FFCP PHASE1:Hg19::chr9:120466447..120466483,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7099 | |EntrezGene=7099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11850 | |HGNC=11850 | ||
|TSSclassifier=strong | |||
|UniProt=D1CS53,O00206 | |UniProt=D1CS53,O00206 | ||
|association_with_transcript=0bp_to_NM_138554,NR_024168,NR_024169,uc004bjz.2,uc004bka.2,uc004bkb.2_5end | |association_with_transcript=0bp_to_NM_138554,NR_024168,NR_024169,uc004bjz.2,uc004bka.2,uc004bkb.2_5end | ||
|cluster_id=chr9:120466447..120466483,+ | |||
|description=CAGE_peak_3_at_TLR4_5end | |description=CAGE_peak_3_at_TLR4_5end | ||
|id=chr9:120466447..120466483,+ | |id=chr9:120466447..120466483,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.09e-15!42;CL:0000860!3.86e-15!45;CL:0000766!3.44e-13!76;CL:0002194!9.93e-11!63;CL:0000576!9.93e-11!63;CL:0000040!9.93e-11!63;CL:0000559!9.93e-11!63;CL:0000839!2.82e-10!70;CL:0002009!6.00e-10!65;CL:0000557!8.59e-10!71;CL:0000136!7.11e-07!15 | |ontology_enrichment_celltype=CL:0002057!1.09e-15!42;CL:0000860!3.86e-15!45;CL:0000766!3.44e-13!76;CL:0002194!9.93e-11!63;CL:0000576!9.93e-11!63;CL:0000040!9.93e-11!63;CL:0000559!9.93e-11!63;CL:0000839!2.82e-10!70;CL:0002009!6.00e-10!65;CL:0000557!8.59e-10!71;CL:0000136!7.11e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.27e-17;33!CL:0002057;3.27e-17;33!CL:0000473;2.89e-13;39!CL:0000234;2.89e-13;39!CL:0000576;1.18e-08;48!CL:0000136;1.10e-07;13!CL:0000766;5.47e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.73e-15,42;CL:0002057,1.73e-15,42;CL:0000473,1.73e-14,48;CL:0000234,1.73e-14,48;CL:0000766,1.63e-11,72;CL:0002194,2.97e-10,59;CL:0000576,2.97e-10,59;CL:0000040,2.97e-10,59;CL:0000559,2.97e-10,59;CL:0002009,2.14e-09,61;CL:0000839,2.74e-09,66;CL:0000557,6.56e-09,67;CL:0000136,1.28e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.57e-36!115;UBERON:0001049!1.35e-20!57;UBERON:0005068!1.35e-20!57;UBERON:0006241!1.35e-20!57;UBERON:0007135!1.35e-20!57;UBERON:0002616!1.16e-19!59;UBERON:0000955!1.74e-19!69;UBERON:0006238!1.74e-19!69;UBERON:0005743!8.15e-18!86;UBERON:0001017!1.11e-17!82;UBERON:0003075!1.58e-17!86;UBERON:0007284!1.58e-17!86;UBERON:0003080!2.92e-15!42;UBERON:0002346!3.94e-15!90;UBERON:0002780!5.94e-15!41;UBERON:0001890!5.94e-15!41;UBERON:0006240!5.94e-15!41;UBERON:0000073!4.02e-14!94;UBERON:0001016!4.02e-14!94;UBERON:0002020!1.69e-13!34;UBERON:0003528!1.69e-13!34;UBERON:0001893!2.53e-13!34;UBERON:0003056!4.69e-13!61;UBERON:0002791!6.86e-13!33;UBERON:0001869!3.28e-12!32;UBERON:0000468!3.31e-12!659;UBERON:0000467!1.99e-11!625;UBERON:0000480!3.32e-11!626;UBERON:0000062!3.53e-11!511;UBERON:0002050!5.33e-11!605;UBERON:0005423!5.33e-11!605;UBERON:0000923!7.53e-11!604;UBERON:0005291!7.53e-11!604;UBERON:0006598!7.53e-11!604;UBERON:0002532!7.53e-11!604;UBERON:0002390!1.22e-10!102;UBERON:0003061!1.22e-10!102;UBERON:0000033!1.93e-10!123;UBERON:0000922!1.99e-10!612;UBERON:0000