FFCP PHASE1:Hg19::chr12:85306594..85306622,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:85306594..85306622,-
|short_description=p4@SLC6A15
|description=CAGE_peak_4_at_SLC6A15_5end
|association_with_transcript=0bp_to_ENST00000547240,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55117 | |EntrezGene=55117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13621 | |HGNC=13621 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVE6,B7Z2P7,Q8IXG2,Q9NW50,Q9H9F5,Q9H2J7 | |UniProt=F8VVE6,B7Z2P7,Q8IXG2,Q9NW50,Q9H9F5,Q9H2J7 | ||
|association_with_transcript=0bp_to_ENST00000547240,ENST00000551388,NM_001146335,NM_018057,NM_182767,uc001szv.2,uc001szy.2,uc010sul.1_5end | |||
|cluster_id=chr12:85306594..85306622,- | |||
|coexpression_cluster_id=C2246 | |||
|description=CAGE_peak_4_at_SLC6A15_5end | |||
|id=chr12:85306594..85306622,- | |||
|ontology_enrichment_celltype=CL:0000393!3.82e-07!60;CL:0000211!3.82e-07!60;CL:0000221!4.85e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002321;5.29e-07;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.21e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!4.47e-35!173;UBERON:0006601!4.47e-35!173;UBERON:0004121!1.02e-33!169;UBERON:0000073!6.09e-31!94;UBERON:0001016!6.09e-31!94;UBERON:0000033!2.02e-29!123;UBERON:0005743!1.24e-26!86;UBERON:0000153!1.73e-26!129;UBERON:0007811!1.73e-26!129;UBERON:0002616!5.32e-25!59;UBERON:0001017!1.32e-24!82;UBERON:0002346!5.51e-24!90;UBERON:0000955!6.81e-24!69;UBERON:0006238!6.81e-24!69;UBERON:0001049!7.80e-24!57;UBERON:0005068!7.80e-24!57;UBERON:0006241!7.80e-24!57;UBERON:0007135!7.80e-24!57;UBERON:0003056!2.51e-23!61;UBERON:0003075!9.05e-23!86;UBERON:0007284!9.05e-23!86;UBERON:0000475!2.82e-20!365;UBERON:0002780!3.46e-20!41;UBERON:0001890!3.46e-20!41;UBERON:0006240!3.46e-20!41;UBERON:0003080!3.50e-20!42;UBERON:0002020!9.31e-17!34;UBERON:0003528!9.31e-17!34;UBERON:0000119!1.33e-16!312;UBERON:0001893!1.74e-16!34;UBERON:0000483!4.48e-16!309;UBERON:0002791!7.15e-16!33;UBERON:0001869!1.81e-15!32;UBERON:0000481!1.39e-14!347;UBERON:0000922!3.69e-14!612;UBERON:0000064!7.95e-14!219;UBERON:0002619!1.12e-12!22;UBERON:0000923!1.33e-12!604;UBERON:0005291!1.33e-12!604;UBERON:0006598!1.33e-12!604;UBERON:0002532!1.33e-12!604;UBERON:0002050!2.00e-12!605;UBERON:0005423!2.00e-12!605;UBERON:0000956!2.88e-12!25;UBERON:0000203!2.88e-12!25;UBERON:0000468!6.87e-12!659;UBERON:0001950!9.82e-12!20;UBERON:0000467!1.62e-11!625;UBERON:0000480!2.40e-11!626;UBERON:0000477!1.21e-09!286;UBERON:0004111!1.15e-08!241;UBERON:0001444!5.04e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.17e-16;41!UBERON:0001890;1.17e-16;41!UBERON:0000073;5.13e-16;53!UBERON:0002616;5.13e-16;53!UBERON:0002619;1.58e-15;22!UBERON:0003528;1.77e-15;34!UBERON:0002020;1.77e-15;34!UBERON:0001893;3.21e-15;34!UBERON:0001869;6.79e-15;32!UBERON:0002791;6.82e-15;32!UBERON:0001950;3.55e-14;20!UBERON:0000956;8.41e-13;25!UBERON:0000203;8.41e-13;25!UBERON:0000955;1.01e-12;68!UBERON:0001017;2.18e-11;75!UBERON:0001016;3.22e-11;83!UBERON:0000125;2.32e-07;9!UBERON:0002308;2.32e-07;9!UBERON:0000200;6.25e-07;6!UBERON:0004121;8.40e-07;165 