FFCP PHASE1:Hg19::chr4:41270098..41270123,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:41270098..41270123,+ | |||
|coexpression_cluster_id=C2791 | |||
|description=CAGE_peak_at_chr4:41270098..41270123,+ | |description=CAGE_peak_at_chr4:41270098..41270123,+ | ||
|id=chr4:41270098..41270123,+ | |id=chr4:41270098..41270123,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.00e-23!180;CL:0000222!2.01e-16!119;CL:0000393!5.10e-15!60;CL:0000211!5.10e-15!60;CL:0000183!1.60e-12!59;CL:0000680!3.83e-12!57;CL:0000056!3.83e-12!57;CL:0000355!3.83e-12!57;CL:0000187!1.14e-11!54;CL:0002321!1.78e-11!248;CL:0000192!2.93e-11!42;CL:0000514!2.93e-11!42;CL:0000220!4.31e-11!246;CL:0000359!1.80e-09!32;CL:0000077!1.21e-08!19;CL:0000057!1.33e-07!75;CL:0002319!2.66e-07!25;CL:0000133!3.47e-07!59 | |ontology_enrichment_celltype=CL:0000055!2.00e-23!180;CL:0000222!2.01e-16!119;CL:0000393!5.10e-15!60;CL:0000211!5.10e-15!60;CL:0000183!1.60e-12!59;CL:0000680!3.83e-12!57;CL:0000056!3.83e-12!57;CL:0000355!3.83e-12!57;CL:0000187!1.14e-11!54;CL:0002321!1.78e-11!248;CL:0000192!2.93e-11!42;CL:0000514!2.93e-11!42;CL:0000220!4.31e-11!246;CL:0000359!1.80e-09!32;CL:0000077!1.21e-08!19;CL:0000057!1.33e-07!75;CL:0002319!2.66e-07!25;CL:0000133!3.47e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000077;4.12e-09;19!CL:0000359;8.81e-09;32!CL:0000393;4.93e-08;61!CL:0000211;4.93e-08;61!CL:0002319;1.35e-07;25!CL:0000192;1.65e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.07e-15,61;CL:0000211,3.07e-15,61;CL:0000222,4.64e-14,121;CL:0000680,1.04e-11,58;CL:0000056,1.04e-11,58;CL:0000355,1.04e-11,58;CL:0000187,1.40e-11,55;CL:0000192,1.20e-10,43;CL:0000514,1.20e-10,43;CL:0000359,2.86e-09,32;CL:0000077,3.01e-09,19;CL:0002321,7.72e-09,250;CL:0002319,2.32e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000514;1.65e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!2.55e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.68e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.73e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.15e-20!94;UBERON:0001016!2.15e-20!94;UBERON:0005743!1.51e-19!86;UBERON:0001017!2.93e-19!82;UBERON:0000119!2.02e-18!312;UBERON:0000483!2.50e-18!309;UBERON:0000025!1.92e-16!194;UBERON:0000475!4.88e-15!365;UBERON:0000955!1.43e-14!69;UBERON:0006238!1.43e-14!69;UBERON:0004111!2.18e-13!241;UBERON:0001049!9.08e-13!57;UBERON:0005068!9.08e-13!57;UBERON:0006241!9.08e-13!57;UBERON:0007135!9.08e-13!57;UBERON:0002616!2.45e-12!59;UBERON:0000914!1.07e-11!83;UBERON:0002329!1.07e-11!83;UBERON:0003077!1.07e-11!83;UBERON:0003059!1.07e-11!83;UBERON:0007282!1.07e-11!83;UBERON:0009618!1.07e-11!83;UBERON:0007285!1.07e-11!83;UBERON:0002346!1.49e-11!90;UBERON:0003075!2.26e-11!86;UBERON:0007284!2.26e-11!86;UBERON:0000477!3.08e-11!286;UBERON:0004290!5.67e-11!70;UBERON:0002020!1.01e-10!34;UBERON:0003528!1.01e-10!34;UBERON:0001869!3.26e-10!32;UBERON:0001134!3.67e-10!61;UBERON:0002036!3.67e-10!61;UBERON:0003082!3.67e-10!61;UBERON:0000924!4.47e-10!173;UBERON:0006601!4.47e-10!173;UBERON:0001893!6.63e-10!34;UBERON:0000468!6.98e-10!659;UBERON:0003080!7.73e-10!42;UBERON:0002780!7.96e-10!41;UBERON:0001890!7.96e-10!41;UBERON:0006240!7.96e-10!41;UBERON:0004121!8.04e-10!169;UBERON:0002791!8.43e-10!33;UBERON:0000033!8.90e-10!123;UBERON:0002385!1.01e-09!63;UBERON:0001015!1.01e-09!63;UBERON:0000383!1.01e-09!63;UBERON:0000481!1.14e-09!347;UBERON:0003056!1.99e-09!61;UBERON:0001637!2.21e-09!42;UBERON:0003509!2.21e-09!42;UBERON:0004572!2.21e-09!42;UBERON:0002619!3.91e-09!22;UBERON:0000956!4.98e-09!25;UBERON:0000203!4.98e-09!25;UBERON:0000486!6.83e-09!82;UBERON:0005256!9.83e-09!143;UBERON:0000153!1.29e-08!129;UBERON:0007811!1.29e-08!129;UBERON:0002049!1.41e-08!79;UBERON:0007798!1.41e-08!79;UBERON:0001950!1.44e-08!20;UBERON:0004573!2.50e-08!33;UBERON:0004571!2.50e-08!33;UBERON:0000922!3.87e-08!612;UBERON:0001981!5.56e-08!60;UBERON:0007500!5.56e-08!60;UBERON:0004537!5.56e-08!60;UBERON:0006965!5.56e-08!60;UBERON:0004872!6.36e-08!84;UBERON:0000055!1.43e-07!69;UBERON:0000923!3.11e-07!604;UBERON:0005291!3.11e-07!604;UBERON:0006598!3.11e-07!604;UBERON:0002532!3.11e-07!604;UBERON:0002050!4.53e-07!605;UBERON:0005423!4.53e-07!605 | |ontology_enrichment_uberon=UBERON:0000073!2.15e-20!94;UBERON:0001016!2.15e-20!94;UBERON:0005743!1.51e-19!86;UBERON:0001017!2.93e-19!82;UBERON:0000119!2.02e-18!312;UBERON:0000483!2.50e-18!309;UBERON:0000025!1.92e-16!194;UBERON:0000475!4.88e-15!365;UBERON:0000955!1.43e-14!69;UBERON:0006238!1.43e-14!69;UBERON:0004111!2.18e-13!241;UBERON:0001049!9.08e-13!57;UBERON:0005068!9.08e-13!57;UBERON:0006241!9.08e-13!57;UBERON:0007135!9.08e-13!57;UBERON:0002616!2.45e-12!59;UBERON:0000914!1.07e-11!83;UBERON:0002329!1.07e-11!83;UBERON:0003077!1.07e-11!83;UBERON:0003059!1.07e-11!83;UBERON:0007282!1.07e-11!83;UBERON:0009618!1.07e-11!83;UBERON:0007285!1.07e-11!83;UBERON:0002346!1.49e-11!90;UBERON:0003075!2.26e-11!86;UBERON:0007284!2.26e-11!86;UBERON:0000477!3.08e-11!286;UBERON:0004290!5.67e-11!70;UBERON:0002020!1.01e-10!34;UBERON:0003528!1.01e-10!34;UBERON:0001869!3.26e-10!32;UBERON:0001134!3.67e-10!61;UBERON:0002036!3.67e-10!61;UBERON:0003082!3.67e-10!61;UBERON:0000924!4.47e-10!173;UBERON:0006601!4.47e-10!173;UBERON:0001893!6.63e-10!34;UBERON:0000468!6.98e-10!659;UBERON:0003080!7.73e-10!42;UBERON:0002780!7.96e-10!41;UBERON:0001890!7.96e-10!41;UBERON:0006240!7.96e-10!41;UBERON:0004121!8.04e-10!169;UBERON:0002791!8.43e-10!33;UBERON:0000033!8.90e-10!123;UBERON:0002385!1.01e-09!63;UBERON:0001015!1.01e-09!63;UBERON:0000383!1.01e-09!63;UBERON:0000481!1.14e-09!347;UBERON:0003056!1.99e-09!61;UBERON:0001637!2.21e-09!42;UBERON:0003509!2.21e-09!42;UBERON:0004572!2.21e-09!42;UBERON:0002619!3.91e-09!22;UBERON:0000956!4.98e-09!25;UBERON:0000203!4.98e-09!25;UBERON:0000486!6.83e-09!82;UBERON:0005256!9.83e-09!143;UBERON:0000153!1.29e-08!129;UBERON:0007811!1.29e-08!129;UBERON:0002049!1.41e-08!79;UBERON:0007798!1.41e-08!79;UBERON:0001950!1.44e-08!20;UBERON:0004573!2.50e-08!33;UBERON:0004571!2.50e-08!33;UBERON:0000922!3.87e-08!612;UBERON:0001981!5.56e-08!60;UBERON:0007500!5.56e-08!60;UBERON:0004537!5.56e-08!60;UBERON:0006965!5.56e-08!60;UBERON:0004872!6.36e-08!84;UBERON:0000055!1.43e-07!69;UBERON:0000923!3.11e-07!604;UBERON:0005291!3.11e-07!604;UBERON:0006598!3.11e-07!604;UBERON:0002532!3.11e-07!604;UBERON:0002050!4.53e-07!605;UBERON:0005423!4.53e-07!605 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.70e-10;22!UBERON:0003528;3.37e-10;34!UBERON:0002020;3.37e-10;34!UBERON:0001869;3.54e-10;32!UBERON:0000956;5.19e-10;25!UBERON:0000203;5.19e-10;25!UBERON:0002791;5.80e-10;32!UBERON:0001950;6.86e-10;20!UBERON:0001893;5.82e-09;34!UBERON:0001017;2.88e-07;75!UBERON:0000955;4.24e-07;68!UBERON:0002780;4.47e-07;41!UBERON:0001890;4.47e-07;41 | |||
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| ||
|short_description=p@chr4:41270098..41270123,+ | |short_description=p@chr4:41270098..41270123,+ | ||
}} | }} |
Latest revision as of 05:14, 30 July 2015
Short description: | p@chr4:41270098..41270123, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:41270098..41270123, + |
Coexpression cluster: | C2791_iPS_medial_leiomyoma_smallcell_Neurons_Smooth_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.07e-15 | 61 |
electrically active cell | 3.07e-15 | 61 |
mesodermal cell | 4.64e-14 | 121 |
muscle precursor cell | 1.04e-11 | 58 |
myoblast | 1.04e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.04e-11 | 58 |
muscle cell | 1.40e-11 | 55 |
smooth muscle cell | 1.20e-10 | 43 |
smooth muscle myoblast | 1.20e-10 | 43 |
vascular associated smooth muscle cell | 2.86e-09 | 32 |
mesothelial cell | 3.01e-09 | 19 |
embryonic cell | 7.72e-09 | 250 |
neural cell | 2.32e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.73e-08 | 14 |