153!1.21e-09!129;UBERON:0007811!1.21e-09!129;UBERON:0002371!1.93e-09!80;UBERON:0002193!5.30e-09!112;UBERON:0002619!7.99e-09!22;UBERON:0001474!1.08e-08!86;UBERON:0002204!1.55e-08!167;UBERON:0000956!2.02e-08!25;UBERON:0000203!2.02e-08!25;UBERON:0000479!2.69e-08!787;UBERON:0004765!3.09e-08!101;UBERON:0001434!3.09e-08!101;UBERON:0001950!1.25e-07!20;UBERON:0002420!4.18e-07!9;UBERON:0007245!4.18e-07!9;UBERON:0010009!4.18e-07!9;UBERON:0010011!4.18e-07!9;UBERON:0000454!4.18e-07!9;UBERON:0002308!4.79e-07!9;UBERON:0000125!4.79e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!9.57e-36!115;UBERON:0001049!1.35e-20!57;UBERON:0005068!1.35e-20!57;UBERON:0006241!1.35e-20!57;UBERON:0007135!1.35e-20!57;UBERON:0002616!1.16e-19!59;UBERON:0000955!1.74e-19!69;UBERON:0006238!1.74e-19!69;UBERON:0005743!8.15e-18!86;UBERON:0001017!1.11e-17!82;UBERON:0003075!1.58e-17!86;UBERON:0007284!1.58e-17!86;UBERON:0003080!2.92e-15!42;UBERON:0002346!3.94e-15!90;UBERON:0002780!5.94e-15!41;UBERON:0001890!5.94e-15!41;UBERON:0006240!5.94e-15!41;UBERON:0000073!4.02e-14!94;UBERON:0001016!4.02e-14!94;UBERON:0002020!1.69e-13!34;UBERON:0003528!1.69e-13!34;UBERON:0001893!2.53e-13!34;UBERON:0003056!4.69e-13!61;UBERON:0002791!6.86e-13!33;UBERON:0001869!3.28e-12!32;UBERON:0000468!3.31e-12!659;UBERON:0000467!1.99e-11!625;UBERON:0000480!3.32e-11!626;UBERON:0000062!3.53e-11!511;UBERON:0002050!5.33e-11!605;UBERON:0005423!5.33e-11!605;UBERON:0000923!7.53e-11!604;UBERON:0005291!7.53e-11!604;UBERON:0006598!7.53e-11!604;UBERON:0002532!7.53e-11!604;UBERON:0002390!1.22e-10!102;UBERON:0003061!1.22e-10!102;UBERON:0000033!1.93e-10!123;UBERON:0000922!1.99e-10!612;UBERON:0000153!1.21e-09!129;UBERON:0007811!1.21e-09!129;UBERON:0002371!1.93e-09!80;UBERON:0002193!5.30e-09!112;UBERON:0002619!7.99e-09!22;UBERON:0001474!1.08e-08!86;UBERON:0002204!1.55e-08!167;UBERON:0000956!2.02e-08!25;UBERON:0000203!2.02e-08!25;UBERON:0000479!2.69e-08!787;UBERON:0004765!3.09e-08!101;UBERON:0001434!3.09e-08!101;UBERON:0001950!1.25e-07!20;UBERON:0002420!4.18e-07!9;UBERON:0007245!4.18e-07!9;UBERON:0010009!4.18e-07!9;UBERON:0010011!4.18e-07!9;UBERON:0000454!4.18e-07!9;UBERON:0002308!4.79e-07!9;UBERON:0000125!4.79e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.18e-13;34!UBERON:0003528;3.05e-13;34!UBERON:0002020;3.05e-13;34!UBERON:0002791;4.91e-13;32!UBERON:0001869;7.65e-13;32!UBERON:0002780;2.90e-12;41!UBERON:0001890;2.90e-12;41!UBERON:0000073;1.34e-11;53!UBERON:0002616;1.34e-11;53!UBERON:0001017;7.82e-11;75!UBERON:0002619;1.57e-10;22!UBERON:0000955;5.56e-10;68!UBERON:0000956;9.79e-10;25!UBERON:0000203;9.79e-10;25!UBERON:0007023;9.81e-10;114!UBERON:0001950;3.83e-09;20!UBERON:0002420;6.74e-08;9!UBERON:0007245;6.74e-08;9!UBERON:0010009;6.74e-08;9!UBERON:0010011;6.74e-08;9!UBERON:0000454;6.74e-08;9!UBERON:0000125;7.78e-08;9!UBERON:0002308;7.78e-08;9!UBERON:0001016;9.04e-08;83 | |||
