Coexpression cluster:C4413: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Coexpression_clusters
|full_id=C4413_Preadipocyte_optic_globus_thalamus_somatostatinoma_spinal_substantia
|id=C4413
}}") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=0.945082881963206,0.939899411344175,1.00698074048561,0.954525377923996,0.700932902710528,0.729301912771379,0.520195859055763,-0.0500607694397241,-0.161927359353068,0,0.316070858403045,-0.176901735437501,-0.262706372468367,-0.125574194514725,-0.21674606933334,-0.039385652247295,0.016340400615422,-0.125468485165647,-0.220755667059856,-0.101443891384927,-0.114103291236965,0,0.723746183285228,0.529771337537847,0.744384462584615,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,0,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.174954946765644,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.171944450415681,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.0464125282967927,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.141826888674627,-0.262706372468367,-0.138903290237202,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.0668498026651235,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.148644846110213,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,0.298803648852651,0,0,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,0,0.332882311435052,0.327412137573327,0.301610654522154,0.373928931922517,0.395047930016492,0.505661501944867,0.0468988837938676,0,-0.131942015784702,0.610448102617729,-0.262706372468367,-0.262706372468367,0.143405160391343,0.0697160876101768,0.102404861888327,-0.262706372468367,-0.262706372468367,-0.262706372468367,0.340954347833519,0.00686134429552798,0.228985441428537,0.194599788733868,0.0911133971897035,0,0.0479815950858988,0.612889886839468,0.700260431176021,0.724187839383618,0,0.245579806949268,0.0837072987557582,0,0,0.515501678754148,0.420070213858508,0.249474827027758,0.14095734208467,0.242877367654913,0.073058801099379,-0.262706372468367,-0.262706372468367,-0.262706372468367,0.38845565214721,0.532242057950803,-0.0420633580700377,0.109523411542048,0.0675180127465338,0.193313197142976,0.285401464592352,0,0.210163845666834,0.254500273831398,0.0657521671341522,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.0666762240659307,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.126460633924394,-0.220002606105589,-0.176465181916484,-0.0217078898168303,-0.262706372468367,-0.262706372468367,-0.08516746535267,-0.0864778750284715,-0.262706372468367,-0.0762479598471613,-0.146601015230049,-0.148603991328387,0,0.123813475369267,0,0.132361867779551,-0.069270266805359,-0.12863663883004,0.583657312398837,0.362259614392546,0.734904773627565,0.761507861469066,0.514800548454616,0.456151850964998,0.453530548525185,0.360034530338186,0.507389788389034,0.243025130239974,-0.0641090574837268,-0.262706372468367,-0.153193769299266,-0.127280752799022,0.172323244108972,0,-0.0289192603856555,0,0.238034735548311,-0.262706372468367,-0.0470051264672337,-0.262706372468367,-0.262706372468367,-0.262706372468367,0.610231703496619,0.547623395831139,0.664187274587292,0.548605758725501,0.531053852216938,0.721882399228824,0.49931597760152,0.573695342710834,0.649600068597565,0.472008087690004,0.063822815577167,-0.262706372468367,0,0.548401789076035,0.692962204905322,0.612278968077141,-0.262706372468367,0.093583741113269,0.206876533138446,-0.176524364536351,-0.262706372468367,-0.262706372468367,-0.0219805566613619,-0.262706372468367,-0.262706372468367,0,0.30830174225366,0.115685337012348,0.342781340998651,0.192434324206611,0.418994525371746,-0.262706372468367,0,-0.262706372468367,-0.262706372468367,-0.202525777982341,-0.229307593491207,-0.262706372468367,-0.154293515618666,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.180881058126125,-0.262706