FFCP PHASE1:Hg19::chr5:146889619..146889639,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1809 | |EntrezGene=1809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3015 | |HGNC=3015 | ||
|TSSclassifier=strong | |||
|UniProt=B3SXQ8,Q14195,Q6DEN2 | |UniProt=B3SXQ8,Q14195,Q6DEN2 | ||
|association_with_transcript=0bp_to_ENST00000343218,NM_001197294_5end | |association_with_transcript=0bp_to_ENST00000343218,NM_001197294_5end | ||
|cluster_id=chr5:146889619..146889639,- | |||
|coexpression_cluster_id=C1527 | |||
|description=CAGE_peak_3_at_DPYSL3_5end | |description=CAGE_peak_3_at_DPYSL3_5end | ||
|id=chr5:146889619..146889639,- | |id=chr5:146889619..146889639,- | ||
|ontology_enrichment_celltype=CL:0000055!6.12e-38!180;CL:0000222!4.46e-19!119;CL:0000393!7.39e-19!60;CL:0000211!7.39e-19!60;CL:0000192!1.73e-18!42;CL:0000514!1.73e-18!42;CL:0000183!1.82e-18!59;CL:0000359!5.33e-18!32;CL:0000187!7.07e-18!54;CL:0000680!5.72e-17!57;CL:0000056!5.72e-17!57;CL:0000355!5.72e-17!57;CL:0000057!2.86e-15!75;CL:0000220!4.41e-13!246;CL:0002321!5.05e-13!248;CL:0002494!1.01e-08!16;CL:0002319!4.31e-08!25;CL:0002539!2.15e-07!10;CL:0000133!3.34e-07!59 | |ontology_enrichment_celltype=CL:0000055!6.12e-38!180;CL:0000222!4.46e-19!119;CL:0000393!7.39e-19!60;CL:0000211!7.39e-19!60;CL:0000192!1.73e-18!42;CL:0000514!1.73e-18!42;CL:0000183!1.82e-18!59;CL:0000359!5.33e-18!32;CL:0000187!7.07e-18!54;CL:0000680!5.72e-17!57;CL:0000056!5.72e-17!57;CL:0000355!5.72e-17!57;CL:0000057!2.86e-15!75;CL:0000220!4.41e-13!246;CL:0002321!5.05e-13!248;CL:0002494!1.01e-08!16;CL:0002319!4.31e-08!25;CL:0002539!2.15e-07!10;CL:0000133!3.34e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.87e-18;32!CL:0000192;3.32e-14;43!CL:0000187;1.07e-09;55!CL:0000393;1.26e-09;61!CL:0000211;1.26e-09;61!CL:0002494;3.64e-09;16!CL:0002319;2.20e-08;25!CL:0002539;9.33e-08;10!CL:0000134;2.02e-07;55!CL:0000048;2.13e-07;58!CL:0000243;7.64e-07;15!CL:0000125;7.64e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.15e-19,43;CL:0000514,2.15e-19,43;CL:0000393,3.36e-19,61;CL:0000211,3.36e-19,61;CL:0000359,5.24e-19,32;CL:0000187,3.89e-18,55;CL:0000222,6.70e-18,121;CL:0000680,7.71e-17,58;CL:0000056,7.71e-17,58;CL:0000355,7.71e-17,58;CL:0000057,1.02e-15,76;CL:0002321,2.88e-11,250;CL:0002494,3.66e-09,16;CL:0002319,1.71e-08,25;CL:0002539,9.43e-08,10;CL:0000133,3.91e-07,59;CL:0000243,6.34e-07,15;CL:0000125,6.34e-07,15;CL:0000030,6.34e-07,15;CL:0000339,6.34e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;3.32e-14;43!CL:0000355;8.51e-09;58!CL:0000339;7.64e-07;15 | |||
