FFCP PHASE1:Hg19::chr1:92495929..92496002,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:92495929..92496002,- | |||
|description=CAGE_peak_at_chr1:92495929..92496002,- | |description=CAGE_peak_at_chr1:92495929..92496002,- | ||
|id=chr1:92495929..92496002,- | |id=chr1:92495929..92496002,- | ||
|ontology_enrichment_celltype=CL:0000115!1.01e-08!35;CL:0002078!1.05e-07!44;CL:0002139!2.27e-07!24 | |ontology_enrichment_celltype=CL:0000115!1.01e-08!35;CL:0002078!1.05e-07!44;CL:0002139!2.27e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.63e-12;15!CL:1000497;1.11e-10;17!CL:0002518;1.11e-10;17!CL:1000507;3.21e-09;10!CL:1000494;3.21e-09;10!CL:0000115;1.25e-08;36!CL:0002681;1.61e-08;12!CL:0002584;1.61e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.47e-12,15;CL:1000497,1.01e-10,17;CL:0002518,1.01e-10,17;CL:1000507,2.09e-09,10;CL:1000494,2.09e-09,10;CL:0000115,3.13e-09,36;CL:0002681,1.59e-08,12;CL:0002584,1.59e-08,12;CL:0002078,1.74e-08,45;CL:0002139,6.83e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050615;6.72e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,1.02e-07,16 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;2.99e-25;32!UBERON:0001950;1.05e-24;20!UBERON:0002619;2.29e-24;22!UBERON:0002791;8.61e-24;32!UBERON:0000956;5.91e-23;25!UBERON:0000203;5.91e-23;25!UBERON:0001893;1.36e-22;34!UBERON:0003528;3.41e-22;34!UBERON:0002020;3.41e-22;34!UBERON:0002780;1.46e-19;41!UBERON:0001890;1.46e-19;41!UBERON:0000073;6.64e-15;53!UBERON:0002616;6.64e-15;53!UBERON:0006555;1.63e-12;15!UBERON:0004819;1.63e-12;15!UBERON:0001285;1.63e-12;15!UBERON:0007684;1.63e-12;15!UBERON:0000955;2.99e-12;68!UBERON:0002113;1.18e-11;24!UBERON:0011143;1.18e-11;24!UBERON:0001871;2.69e-11;6!UBERON:0001017;3.10e-11;75!UBERON:0000489;2.15e-10;29!UBERON:0000200;5.86e-10;6!UBERON:0006554;6.67e-10;30!UBERON:0001008;6.67e-10;30!UBERON:0000353;7.52e-10;15!UBERON:0001016;9.61e-10;83!UBERON:0004211;3.21e-09;10!UBERON:0009773;3.21e-09;10!UBERON:0001231;3.21e-09;10!UBERON:0004810;3.21e-09;10!UBERON:0001225;1.61e-08;12!UBERON:0008987;1.61e-08;12!UBERON:0000369;5.54e-08;4!UBERON:0002435;5.54e-08;4!UBERON:0000204;5.54e-08;4!UBERON:0002021;5.90e-08;5!UBERON:0001851;5.93e-08;15!UBERON:0002420;7.18e-07;9!UBERON:0007245;7.18e-07;9!UBERON:0010009;7.18e-07;9!UBERON:0010011;7.18e-07;9!UBERON:0000454;7.18e-07;9 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,1.14494394852423,0.273748850145768,0.627713197974014,0,0,0,0,0.767658796194425,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0.647787332037959,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0.34362744548263,0.506039384039006,0,2.60433381542567,0.950452044448374,0.752875595388864,1.15187950038977,0,0.473554504088034,0.821127996921047,0.403213486449465,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,1.51255707462509,0.886917589850256,0.966182642624386,0.523916301990851,0,0,0,0,0,0,0,0,1.78886166630035,0,1.73570250803797,0,0.419499436209906,0.550236083880135,0.208994966536811,2.32575083252396,2.49036383880697,2.67776490211736,1.61131726843659,0.760272105718513,2.4406205754817,2.20597848207521,2.43042584364528,2.05389375053383,0.44905874525234,0.900891843866578,0,1.89853131913626,1.09921046358244,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0,0,0,0.151357427644931,0,0.468642863667593,0.312160076830321,0.570471821544449,0,0.23486899728753,0,0,0,0.61417158655884,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0.487894824518382,0.265059536642971,0.580969714347592,0.829288440122964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0.343135620597051,0.109750285408626,0,0,0.370353780634118,0.651616610620649,