372468367,-0.262706372468367,-0.235969738124492,-0.262706372468367,-0.262706372468367,0,-0.113083962662063,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,0.384172143654239,-0.262706372468367,-0.262706372468367,0.300701276046156,0.309645999537164,-0.262706372468367,-0.132968533637328,-0.262706372468367,0.410398925539218,-0.262706372468367,-0.00186245199881102,-0.140249262505606,0.233195153867752,0,-0.0578057000259382,-0.262706372468367,-0.0586303787173783,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.0926648793720667,-0.262706372468367,0.122250485218718,0.34236061999358,0.299586365473942,0.629628506936481,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,0.178455840471772,0.69056778474388,0.248779474225184,0.399266295091813,0.359475907310366,-0.262706372468367,-0.262706372468367,-0.262706372468367,0.0657667425430781,-0.262706372468367,-0.262706372468367,-0.126320773634653,-0.191402955063025,-0.0503030971280198,0,0.0526869612470967,-0.00142443766225531,-0.208006126192526,-0.041494174577332,-0.126385940859077,0.396470631524724,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.178682655586784,-0.235620080142984,-0.0909210753474451,-0.172207036891842,0.913555657847212,1.51543175685597,0.960905460353741,0.591640920142299,1.08840400932526,0.716170367107993,0.13247680467245,-0.0975721682307844,-0.130727511587387,-0.196658517372009,-0.207200463692584,-0.0782626117558912,-0.213155214907923,0.127788614226658,0.448564572652931,0.350076435634888,-0.262706372468367,0.28281937068846,0,0.0707872625687806,0.00892687318066787,0.077081383129453,0.334489044474959,0.381929281130067,0.127165533945345,0.399917863503894,0.677379720353818,-0.262706372468367,-0.262706372468367,0,0,0.0501008247771819,-0.262706372468367,-0.262706372468367,0.685450787142122,0.472476754664419,0.398079668020279,0.830607698466884,0.590696987274795,0.568245552796687,-0.262706372468367,-0.262706372468367,0.153407886950365,-0.185941651506272,-0.20048226754825,-0.200687390073553,-0.112407573988802,-0.218393913835877,-0.152105421888484,-0.108546301370205,0.267020778601084,0.0365196206805297,0.217515990360314,0.320455350920953,0.457339320850523,0.11651511574902,0.212087596895138,0.515239536777158,0.191864335465569,0,0.294776644964446,0.269947998814233,0.553427623243333,-0.262706372468367,-0.262706372468367,0.000360928408787986,-0.163752075802605,0,-0.262706372468367,-0.0110806481540303,0,0.112533739426662,-0.0305048040666066,0.345000035290412,0.620157552899625,0.152673061679609,-0.0902103530003938,0.381928034226241,0.455463520757714,0.201335647930789,0.0501251100268992,0,0.371588683646295,0.620067955400557,0.468439722842402,-0.064385984802719,-0.262706372468367,0.458371663179464,0.438663456171676,0.66857625932076,-0.153187657577442,-0.0353999831870181,0.385013263539357,-0.0298316457695537,0.0926772896941174,0,-0.262706372468367,0,-0.222807814161295,-0.262706372468367,-0.262706372468367,0.80388004933449,-0.246764185994111,-0.262706372468367,0,-0.172898935234377,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.218627776892696,-0.262706372468367,0.17550883096598,-0.262706372468367,-0.204178159239164,-0.262706372468367,-0.198463235160651,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.140614428294371,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,0.728098089244593,-0.262706372468367,-0.262706372468367,-0.262706372468367,0.454579790697901,0.11292814946238,0.27602888693335,0.997706474697448,1.02963493557009,0.907622225665536,-0.262706372468367,-0.10973018077887,1.1506939641012,0.343580713723046,0.58526005444307,0.367985644135767,-0.262706372468367,0.279909534807289,0.799494435991828,0.989985127527825,-0.262706372468367,0.671566906091097,-0.262706372468367,1.05960924690934,0.891276982551438,1.04578139475997,0.844378621346546,0.238423591630642,0