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.07e-38,171;UBERON:0000924,2.07e-38,171;UBERON:0006601,2.07e-38,171;UBERON:0001016,2.02e-32,89;UBERON:0010371,2.11e-30,104;UBERON:0002346,1.03e-28,86;UBERON:0000955,3.55e-28,68;UBERON:0006238,3.55e-28,68;UBERON:0001017,1.15e-27,81;UBERON:0001049,2.74e-27,56;UBERON:0005068,2.74e-27,56;UBERON:0006241,2.74e-27,56;UBERON:0007135,2.74e-27,56;UBERON:0000073,3.53e-27,53;UBERON:0002616,3.53e-27,53;UBERON:0003075,6.88e-27,82;UBERON:0007284,6.88e-27,82;UBERON:0003056,2.54e-25,61;UBERON:0002780,3.12e-23,41;UBERON:0001890,3.12e-23,41;UBERON:0003080,3.12e-23,41;UBERON:0006240,3.12e-23,41;UBERON:0003528,1.05e-18,34;UBERON:0002020,1.05e-18,34;UBERON:0010314,2.05e-18,132;UBERON:0001893,2.26e-18,34;UBERON:0002791,4.55e-17,32;UBERON:0001869,4.86e-17,32;UBERON:0002619,1.44e-15,22;UBERON:0011216,4.98e-15,223;UBERON:0000483,8.99e-15,306;UBERON:0000119,1.11e-14,309;UBERON:0001950,2.62e-14,20;UBERON:0000956,7.76e-13,25;UBERON:0000203,7.76e-13,25;UBERON:0000922,2.25e-09,592;UBERON:0000923,1.30e-07,560;UBERON:0010316,1.30e-07,560;UBERON:0005291,1.30e-07,560;UBERON:0006598,1.30e-07,560;UBERON:0010317,1.30e-07,560;UBERON:0002532,1.30e-07,560;UBERON:0000125,1.69e-07,9;UBERON:0002308,1.69e-07,9;UBERON:0002050,1.69e-07,564;UBERON:0004111,5.13e-07,240;UBERON:0000200,5.75e-07,6;UBERON:0005423,8.10e-07,581 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.893922188854576,0,0,2.52687949370732,1.30592814099919,0,0,0.218441372130172,2.11013582582763,1.36142988256051,0.662794751455832,2.01697543935533,2.41077811209591,0,0.487932798790507,0.61560529038394,0,0.313454721478088,0.286235987131057,0.821246550437305,0.376627918784408,0,0,0,0,0,0,0.919421224478927,2.409647350226,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,0,0,0,0,0,0.945348171640679,1.10864698731282,0.614843499851882,0.392937226493138,2.91436230634034,2.59549109949101,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0.516833518338658,0.71153252537342,1.33888245105868,0.805658634218294,0,0.488124115096339,0,0,0,0,0,0,0.949265659568129,0,0,0,2.61656431285521,0,0.633152558322899,1.32409180813219,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.538842688278752,0.490385709340376,0.151357427644931,1.72852777344,4.92075006850973,3.74592092196385,2.85235910772225,2.98897361103602,3.17073146338165,0.809364721840658,0.561803226808994,6.53293348015658,3.93069815397658,9.91927499287348,0,0,0,0.718618141816238,1.34668891163253,0.875829639103749,0.831192346452549,0,0,0,0,0.179389635688862,0,0.423863802319124,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0,0,3.67195621010264,1.63647672354501,2.58124135850103,3.29329006549908,1.72288698817931,3.25343040034651,2.07322110030741,1.51392510525377,2.91981887260664,0,0,0,0.928735856063958,0.721879481669586,0.118306800039844,0.168584690078102,0,0.220587945464788,0.435758888184812,0,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,1.88724591328378,3.73150970389327,2.24803506515239,2.11110842064425,3.24059558054854,1.95484983186195,1.03993478527958,1.44331342025273,0.695582429850461,0.352226082707465,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,1.00789276919316,0.850650583454319,5.28395283946805,2.90633938513962,3.83382679165211,0,0,0,0,0,1.26995788584338,3.4378958300245,3.51652341630141,0,2.46785982487976,0,0.857479297891735,0.784917590417525,0.87192013766656,1.3200891447771,0,0,2.535908257668,0.26593811658487,0,0,0,0.266422179016099,2.14466990