|ontology_enrichment_disease=DOID:2394!3.59e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.15e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.18e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!8.67e-29!84;UBERON:0002049!1.29e-25!79;UBERON:0007798!1.29e-25!79;UBERON:0001981!2.88e-25!60;UBERON:0007500!2.88e-25!60;UBERON:0004537!2.88e-25!60;UBERON:0006965!2.88e-25!60;UBERON:0003914!5.10e-24!118;UBERON:0001637!2.80e-23!42;UBERON:0003509!2.80e-23!42;UBERON:0004572!2.80e-23!42;UBERON:0000055!8.10e-22!69;UBERON:0004535!4.97e-21!110;UBERON:0000119!6.04e-21!312;UBERON:0000483!6.68e-21!309;UBERON:0001009!1.80e-20!113;UBERON:0000477!4.50e-20!286;UBERON:0000025!1.59e-19!194;UBERON:0004111!1.95e-19!241;UBERON:0004573!5.71e-19!33;UBERON:0004571!5.71e-19!33;UBERON:0000468!3.03e-18!659;UBERON:0000475!4.91e-18!365;UBERON:0000914!2.46e-17!83;UBERON:0002329!2.46e-17!83;UBERON:0003077!2.46e-17!83;UBERON:0003059!2.46e-17!83;UBERON:0007282!2.46e-17!83;UBERON:0009618!2.46e-17!83;UBERON:0007285!2.46e-17!83;UBERON:0004290!5.98e-17!70;UBERON:0002385!1.09e-16!63;UBERON:0001015!1.09e-16!63;UBERON:0000383!1.09e-16!63;UBERON:0005256!1.71e-16!143;UBERON:0000467!2.07e-16!625;UBERON:0001134!2.10e-16!61;UBERON:0002036!2.10e-16!61;UBERON:0003082!2.10e-16!61;UBERON:0000481!2.72e-16!347;UBERON:0000480!3.91e-16!626;UBERON:0000490!6.02e-15!138;UBERON:0000486!1.97e-14!82;UBERON:0000922!5.58e-13!612;UBERON:0000947!3.19e-12!21;UBERON:0010191!3.19e-12!21;UBERON:0002050!3.77e-12!605;UBERON:0005423!3.77e-12!605;UBERON:0000923!6.57e-12!604;UBERON:0005291!6.57e-12!604;UBERON:0006598!6.57e-12!604;UBERON:0002532!6.57e-12!604;UBERON:0000948!6.04e-10!24;UBERON:0005498!6.04e-10!24;UBERON:0004140!6.04e-10!24;UBERON:0009881!6.04e-10!24;UBERON:0004141!6.04e-10!24;UBERON:0003084!6.04e-10!24;UBERON:0007005!6.04e-10!24;UBERON:0004139!6.04e-10!24;UBERON:0004291!6.04e-10!24;UBERON:0002100!1.07e-09!216;UBERON:0007100!6.63e-09!27;UBERON:0004121!3.15e-08!169;UBERON:0003103!3.32e-08!69;UBERON:0003104!5.19e-08!238;UBERON:0009142!5.19e-08!238;UBERON:0001135!8.27e-08!15;UBERON:0000924!1.92e-07!173;UBERON:0006601!1.92e-07!173;UBERON:0004237!2.15e-07!10;UBERON:0004695!2.15e-07!10;UBERON:0002111!2.15e-07!10;UBERON:0004178!2.15e-07!10;UBERON:0000064!7.22e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.55e-18;33!UBERON:0004571;2.55e-18;33!UBERON:0001637;9.62e-18;42!UBERON:0003509;9.62e-18;42!UBERON:0004572;9.62e-18;42!UBERON:0007500;5.36e-14;56!UBERON:0001981;5.36e-14;56!UBERON:0004537;5.36e-14;56!UBERON:0000947;6.98e-13;21!UBERON:0010191;6.98e-13;21!UBERON:0003914;5.66e-11;74!UBERON:0002049;8.48e-10;75!UBERON:0007798;8.48e-10;75!UBERON:0000055;2.19e-09;65!UBERON:0000948;6.42e-09;22!UBERON:0001135;3.59e-08;15!UBERON:0004237;9.33e-08;10!UBERON:0004695;9.33e-08;10!UBERON:0002111;9.33e-08;10!UBERON:0004178;9.33e-08;10!UBERON:0007100;3.18e-07;25 | |||