.763442679978285,0.653747352582923,0.293859634352333,0.98098850925315,0.681815458365363,0.673236053049817,0.878134742494683,0.87320904127198,0.85734393877579,0.857216955886674,0.804763298400085,0.720702590140103,0.857724390849255,0.853867950051378,0.672458796939328,0.061951345867606,0.295559134425994,1.09719299881782,-0.262706372468367,-0.0276677537606012,-0.177310625687139,0.586161194305177,0.0380625695285996,0.538721196345422,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,-0.262706372468367,0.310510535228716,0.604530030366031,-0.0305325532229271,0,0.481631027962373,0.278474811229825,0.207103666835013,-0.262706372468367,-0.0882814350824143,-0.219571343158899,1.37004240659911,1.26756613171826,1.20392788773322,-0.262706372468367,0.378260407361409,-0.262706372468367,0.618746092714506,0.271296154182554,0.406877618370976,0.476568996063851,-0.148546982723684,0.0818426764683037,0.373105922850817,0.0832529704547447,0.211618608948668,0.34137997173303,0.58502005924883,-0.206306711511927,0.420188748165397,-0.119076625116383,-0.262706372468367,0.676212110229868,-0.262706372468367,0.633251778107362,0.689927989719883,0.669494454301196,0.58918204354133,-0.262706372468367,0.698016758533572,0.338817466616485,0,1.11279732310612,0.615826173178679,0.982630464063704,0.476273288919699,0.242159281367516,-0.0650505066089604,-0.173128626213857,-0.193928863680028,0.0584468268118252,0.530986703560343,0.699560121123555,0.431127991812682,0.392668063946733,0.770551173008448,-0.262706372468367,1.36577898976533,1.19066696070114,-0.262706372468367,0.656686208106913,-0.262706372468367,0.958442107264992,1.04370740868232,0.661752610875259,0.709798145811624,1.00676612849507,1.1172634088906,0.589388929208795,0.447390536536058,0.390011583078166,-0.262706372468367,-0.262706372468367,-0.262706372468367,0.764475732060321,-0.262706372468367,1.18509245470237,0.987533006830483,-0.141637135598101,-0.262706372468367,-0.253853025756962,0.148040036014629,0.349569573193691,1.08121834395298,-0.262706372468367,0.461098710118644,0.571234579975026,-0.143186221637387,0.686129087858338,0.792802711378572,0.648288852451483,1.09616149086773,-0.262706372468367,0.188365813972295,-0.0805981841658955,-0.262706372468367,0.596527992659905,-0.262706372468367,0.244480586695918,0.799425084769649,0.432504688352274,-0.150077241653712,1.22123781636818,1.12377430883391,0.820819339693456,0.800710509186265,0.933583768067025,0.889849695124089,1.07078441213183,0.212189087531767,-0.262706372468367,-0.262706372468367,-0.048302004390655,1.06216555586823,1.16576955039109,1.16929026078196,0.916228095885958,-0.199352708284332,1.04890976276032,0.979632063614887,1.01658711488353,1.0958031997774,0.99935908081292,1.19636543916456,0.635877955703036,0.378219170794784,-0.262706372468367,-0.153646003393909,0.511122638133968,0,0.27173154926029,-0.262706372468367,-0.171492122347172,-0.262706372468367,-0.187377340968015,0.0595110196834014,-0.262706372468367,-0.0990441365972027,-0.05725198345658,-0.0527227865944377,0.0130956533716927,-0.142595430601723,-0.262706372468367,-0.0131864419909768,-0.262706372468367,-0.262706372468367,-0.0803644713624565,-0.262706372468367,0,-0.0969731630281366,-0.262706372468367,-0.107479004773845,-0.262706372468367,-0.175219504732663,0.268793822946726,0.310996518806128,0.217372026558376,0.518862030768691,0.262225212783564,0.234833613085953,0.310476040226166,0.482924057353277,0.340415490573919,0.88126428297453,0.445742472269291,0.6431382834192,0.736887199779333,0.255407160422856,0.37114145839712,0.645541730857031,0.685170312948211,0.681217147753659,0.667109067943999,1.00539746761841,0.903901961721834,0.597310886238911,0.777796640085754,0.361560242019418,0.430348970477685,0.310983997102697,-0.262706372468367,-0.14210770393402,-0.262706372468367,0.629955306931791,-0.0230506424248796,