487221,0,0,3.58309802723109,0.710783897485092,0,0.602878754119172,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,2.67119219315498,1.61154866915906,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0.637938751653163,0,0,0,0.613457458595699,0,1.89885516589815,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,1.12948698808508,0.391602314925481,0.343143423810856,0,0,0,0,0,0.907170879989041,0,0,0,0.512556597022804,1.53512174720011,0,0,0.925258162815933,0.177561725313127,1.97105174433142,7.78881643775432,0.464841513839837,0,2.20557117333613,2.76242966807689,0.68888668898764,1.82091168006717,1.04899531967539,0.902399225814824,0.385076685522074,0,0,1.26661954671451,0,0.170093705276516,0.215915916102139,0,1.35473218771926,0,0.254876273045038,0,1.56712328305525,0,0,2.82095137628028,1.96808787419823,7.48370307727897,0.721287081534056,1.19040304263846,1.40266149865,2.87132768998086,1.95018073810956,0,3.86682873168488,3.38906957652218,2.91656981979646,2.06754858726796,4.40423003959922,2.17525040871343,4.43178462563725,0.623224249527161,2.31398881505369,2.11409074101617,1.14851441245126,1.71968227454435,0,3.46293581513704,0.6970372701606,0,0,0.869932992075073,0.9266210955196,0.286249773483982,3.34942532423701,1.2655176988749,1.5250415513906,0.767693373934002,0.855877976067841,4.45484547096312,1.56989728039846,1.97859703341646,2.74537029736055,3.65218447271628,0.202182481573316,0,0.842516912477962,1.46290121726877,0,0,0.272999822815972,1.69686518344455,1.13008116620243,1.10273068709225,0,0,0.578775534266688,1.31178950409327,0.405820753925408,0.30982349809975,1.12678241012897,1.00387946542836,0.687743287091848,0,2.83808851256478,0,0,3.79473173765715,2.44954304171488,3.56021817084395,0,1.08890984861323,0.376575203107117,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,5.3908847515827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,0.307160702099232,0.994147647766298,3.93874365949436,3.00533503561846,0,5.70038601945582,0,0,0,0,0,0.933118762985422,0,0,0,0.0986434056369336,0,0,2.90799823828566,4.73117300625441,3.99227596002388,0,0,0.724999575434793,11.0379644836935,0,2.36387681767936,3.44743373241465,16.038253736079,3.29887490373255,1.77148277162768,1.80894657938112,3.05163472634166,7.40881041539205,5.02430952221031,2.85201016300164,1.30726156222788,1.25481369850743,0.384751292518985,0,0.23056390438806,0.628303510868405,0.54323685961004,0.31900115973192,0.549585560411174,2.13213910407454,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0,0,0,0.611030144933625,0.296521128680622,0.741383633679017,0.939797545549098,2.56124305326573,0,3.27970224015475,0,0,0,0,0,1.5303638081524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| ||
|short_description=p4@SLC6A15 | |||
}} | }} |
Latest revision as of 03:38, 25 September 2015
Short description: | p4@SLC6A15 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC6A15_5end |
Coexpression cluster: | C2246_carcinoid_Fibroblast_neuroblastoma_salivary_anaplastic_epitheloid_melanoma |
Association with transcript: | 0bp_to_ENST00000547240, ENST00000551388, NM_001146335, NM_018057, NM_182767, uc001szv.2, uc001szy.2, uc010sul.1_5end |
EntrezGene: | SLC6A15 |
HGNC: | 13621 |
UniProt: | F8VVE6B7Z2P7Q8IXG2Q9NW50Q9H9F5Q9H2J7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data