0,1.44331342025273,2.20267769452646,0.352226082707465,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.646882724578552,0.385029108839245,0.76228387266739,0,2.31986643833309,1.67516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.206768026122887,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.362578348774867,0.601519410909855,0.0920809889358963,0,0.364182336013434,0.262248829918848,2.70719767744447,1.5403067420883,3.92174884588428,4.38417673959782,2.42768746453614,1.13733384070897,2.2112181685947,1.51141141271498,0,1.08378575017541,0.501689773854853,1.78413391131527,0,2.68649705666614,0,0,2.05160100093111,0.984043937099117,1.62689197332152,0.206082023295445,2.56394501491362,3.38288949674411,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,1.116475108079,0,0.190630193923825,0.767693373934002,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,0.238231775457789,0.411362273086194,1.29694662238543,0.540031437238115,0,10.6824071127473,0,0.735120647943095,0,0.432807638929335,0.355709216742071,0,0,0,0,0.324621940274555,0,0,0,0,0.338583555603207,0,0,0.425846237690326,0,0,0.671028323677248,0.500547425135725,0,0,0,0,0,0,0,0,1.33496573924465,0,0.568272293612826,0,0,0,2.98244294329889,3.09472716103128,0.111308705022906,0,0,0.19924798825107,0,0.503865495708552,6.54519568013791,0,0.311039587661807,1.43789361835723,0,0,0.0986434056369336,0,0,4.84666373047609,3.8034920246359,1.99613798001194,0.520855522170466,0.262379999988587,0,0.341380344856499,2.03402920234213,1.18193840883968,0.344743373241465,0.874813840149763,0,3.54296554325536,4.34147179051469,1.52581736317083,0.552896299656123,1.18219047581419,5.70402032600329,0,0.557694977114413,0.153900517007594,0,0,0,0.869178975376065,0,0,0,0,0,0,0,0,0,0,0,4.21996129056054,0,0.282706142867882,6.05888191277855,0,0.176915129006678,0,0,0,0,0.741412462787447,0,1.1713222286267,0,1.9566461893209,8.25453290415915,0,1.20990716048664,5.50930970934882,0,3.00646838828985,4.25121584728713,1.99396161812156,1.323967823502,0.313932918407225,1.19472429772959,1.70765727617876,0,0.347119476670262,0.0979923974143777,0.34823682632161,0.17472666824203,0.687944129886466,0,0,0,0.678923115418936,5.03059922141551,0.225980740780532,0.411125773940253,0.596143835108969,3.60871536948509,3.12882212375685,0,0,0.999048047910651,1.87317542300338,2.06165873098648,0.686379991447858,0,4.72159635148644,0.707082103850386,0.271808412147228,0.313808538937,0,0.288950589901519,0,0.821432273351958,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,1.00775208730089,0,0,0.0787831823072236,0,0,0.0984274815147488,0,0,1.77064427945048,0.482259445395058,0.137539436597234,0.415440338029185,0,0,4.55621674935185,0,0,0.472091293214983,3.2736104321016,0,1.34340638123612,0,0,0,0,0,0,0,0.246277562248017,0.170388021785422,1.58636928128176,0.146552233678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| ||
|short_description=p@chr1:92495929..92496002,- | |short_description=p@chr1:92495929..92496002,- | ||
}} | }} |
Latest revision as of 11:18, 28 July 2015
Short description: | p@chr1:92495929..92496002, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:92495929..92496002, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.47e-12 | 15 |
kidney cell | 1.01e-10 | 17 |
kidney epithelial cell | 1.01e-10 | 17 |
kidney tubule cell | 2.09e-09 | 10 |
nephron tubule epithelial cell | 2.09e-09 | 10 |
endothelial cell | 3.13e-09 | 36 |
kidney cortical cell | 1.59e-08 | 12 |
renal cortical epithelial cell | 1.59e-08 | 12 |
meso-epithelial cell | 1.74e-08 | 45 |
endothelial cell of vascular tree | 6.83e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 1.02e-07 | 16 |