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|phase1_expression=0.54503513781167,0.642301571672949,3.10099689011137,0,4.46961094427288,8.72338524100369,0,2.52687949370732,0.522371256399677,9.09215565055583,0.697801167972428,2.18441372130172,2.90143676051299,7.54974753056284,4.63956326019082,39.6671836406547,51.831729410062,39.4367448809182,60.9915998488134,27.9484801834309,19.1760649769598,55.1680309801435,31.1997225972852,57.7610073807571,22.9743030458489,0.0764134057479513,0,0,0,0,0.464448369948228,5.51652734687356,0.6024118375565,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0.344745680736619,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.694892620815,18.7796240717018,11.2519054422307,18.7948359239974,8.02140657017423,15.643424047769,26.2444362526863,19.4653948121054,48.9690352909872,88.6917589850256,81.9498550516866,3.1434978119451,0.728590576585084,2.22470665670658,0,0,0,0,0,0,32.7957972155063,18.9251610923347,28.1183806302151,22.0470097350364,11.7459842138774,7.15306909044175,24.24341611827,0.258416759169329,1.77883131343355,0.33472061276467,4.43112248820062,2.28081631715554,1.46437234528902,12.5005447317595,19.4434067491622,5.89378206674926,6.28682243353275,5.96840846561608,13.7984973719295,5.69559395740877,16.3049552098062,0,0,0.436094052142534,27.3334573432425,42.4212214076342,30.7189299486668,55.0726311837722,60.6482933559191,28.5945576072577,55.5094777794466,29.1067707132249,13.38207452219,13.6057778790385,24.1923616607919,3.63257826347835,4.03323147135999,27.1812860927204,0.936480230490962,6.27519003698894,1.04614076386261,5.04968344168189,2.26622122115384,3.08991774744947,4.08308342509786,6.1417158655884,3.30642499762449,14.2560342873846,22.7485574936272,7.28129089550421,7.90479955997862,6.39677233025452,4.25402967564678,3.87889761677856,7.46261955497424,8.88814607817157,12.3195208303409,31.4207147353258,8.07253360599879,7.04739383101272,6.14602513362729,22.8069233024146,19.6830330845418,7.72921620136887,4.83903826462134,12.1518959213712,8.67189345934668,11.107086066741,6.25939310767636,10.6686397500416,16.6854508482809,11.6872433944063,13.7344079771495,1.73934767846967,2.72746120590835,1.14721838155602,1.09776335516636,2.12047629314376,2.44007280025989,2.59152637538426,5.2987378683882,9.85438869504741,40.6768784057521,19.2972281457866,12.4321429217232,1.39310378409594,0,0.118306800039844,0,0.241011029883482,0.55146986366197,0,0,0,0,1.15424147083917,4.42893272774789,8.41450642820675,42.8036971784656,30.8718293909638,0,0,1.18157981336281,0,0,20.4165694255245,0,0,0,0.277765335475589,12.7065239071027,9.35941306751621,18.7630744632855,68.8626605551956,124.922850666914,0.433099343283221,0.925971025153221,0.951270761172991,0,0,0,0,0,0,2.18376766658517,1.55952606966625,0.626909658919938,0.290633938513962,0.766765358330422,0,0,0.414656231081544,0.288239906833923,0.50496973370552,0.063497894292169,0,0,0,0,0,0,2.24262168690721,3.48768055066624,1.24675085895615,26.2421582988289,0,2.535908257668,20.2112968604502,10.4007436911366,3.34369586540785,0,2.66422179016099,1.57275793023962,1.62786481617433,13.1718453884923,2.93162565864362,1.77695974371273,21.3827005692026,10.8518175741451,16.5591357134056,21.5941660953243,0,0,0,6.70949595376431,5.7430967917057,15.690059554479,0.868687840005475,1.02738161275192,2.14873155887875,0,0,0,0,