-0.205847426305768,-0.262706372468367,0.48580704926669,0.963899906004013,-0.106130770763739,0.333743393309182,0.0773662934516758,0.491385611207728,0.3086048704388,0.517452768749197,0.11991684384043,0,1.08664418179825,-0.131512605969369,0.77071156324463,1.09903322286189,0.99265272133459,1.03090986674233,1.06692386847134,0.762630723308804,0.948604970545832,1.02230722581781,1.56457558743919,0,-0.0948342948689064,-0.262706372468367,0.0474795670351238,0.130129686964982,0,-0.00848108171271383,0.161745814848269,0.185408890175652,0.0078235917531424,-0.0797745872928419,0.939383458105352,-0.0609203750578446,1.1472047995409,1.22067183317049,0.985913287015062,1.18739066440375,0.772545070744162,0.369705017845082,0.848188525501106,-0.262706372468367,0.829693381262392,0.413979269027503,0.377062637258266,0.457350278861426,0.9421107615003,0.793366324737403,-0.215340376076874,0.913946048258173,1.20836745703723,1.00614139921327,0.619183340909336,0.351608504292727,0.748533465253353,0.85293771384879,0.723547349909537,0.548798411627375,0.776019834824094,0,0.813160092860728,0.119264873228193,-0.262706372468367,0.699726364536452,0.651922461866774,-0.0290690043743127,0.22139716771153,0.228210290646661,0.634020287450902,-0.262706372468367,-0.262706372468367,0.672849605337511,0.337000904734508,0.3161456321653,0.420217342283666,0.738322030582274,-0.262706372468367,-0.0901992709898529,1.29312728614972,1.02226502297294,1.12104238390354,0.70376796733291,0,0.638385457438078,-0.0288170565934465,-0.100804268534561,0.570342456228458,0.705914612914245,0.187582506606743,0.157492767753078,0.617217270598488,0.646277066055792,1.12765732715173,1.314517052238,1.05677622060509,0.76753223449169,0.589811246973592,0.718441590069126,0.651348382477326,-0.262706372468367,0,0.178906193598926,-0.262706372468367,0.128347492021885,0.921148789665293,1.29617107242613,-0.262706372468367,1.01059006793015,0.639384187745824,0.184415109078388,-0.120666169141192,0.003430130124083,0.00803140362516641,0.650656332305045,0.0579914123153553,-0.137446338549108,-0.114117499646346,-0.148024049188759,0,-0.262706372468367,0.139530721565415,0.106476197180537,1.22412419701709,1.18687687955102,0.87021913880414,0.9725286078599,0.0378011765147326,0.154589669432965,0.485280464904762,0.885528098373898,0.905908032172609,0.942022704443822,0.986967167300652,0.288667741109266,0.556464437353755,0.827567630968972,0.0339876779246108,0.186674030176709,0.686765434408025,0.0510727037796366,0.753726795654674,0.318395615219801,0.506874325661686,0.912831308127429,0.341423185637418,-0.262706372468367|full_id=C4413_Preadipocyte_optic_globus_thalamus_somatostatinoma_spinal_substantia|id=C4413|ontology_enrichment_celltype=|ontology_enrichment_disease=DOID:0050687!3.52e-07!143|ontology_enrichment_uberon=UBERON:0007023!3.57e-32!114;UBERON:0000477!9.92e-30!373;UBERON:0001049!2.39e-27!56;UBERON:0005068!2.39e-27!56;UBERON:0006241!2.39e-27!56;UBERON:0007135!2.39e-27!56;UBERON:0004111!3.55e-27!240;UBERON:0000025!7.20e-27!192;UBERON:0000073!1.35e-25!53;UBERON:0002616!1.35e-25!53;UBERON:0001017!2.43e-23!81;UBERON:0011216!4.41e-23!223;UBERON:0001016!6.84e-23!89;UBERON:0003075!1.54e-22!82;UBERON:0007284!1.54e-22!82;UBERON:0000955!1.60e-22!68;UBERON:0006238!1.60e-22!68;UBERON:0002780!3.95e-22!41;UBERON:0001890!3.95e-22!41;UBERON:0003080!3.95e-22!41;UBERON:0006240!3.95e-22!41;UBERON:0002346!7.39e-22!86;UBERON:0000481!1.67e-20!342;UBERON:0001893!1.81e-19!34;UBERON:0003528!1.91e-19!34;UBERON:0002020!1.91e-19!34;UBERON:0002791!4.06e-18!32;UBERON:0001869!4.48e-18!32;UBERON:0000483!8.97e-18!306;UBERON:0010314!7.51e-17!132;UBERON:0000119!9.27e-17!309;UBERON:0003056!9.79e-17!61;UBERON:0000468!9.81e-16!656;UBERON:0000064!3.06e-14!218;UBERON:0000956!4.50e-14!25;UBERON:0000203!4.50e-14!25;UBERON:0010371!2.77e-13!104;UBERON:0002619!3.36e-13!