON:0001894,8.91e-15,7;UBERON:0006222,8.91e-15,7;UBERON:0003075,1.28e-14,82;UBERON:0007284,1.28e-14,82;UBERON:0001017,1.56e-14,81;UBERON:0000955,1.89e-14,68;UBERON:0006238,1.89e-14,68;UBERON:0001016,5.77e-13,89;UBERON:0002079,2.20e-12,1;UBERON:0002780,2.78e-12,41;UBERON:0001890,2.78e-12,41;UBERON:0003080,2.78e-12,41;UBERON:0006240,2.78e-12,41;UBERON:0003296,6.03e-12,4;UBERON:0010133,6.03e-12,4;UBERON:0002784,6.73e-12,4;UBERON:0010371,3.08e-11,104;UBERON:0003056,1.42e-10,61;UBERON:0004121,1.57e-10,171;UBERON:0000924,1.57e-10,171;UBERON:0006601,1.57e-10,171;UBERON:0010314,2.75e-10,132;UBERON:0007023,3.17e-10,114;UBERON:0004733,7.46e-09,12;UBERON:0002028,7.46e-09,12;UBERON:0007277,7.46e-09,12;UBERON:0000200,2.71e-08,6;UBERON:0004732,3.27e-08,13;UBERON:0009663,2.45e-07,7;UBERON:0003076,3.50e-07,15;UBERON:0003057,3.50e-07,15;UBERON:0001873,6.07e-07,2;UBERON:0010122,6.07e-07,2;UBERON:0000007,6.42e-07,2;UBERON:0001875,6.80e-07,2;UBERON:0006514,6.80e-07,2;UBERON:0001897,7.20e-07,2;UBERON:0010225,7.20e-07,2;UBERON:0002702,7.61e-07,2;UBERON:0002081,8.06e-07,2;UBERON:0010227,8.06e-07,2;UBERON:0002771,8.52e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,1.00509759200609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0.874813840149763,0,0.885741385813839,2.05013945663194,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.808813595768125,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0.137539436597234,0,0,0,0.668245123238271,0,0,0.157363764404994,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.92562821219883,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,2.1760712134779,0.5013797880454,0.612691153526923,1.31149052283922,0,0,0.122026264901963,1.502291168478,4.58727356552057,1.22021956690538,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92337502664816,0.558644917973244,0,0,0,0,0,0.899209151350433,0,0.319267718114302,0.82046545696302,0.252071696221718,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0.781078098613847,0.206686796501184,0.443910671357348,0,0,0.496211178389294,20.401064345716,0,0,1.00885116665647,1.82089681270989,0.91064876540519,0,0,0,0.339848664884159,0.526182188502793,0,0,0.078493092850514,0.471346769748006,0,0,0,0,3.35939757630285,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0.874238242015829,0,0.245148321753905,0,0.785233868459781,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.860037498908708,0,0.951880862672806,0,0,0,0,0,0,0.327796715891087,0,0,0,0,0,0.227336094654718,0,1.65833887891756,0.620597975171371,0.213233981900981,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0.808468755832877,0.217716747896961,0.684466602170562,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,1.00509759200609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0.874813840149763,0,0.885741385813839,2.05013945663194,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.808813595768125,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0,0,0,0,0.558564802544508,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0.137539436597234,0,0,0,0.668245123238271,0,0,0.157363764404994,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.92562821219883,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,2.1760712134779,0.5013797880454,0.612691153526923,1.31149052283922,0,0,0.122026264901963,1.502291168478,4.58727356552057,1.22021956690538,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92337502664816,0.558644917973244,0,0,0,0,0,0.899209151350433,0,0.319267718114302,0.82046545696302,0.252071696221718,0.207471757392654,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0.781078098613847,0.206686796501184,0.443910671357348,0,0,0.496211178389294,20.401064345716,0,0,1.00885116665647,1.82089681270989,0.91064876540519,0,0,0,0.339848664884159,0.526182188502793,0,0,0.078493092850514,0.471346769748006,0,0,0,0,3.35939757630285,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0.874238242015829,0,0.245148321753905,0,0.785233868459781,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.860037498908708,0,0.951880862672806,0,0,0,0,0,0,0.327796715891087,0,0,0,0,0,0.227336094654718,0,1.65833887891756,0.620597975171371,0.213233981900981,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0.808468755832877,0.217716747896961,0.684466602170562,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p7@SLCO1C1 | |||
}} | }} |
Latest revision as of 19:04, 17 September 2015
Short description: | p7@SLCO1C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLCO1C1_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -17bp_to_ENST00000534996, ENST00000545604, NM_001145945, NM_001145946, uc001rej.3, uc009zip.2, uc010sii.1, uc010sij.1_5end |
EntrezGene: | SLCO1C1 |
HGNC: | 13819 |
UniProt: | Q5JPA4B7Z3Q3Q9NYB5B7Z8P1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data