FFCP PHASE1:Hg19::chr17:40811378..40811451,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:40811378..40811451,+
|short_description=p2@TUBG2
|description=CAGE_peak_2_at_TUBG2_5end
|association_with_transcript=53bp_to_uc002iap.2_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27175 | |EntrezGene=27175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12419 | |HGNC=12419 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=53bp_to_uc002iap.2_5end | |||
|cluster_id=chr17:40811378..40811451,+ | |||
|description=CAGE_peak_2_at_TUBG2_5end | |||
|id=chr17:40811378..40811451,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.57e-12!180;CL:0002321!1.15e-09!248;CL:0000220!1.67e-09!246;CL:0000066!6.33e-09!254;CL:0000192!6.83e-07!42;CL:0000514!6.83e-07!42;CL:0000183!8.94e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.41e-09,250;CL:0000066,6.39e-09,253;CL:0000192,9.20e-07,43;CL:0000514,9.20e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.37e-29!365;UBERON:0000483!2.36e-22!309;UBERON:0000119!2.93e-22!312;UBERON:0000481!1.20e-19!347;UBERON:0000025!4.99e-16!194;UBERON:0004111!5.40e-15!241;UBERON:0000477!1.03e-14!286;UBERON:0000468!1.97e-14!659;UBERON:0000955!2.33e-13!69;UBERON:0006238!2.33e-13!69;UBERON:0000064!2.45e-13!219;UBERON:0003075!4.85e-13!86;UBERON:0007284!4.85e-13!86;UBERON:0004121!6.64e-13!169;UBERON:0000924!9.40e-13!173;UBERON:0006601!9.40e-13!173;UBERON:0002346!1.19e-12!90;UBERON:0000073!1.26e-12!94;UBERON:0001016!1.26e-12!94;UBERON:0001049!2.67e-12!57;UBERON:0005068!2.67e-12!57;UBERON:0006241!2.67e-12!57;UBERON:0007135!2.67e-12!57;UBERON:0000480!3.28e-12!626;UBERON:0000467!3.77e-12!625;UBERON:0002616!1.15e-11!59;UBERON:0001017!1.35e-11!82;UBERON:0005743!1.71e-11!86;UBERON:0000033!5.38e-11!123;UBERON:0002100!7.39e-11!216;UBERON:0003104!6.41e-10!238;UBERON:0009142!6.41e-10!238;UBERON:0002780!7.51e-10!41;UBERON:0001890!7.51e-10!41;UBERON:0006240!7.51e-10!41;UBERON:0003080!1.76e-09!42;UBERON:0000153!2.17e-09!129;UBERON:0007811!2.17e-09!129;UBERON:0001869!2.58e-09!32;UBERON:0003056!3.07e-09!61;UBERON:0000922!3.40e-09!612;UBERON:0002020!4.58e-09!34;UBERON:0003528!4.58e-09!34;UBERON:0001893!6.59e-09!34;UBERON:0005256!7.36e-09!143;UBERON:0002050!9.24e-09!605;UBERON:0005423!9.24e-09!605;UBERON:0002619!1.08e-08!22;UBERON:0001950!1.13e-08!20;UBERON:0000923!1.38e-08!604;UBERON:0005291!1.38e-08!604;UBERON:0006598!1.38e-08!604;UBERON:0002532!1.38e-08!604;UBERON:0002791!2.20e-08!33;UBERON:0000062!2.65e-08!511;UBERON:0000486!6.17e-08!82;UBERON:0000956!1.11e-07!25;UBERON:0000203!1.11e-07!25;UBERON:0000914!4.81e-07!83;UBERON:0002329!4.81e-07!83;UBERON:0003077!4.81e-07!83;UBERON:0003059!4.81e-07!83;UBERON:0007282!4.81e-07!83;UBERON:0009618!4.81e-07!83;UBERON:0007285!4.81e-07!83;UBERON:0004290!6.25e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.11e-08;22!UBERON:0001950;1.40e-08;20!UBERON:0001869;1.45e-08;32!UBERON:0001893;2.24e-08;34!UBERON:0003528;3.28e-08;34!UBERON:0002020;3.28e-08;34!UBERON:0002791;4.90e-08;32!UBERON:0000956;1.15e-07;25!UBERON:0000203;1.15e-07;25!UBERON:0006554;2.47e-07;30!UBERON:0001008;2.47e-07;30!UBERON:0000073;3.11e-07;53!UBERON:0002616;3.11e-07;53!UBERON:0000955;3.77e-07;68!UBERON:0002780;5.09e-07;41!UBERON:0001890;5.09e-07;41!UBERON:0000489;8.51e-07;29 | |||
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| ||
|short_description=p2@TUBG2 | |||
}} | }} |
Latest revision as of 15:24, 24 September 2015
Short description: | p2@TUBG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TUBG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 53bp_to_uc002iap.2_5end |
EntrezGene: | TUBG2 |
HGNC: | 12419 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.41e-09 | 250 |
epithelial cell | 6.39e-09 | 253 |
smooth muscle cell | 9.20e-07 | 43 |
smooth muscle myoblast | 9.20e-07 | 43 |