22;UBERON:0000467!2.89e-12!624;UBERON:0000480!5.11e-12!625;UBERON:0001950!5.27e-12!20;UBERON:0004121!1.53e-11!171;UBERON:0000924!1.53e-11!171;UBERON:0006601!1.53e-11!171;UBERON:0000062!1.95e-09!503;UBERON:0000922!1.21e-08!592;UBERON:0005423!8.49e-08!581;UBERON:0000923!9.83e-08!560;UBERON:0010316!9.83e-08!560;UBERON:0005291!9.83e-08!560;UBERON:0006598!9.83e-08!560;UBERON:0010317!9.83e-08!560;UBERON:0002532!9.83e-08!560;UBERON:0002050!1.58e-07!564;UBERON:0000125!7.07e-07!9;UBERON:0002308!7.07e-07!9|tf_chipseq_enrich=E2F1#1869;3:4.90738921487932:0.00846098534723939:0.0326929168182446!ZNF263#10127;3:8.22184163701068:0.00179904392556587:0.0109819597020384|tfbs_overrepresentation=0.147255,0.0586687,0.039404,0.0477154,0.199763,0.287811,0.0430074,0.0172144,0.03272,0.0257057,0.139423,0.225367,0.188771,0.125978,0.148679,0.0619003,0.140982,0.0982016,0.0528514,0.108057,0.188635,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.209392,0.0907212,0.143747,0.0933697,0.204953,0.114046,0.0180314,0.208242,0.0665252,0.0844722,0.00687964,0.0429682,0.120351,0.0667043,0.0964797,0.0246116,0.140039,0.184019,0.120917,0.0362416,0.0380166,0.18151,0.111283,0.121201,0.154071,0.0541794,0.0701653,0.0929951,0.198787,0.0384161,0.107455,0.0244227,0.0783235,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.0709764,0.0600088,0.0860723,0.167053,0.378921,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.291327,0.251834,0.064341,0.209032,5.63916e-05,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.0124566,0.153631,0.0927458,0.27413,0.0574857,0.276221,0.141874,0.0370665,0.219088,0.0409286,0.0669887,0.338096,0.144217,0.0400492,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.139021,0.0838393,0.16671,0.214708,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.00166778,0.155998,0.0641358,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.200647,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.147788,0.273479,0.114283,0.0400322,0.127369,0.0403542,0.312091,0.179689,0.137725,0.46397,0.0541353,0.0799324,0.090079,0.140334,0.181817,0.178449,0.0356339,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.187297,0.122935,0.00240885,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.27358,0.15185,0.206299,0.178359,0.0458667,0.104357,0.121154,0.1129,0.312578,0.169057,0.164202,0.100942,0.062995,0.10299,0.0105855,0.37245,0.15606,0.161026,0.0738599,0.126611,0.138852,0.085973,0.060453,0.059896,0.00177343,0.0133328,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.263087,0.163502,0.214803,0.182472,0.348993,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.0119747,0.117027,0.159052,0.185164,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,3.87374e-06,0.0619218,0.0163125,0.163376,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.000364005,0.063292,0.254773,0.119261,0.0865903,0.0380459,0.130174,0.584917,0.00909613,3.18958e-05,0.635872,0.563047,0.0986134,9.12427e-06,0.335423,0.000572844,0.261553,0.446302,0.0806291,0.309233,0.49143,0.00800846,0.395854,0.329568,0.53472,0.248224,0.271958,0.292154,0.0964816,0.39729,0.0582602,0.0139202,0.187251,0.362792,0.181715,0.423979,0.109988,0.330894,0.218329,0.107929,0.376924,0.025356,0.0883629,0.528324,0.000977524,0.370782,0.00226755,0.484505,0.253571,0.276829,0.301787,0.481778,0.316882,0.223503,0.503224,0.0669244,0.283727,0.314747,0.577664,0.291709,0.448095,0.00192508,0.416816,0.292835,0.476744,0.439556,0.373868,0.213592,0.608919,0.18237,0.00166394,2.91154e-07,0.161148,0.275351,0.236471,0.185661,0.346319,0.535598,0.270984,0.625945,0.155555,0.0367769,0.169228,0.248634,0.281576,0.135034,0.163244,0.0670502,0.0730934,0.184794,0.230427,0.0582356,0.581837,0.1002,0.671377,0.0462094,0.551561,0.448039,0.218623,0.000612438,0.00142673,0.0451077,0.0747529,0.229003,0.000112408,0.061213,0.00568155,0.294698,0.34331