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|phase1_expression=14.352591962374,20.7677508174254,15.2230756423649,14.0102617694383,16.5375604938096,13.9574163856059,10.1319951267324,1.26343974685366,3.3954131665979,0,0,0,0,5.07442047136191,5.96515276310248,2.6893005858071,0.602694528023977,0.730310090387373,0,1.23121058076788,1.22400414746552,0.626909442956176,0.286235987131057,2.32686522623903,1.50651167513763,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0.767658796194425,0.928896739896456,0,0,0,0,0,0,2.21598163412751,5.61524452916397,1.95309783644267,1.56740831967947,0.32389366601898,1.03030227053675,4.50734540216651,6.80176698639857,8.9756102639492,13.9457422143411,10.6903650885675,13.6270803193846,22.4400066011277,18.4435708700952,24.1211874486357,35.8535507966083,26.4648720269369,12.1883837934908,7.9061782607894,5.45812300115692,9.21366286224847,28.7718858828648,15.0836642725764,31.327519164153,16.4925650093358,10.7710375115681,10.6556187633174,62.6851955437741,64.6819156147899,94.0461595983318,25.3761151909311,26.5956288394303,25.8454725199089,31.4807741369352,56.3464783060974,70.8875747867581,1.26753171787165,0.637812899895131,0.838634582033504,0.898629049171961,2.10247649978109,1.44653028027372,0.285012743741249,2.18808344918999,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0.947109008176067,0,0,0,0,4.87613732627923,2.01210257911091,0.895037932904712,1.0843174571537,2.00535164254356,0.869079113764942,0,0.486634870302636,3.11964896641424,3.54767035940102,2.3715392137144,3.92937226493138,0,0,0.97364218096405,0.174129737299267,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.417989933073621,0.775250277507987,1.42306505074684,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,0.535798369704479,0.22452937262617,0.225222960966644,0,0,0.183201743930407,23.7204751384914,54.2892369807656,0,1.98788780678127,3.41902381494365,1.45650098894541,6.02356903572509,0.709336764396714,1.12135520028461,0,1.48000529050296,2.8008993185979,0.942974704487816,0.163461903113459,1.66493170409425,1.15235184896,0,2.80944069147288,0,1.04614076386261,0.352303495931295,0,0,2.85815839756851,0,4.54633437173368,0,0.494533858557114,0,0,0,0.500474079487857,1.6623846929051,0.438977620880838,2.75839016219118,1.35214253015937,0.794025282120147,0.538168907066586,0,1.90738711043606,0.600182192168805,1.75189299705346,3.09168648054755,1.30281799432113,0.337552664482532,0.389748020644795,0.757301322732344,1.10459878370759,7.43571861366535,0,0,0.508681776931463,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0.643240938192885,1.38134921352481,21.825292617503,9.38443326170461,0.828147600278907,1.18009283054671,0.482022059766964,0.220587945464788,0.217879444092406,0.949082476444386,1.07865046528132,0.784885860501384,0.769494313892781,0,1.40241773803446,0.8231480226628,0,0,2.94848165003288,5.90789906681404,0,0,3.08822058537346,0,0,0,0,0.325808305310325,0,4.3299402607582,3.13012093432707,5.04857385214033,