43.7042753662637,20.8223766172195,14.6924874427762,16.9191427987692,14.0346525363696,0,0,0,2.57652132610194,9.50323990013386,2.71265023699736,0.623912584592421,2.67643483195743,1.10391690523754,3.5142424497814,16.8529815847523,18.1926003244788,1.03473071292505,19.2625423575277,24.3367302475048,8.51459421787212,1.56640925970192,1.02943027143257,0,0,0,3.33440328590885,3.32870879020994,3.0239029332968,2.23297027036899,2.14846762603287,2.80660094433074,4.99742682097234,5.62877973973374,21.715279354387,5.93672265779964,19.2762117253319,17.2234873553733,17.8215928549966,68.0223302230544,11.7372482244559,0,1.20303882181971,0.276242966807689,22.2740029439337,28.2241310410411,5.76947425821466,3.15839729035188,0.693138033939733,9.41219723012226,23.3822759445217,3.27210049567915,1.13733384070897,7.6542167374432,28.5009009254824,6.16909010761157,50.9379302582443,27.0912477881621,3.56826782263054,1.66215201785745,8.2833659247206,0,0,0.256450125116389,1.64007322849853,0,0.618246069886334,1.46511143709349,1.48517099857058,0,0,17.6752322828576,6.09025525240368,1.54048617114644,1.07452572308291,1.92971201478343,0.429680979473094,0.580066775656914,2.47157219506693,6.41030656656509,0.330569830721956,0.960950336825531,0.255225424989168,0.30347334256665,25.5665052113507,30.2219852957414,66.218540665257,57.2942459127525,45.2460125769469,58.2855104690299,58.7477774559426,54.5305818486987,1.48863347743867,15.1862123864988,17.7286080349157,4.86205803491534,3.85145089230528,26.7290728257787,83.2045558611184,5.93579110024939,9.88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| ||
|short_description=p3@DPYSL3 | |short_description=p3@DPYSL3 | ||
}} | }} |
Latest revision as of 22:18, 15 September 2015
Short description: | p3@DPYSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DPYSL3_5end |
Coexpression cluster: | C1527_glioblastoma_Lens_mesothelioma_mesenchymal_granulosa_Ciliary_Smooth |
Association with transcript: | 0bp_to_ENST00000343218, NM_001197294_5end |
EntrezGene: | DPYSL3 |
HGNC: | 3015 |
UniProt: | B3SXQ8Q14195Q6DEN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.15e-19 | 43 |
smooth muscle myoblast | 2.15e-19 | 43 |
electrically responsive cell | 3.36e-19 | 61 |
electrically active cell | 3.36e-19 | 61 |
vascular associated smooth muscle cell | 5.24e-19 | 32 |
muscle cell | 3.89e-18 | 55 |
mesodermal cell | 6.70e-18 | 121 |
muscle precursor cell | 7.71e-17 | 58 |
myoblast | 7.71e-17 | 58 |
multi-potent skeletal muscle stem cell | 7.71e-17 | 58 |
fibroblast | 1.02e-15 | 76 |
embryonic cell | 2.88e-11 | 250 |
cardiocyte | 3.66e-09 | 16 |
neural cell | 1.71e-08 | 25 |
aortic smooth muscle cell | 9.43e-08 | 10 |
neurectodermal cell | 3.91e-07 | 59 |
glial cell (sensu Vertebrata) | 6.34e-07 | 15 |
glial cell | 6.34e-07 | 15 |
glioblast | 6.34e-07 | 15 |
glioblast (sensu Vertebrata) | 6.34e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.18e-07 | 14 |