,0.477304,0.0465597,0.0605279,0.109738,0.278044,0.085507,0.0193295,0.228096,0.336314,0.19763,0.15631,0.00172609,0.0182254,0.48267,0.420626,0.516462,1.09487e-06,0.335105,0.144809,0.145539,0.385517,0.376191,0.0032214,0.459928,0.252232,0.152681,0.0465712,0.137098,0.259235,0.134788,0.0985856,0.18767,0.293698,0.284593,0.343734,0.0526965,0.305777,0.601433,0.503082,0.169823,0.284629,0.262537,0.359455,0.226257,0.405955,0.41707,0.363685,0.0256829,2.84237e-07,0.206222,0.525396,0.284166,0.113671,0.269226,0.339277,0.00922147,0.281425,0.141758,0.455379,0.00680512,0.159617,0.238587,0.372281,0.232251,0.189515,0.0891382,0.0595618,0.524997,0.257493,0.347298,0.182325,0.34988,0.0277379,0.0958562,0.273024,0.262389,0.00689935,0.0697683,0.0556835,0.192544,0.0779981,0.0575676,0.144322,0.223391,0.203656,0.442884,0.00303204,7.22648e-05,0.111931,0.28934,0.0435386,0.303336,0.126478,0.134852,0.10689,0.00427764,0.0627924,0.0129363,0.0179103,0.303939,0.279795,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.210369,0.193675,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.111277,0.219383,0.332809,0.19559,0.132201,0.0190418,0.0481795,0.199971,0.406014,0.127758,0.175785,0.0012141,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.107043,0.275244,0.00481323,0.173708,0.141119,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.153187,0.0797897,0.0974211,0.160149,0.00796449,0.0906475,0.0558058,0.28262,0.00662343,0.137332,0.0145999,0.0656973,0.211746,0.220538,0.0801488,0.0757897,0.161801,0.193215,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.016278,0.370421,0.0330727,0.348757,0.219556,0.0394698,0.0596469,0.103658,0.122476,0.00615421,0.11002,0.26144,0.0286025,2.02725e-05,0.144567,0.038848,0.0874516,0.0550279,0.000558597,0.0353101,0.217069,0.190048,0.131088,0.394069,0.237101,0.286988,0.0761239,0.0158143,0.0818785,0.182701,0.00836526,0.147698,0.141463,0.167267,0.140622,0.0889592,0.309588,0.00502301,0.0473033,0.094881,0.445524,0.132886,0.0774373,0.109194,0.128564,0.131452,0.112518,0.448776,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.144075,0.0340203,0.0741807,0.00447267,0.153605,0.655293,0.21727,0.289306,0.119215,0.192475,0.177967,1.93633e-06,0.057571,0.047591,0.0899568,0.0608699,0.175319,0.300597,0.0713214,0.223874,0.291114,0.0355833,0.125606,0.175094,4.67397e-05,0.00739585,0.206454,0.0257531,0.108277,0.0673484,0.108748,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,0.226171,0.0124298,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.234298,0.0759837,0.286863,0.152372,0.00144552,0.0257725,0.101607,0.00771936,0.172982,0.340936,0.151597,0.0626744,0.191335,0.148574,0.15663,0.155821,0.0718905,0.0919008,0.0602373,0.0109522,0.15063,0.0973823,0.15503,0.170295,0.193653,0.137219,0.228144,0.251466,0.288096,0.11903,0.0838874,0.0622625,0.113145,0.112651,0.186638,0.174776,0.0948451,0.264079,0.249049,0.140533,0.0997756,0.257598,0.103667,0.113069,0.025556,0.16791,0.09066,0.585505,0.166967,0.188651,0.0813902,0.184948,0.156261,0.311847,0.511859,0.0590944,0.247324,0.178389,0.218229,0.231073,0.000211542,0.0170505,0.0360851,0.000227331,0.131093,0.0434602,0.133616,0.103051,0.36927,0.449036,0.407369,0.231447,0.544776,0.43956,0.37006,0.10748,0.022688,0.197484,0.396996,0.36145,0.406019,0.381071,0.580441,0.0863135,0.11074,0.0100497,0.390366,0.48809,0.153829,0.443185,0.522904,2.0991e-06,3.95207e-08,0.0279976,0.166658,0.617852,0.000154756,0.284625,0.0344717,0.55194,0.375373,0.28907,0.164197,0.462688,0.287881,0.21103,0.0283889,0.336276,0.132529,0.258219,0.446557,0.243383,6.92931e-08,0.390974,1.07621e-05,0.109758,0.161598,0.000599447,0.0868402,0.496032,1.05823e-06,0.37357,1.03943e-08,0.0282154,0.00104348,0.000558506,0.000852086,0.20342,0.200493,0.20558,0.300504,0.25656,0.00254768,0.349197,0.383291,0.156104,0.141318,0.411941,0.0961477,0.314438,0.354