0.288732895522148,0,0.190254152234598,0,0,1.47730203652438,1.40402559083543,0.891786973732369,0,0,0,4.20925056703387,2.3250715081117,2.30029607499127,21.1845192295256,3.96217953059517,0.621984346622316,1.00883967391873,0.50496973370552,0.444485260045183,0.381988425558278,1.17217447210047,0,1.43958489784653,1.8020583470635,5.14487578735041,0.336393253036082,3.48768055066624,1.6134422880609,0.904902010304444,17.8828222925941,1.690605505112,2.6593811658487,4.16029747645464,1.80045161983499,0,0.799266537048298,1.42977993658148,1.62786481617433,0.823240336780769,2.60588947434988,0.710783897485092,0,5.72734816413214,11.3299349618038,1.49959486773086,7.29742683847143,2.51128545716063,0,4.79249710983165,6.89171615004683,1.42636905040718,7.81819056004928,6.57524232161227,6.08807275015645,0,0,0,0,6.86055485400651,1.30139853857622,0,0.167516265334349,0,65.912618107352,59.832291840805,101.117385278393,6.01188309423785,12.5042630264919,4.88277042659524,7.69492187663986,9.99202337264106,11.1968714674094,13.8226869691402,2.70851489754947,2.27407504055985,1.03473071292505,0.664225598535437,0,0.260650843404249,1.17480694477644,1.37257369524342,0.82707210449155,3.23571301227925,1.38745825144478,0,0,0.30239029332968,8.43566546583841,8.13348458426731,5.3325417942284,9.48229704492187,10.7458522304008,3.69964018630297,2.96836132889982,2.31314540703983,2.48586415438378,1.97105174433142,1.03850885836724,2.09178681227927,0.120859449591622,1.80455823272956,0,0.459257792658427,0.364182336013434,0.262248829918848,0,0.924184045252977,0,1.46139224653261,2.21658420675039,0,0.340187410553031,1.51141141271498,0,0,0,0.254876273045038,0,0.671624264166535,0.219259876645935,0,0.512900250232778,0.984043937099117,1.95227036798582,3.19427136107939,3.02179233900533,1.89771849817352,0,0,0,0.096670718292122,1.07834031980251,1.22802939780904,0.275673144969061,2.47066563197029,2.0302337147992,0.681813019328807,0.26709610694021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| ||
|short_description=p3@TLR4 | |short_description=p3@TLR4 | ||
}} | }} |
Latest revision as of 18:46, 24 September 2015
Short description: | p3@TLR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TLR4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_138554, NR_024168, NR_024169, uc004bjz.2, uc004bka.2, uc004bkb.2_5end |
EntrezGene: | TLR4 |
HGNC: | 11850 |
UniProt: | D1CS53O00206 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.73e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.73e-15 | 42 |
defensive cell | 1.73e-14 | 48 |
phagocyte | 1.73e-14 | 48 |
myeloid leukocyte | 1.63e-11 | 72 |
monopoietic cell | 2.97e-10 | 59 |
monocyte | 2.97e-10 | 59 |
monoblast | 2.97e-10 | 59 |
promonocyte | 2.97e-10 | 59 |
macrophage dendritic cell progenitor | 2.14e-09 | 61 |
myeloid lineage restricted progenitor cell | 2.74e-09 | 66 |
granulocyte monocyte progenitor cell | 6.56e-09 | 67 |
fat cell | 1.28e-07 | 15 |