789,0.163828,0.230581,0.120226,0.28424,0.562405,0.314429,0.181415,0.282286,0.000976922,0.0727621,0.408413,0.0374737,0.322213,0.0931134,0.33942,0.0700181,0.387276,0.00694606,0.0816402,0.180745,0.222037,0.416621,0.416292,0.462712,0.0457685,0.579431,0.204817,0.452428,0.138871,0.000165333,0.166905,0.19783,0.0833851,0.316453,0.48065,0.175199,0.332919,0.373557,0.00101302,0.408861,0.365487,0.0425451,0.39088,0.363192,0.236011,0.203486,0.273398,0.375787,0.119167,0.00977892,0.275347,0.019895,0.305885,0.241132,0.371414,0.30666,0.303709,0.495883,0.386538,0.508064,0.250964,0.383276,0.457886,0.504711,0.220231,0.159791,0.196976,0.191517,0.463751,0.235208,0.307334,0.459728,0.283463,0.0102434,0.135386,0.399569,0.273281,0.368095,0.275089,0.384593,0.138622,0.359231,0.00876091,0.197805,0.0153645,0.387069,0.332774,0.52832,0.299887,0.634365,0.205413,0.17639,0.0779009,0.276869,0.205298,0.0337138,0.18966,0.258854,0.188263,0.0719199,0.264884,0.162568,0.19104,0.163057,0.219428,0.00177656,0.000130607,0.0953646,0.166124,0.252184,0.378361,0.255516,0.20753,0.447185,0.179412,0.0200828,0.220904,0.222977,0.341681,0.310674,0.21801,0.198614,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.12405,0.0172483,0.226869,0.27872,0.0855609,0.131118,0.20837,0.247588,0.222339,0.0673329,0.20847,0.266544,0.113092,0.0111711,0.229428,0.162145,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.350452,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.21593,0.158479,0.220319,0.195218,0.124213,0.0370716,0.30793,0.180606,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.0183464,0.0723291,0.258496,0.261744,0.203781,0.21382,0.207559,0.141867,0.193031,0.249101,0.00700099,0.224568,0.246105,0.173026,0.200432,0.139785,0.197112,0.240478,0.156465,0.13108,0.036274,0.222798,0.172134,0.176789,0.0969345,0.202137,0.310405,0.280943,0.00206803,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.319922,0.261724,0.211332,0.187731,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.204393,0.295769,0.286691,0.347036,0.141729,0.263159,0.0359756,0.200105,0.227491,0.29837,0.253509,0.177664,0.28365,0.264413,0.131761,0.160658,0.206239,0.19924,0.28689,0.236464,0.325148,0.115817,0.218052,0.223831,0.11528,0.194982,0.190993,0.281727,0.283218,0.249955,0.164638,0.224257,0.0935776,0.0607319,0.225752,0.207791,0.000158246,0.0859274,0.316866,0.171683,0.158847,0.271275,0.071111,0.270604,0.101021,0.222548,0.175934,0.157274,0.215705,0.252796,0.205954,0.0107847|tfbs_overrepresentation_for_novel_motifs=0.699513,0.14394,0.690871,0.855819,0.641468,0.853988,0.937929,0.494933,0.491742,1.84557,0.820209,0.985163,1.11328,0.925331,0.639839,0.667627,1.17594,0.575162,0.452865,0.824321,0.69094,0.242883,0.845342,0.635379,0.743951,1.00973,0.409304,0.842925,0.645155,1.00813,0.795576,1.21459,0.534793,0.439574,0.599922,0.427404,0.596053,0.855276,0.567465,2.05816,0.598234,0.777097,0.259059,0.63803,0.901413,0.726632,0.939121,0.808003,0.247669,0.645308,1.02504,0.951993,0.336258,1.29475,1.45259,0.928548,0.650353,0.892517,0.388177,0.891404,1.25741,0.941709,0.492369,1.14672,0.961293,1.11026,1.54311,1.91674,1.2037,1.75271,0.762094,0.502203,8.85269,1.45054,3.91579,0.414196,0.396746,1.12884,1.20029,0.73687,0.459024,2.58159,0.960908,0.498519,1.39759,1.55552,0.303648,0.381882,1.053,2.0169,1.63834,3.03421,1.23218,0.543775,2.62406,0.560075,0.450952,1.27663,1.05794,0.360456,0.569121,1.22626,1.27082,1.1798,1.09802,0.815119,1.16312,0.921547,0.743661,0.622396,0.703975,1.26794,0.684398,0.830777,1.58942,0.594137,3.97057,0.794219,1.10778,0.547323,1.44203,1.0504,0.850918,0.973172,1.70203,1.12965,0.930979,1.2374,1.48578,1.37952,1.37044,0.798812,1.50051,0.969553,1.65144,0.974093,0.788803,0.843556,1.60823,2.47382,2.06967,1.57016,0.932872,1.27296,1.09989,0.883164,1.08214,2.31409,0.773313,0.539692,0.318511,1.29196,1.37083,0.481626,0.941179,1.78371,1.03563,0.624795,0.744018,0.710709,1.56892,1.35169,1.19946,0.714443,1.11698,0.960047,2.24188,0.936473,0.265282|tfbs_overrepresentation_jaspar=MA0003.1;5.30359,MA0004.1;0.826076,MA0006.1;0.639288,MA0007.1;0.804807,MA0009.1;1.3275,MA0014.1;3.14798,MA0017.1;0.686276,MA0019.1;0.990656,MA0024.1;1.21731,MA0025.1;1.46617,MA0027.1;2.95767,MA0028.1;0.658629,MA0029.1;1.23771,MA0030.1;1.22561,MA0031.1;1.15713,MA0038.1;0.94098,MA0040.1;1.24388,MA0041.1;0.847069,MA0042.1;0.810843,MA0043.1;1.32783,MA0046.1;1.31611,MA0048.1;1.62115,MA0050.1;0.81185,MA0051.1;0.936307,MA0052.1;2.78861,MA0055.1;1.67416,MA0056.1;0,MA0057.1;2.4146,MA0058.1;0.716037,MA0059.1;0.714521,MA0060.1;0.492218,MA0061.1;0.456531,MA0063.1;0,MA0066.1;0.941452,MA0067.1;1.65513,MA0068.1;0.405474,MA0069.1;1.31207,MA0070.1;1.30033,MA0071.1;0.897953,MA0072.1;1.29561,MA0073.1;0.211629,MA0074.1;0.935474,MA0076.1;0.734647,MA0077.1;1.28751,MA0078.1;1.04495,MA0081.1;0.714712,MA0083.1;1.33535,MA0084.1;1.84562,MA0087.1;1.29304,MA0088.1;0.257905,MA0089.1;0,MA0090.1;0.751469,MA0091.1;0.829044,MA0092.1;1.84783,MA0093.1;0.642957,MA0095.1;0,MA0098.1;0,MA0100.1;0.956299,MA0101.1;0.646932,MA0103.1;0.628063,MA0105.1;0.31555,MA0106.1;0.986396,MA0107.1;0.556367,MA0108.2;1.15387,MA0109.1;0,MA0111.1;0.767139,MA0113.1;1.00436,MA0114.1;0.549955,MA0115.1;1.57693,MA0116.1;0.560723,MA0117.1;1.36676,MA0119.1;0.695578,MA0122.1;1.39371,MA0124.1;1.53432,MA0125.1;1.44766,MA0130.1;0,MA0131.1;1.06461,MA0132.1;0,MA0133.1;0,MA0135.1;1.35921,MA0136.1;0.948776,MA0139.1;1.96087,MA0140.1;0.894983,MA0141.1;0.712476,MA0142.1;1.12317,MA0143.1;1.00455,MA0144.1;0.531867,MA0145.1;3.85295,MA0146.1;0.107247,MA0147.1;0.565108,MA0148.1;0.854239,MA0149.1;0.884158,MA0062.2;0.449458,MA0035.2;0.894194,MA0039.2;3.37171,MA0138.2;1.04628,MA0002.2;0.476938,MA0137.2;0.666381,MA0104.2;1.2307,MA0047.2;0.973066,MA0112.2;0.264678,MA0065.2;0.277623,MA0150.1;0.744617,MA0151.1;0,MA0152.1;0.902317,MA0153.1;1.43021,MA0154.1;1.51687,MA0155.1;0.256269,MA0156.1;0.669101,MA0157.1;1.09377,MA0158.1;0,MA0159.1;0.565904,MA0160.1;0.871361,MA0161.1;0,MA0162.1;3.52399,MA0163.1;0.387745,MA0164.1;1.01792,MA0080.2;0.643061,MA0018.2;0.987913,MA0099.2;0.902716,MA0079.2;8.15771,MA0102.2;1.88331,MA0258.1;0.519674,MA0259.1;0.575594,MA0442.1;0}} | ||
|full_id=C4413_Preadipocyte_optic_globus_thalamus_somatostatinoma_spinal_substantia | |||
|id=C4413 | |||
}} |
Latest revision as of 12:45, 17 September 2013
Full id: C4413_Preadipocyte_optic_globus_thalamus_somatostatinoma_spinal_substantia
Phase1 CAGE Peaks
Hg19::chr4:41362776..41362792,+ | p2@LIMCH1 |
Hg19::chr4:41362796..41362841,+ | p1@LIMCH1 |
Hg19::chr4:41362846..41362859,+ | p5@LIMCH1 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br>disease_data<br>
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.52e-07 | 143 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 5.30359 |
MA0004.1 | 0.826076 |
MA0006.1 | 0.639288 |
MA0007.1 | 0.804807 |
MA0009.1 | 1.3275 |
MA0014.1 | 3.14798 |
MA0017.1 | 0.686276 |
MA0019.1 | 0.990656 |
MA0024.1 | 1.21731 |
MA0025.1 | 1.46617 |
MA0027.1 | 2.95767 |
MA0028.1 | 0.658629 |
MA0029.1 | 1.23771 |
MA0030.1 | 1.22561 |
MA0031.1 | 1.15713 |
MA0038.1 | 0.94098 |
MA0040.1 | 1.24388 |
MA0041.1 | 0.847069 |
MA0042.1 | 0.810843 |
MA0043.1 | 1.32783 |
MA0046.1 | 1.31611 |
MA0048.1 | 1.62115 |
MA0050.1 | 0.81185 |
MA0051.1 | 0.936307 |
MA0052.1 | 2.78861 |
MA0055.1 | 1.67416 |
MA0056.1 | 0 |
MA0057.1 | 2.4146 |
MA0058.1 | 0.716037 |
MA0059.1 | 0.714521 |
MA0060.1 | 0.492218 |
MA0061.1 | 0.456531 |
MA0063.1 | 0 |
MA0066.1 | 0.941452 |
MA0067.1 | 1.65513 |
MA0068.1 | 0.405474 |
MA0069.1 | 1.31207 |
MA0070.1 | 1.30033 |
MA0071.1 | 0.897953 |
MA0072.1 | 1.29561 |
MA0073.1 | 0.211629 |
MA0074.1 | 0.935474 |
MA0076.1 | 0.734647 |
MA0077.1 | 1.28751 |
MA0078.1 | 1.04495 |
MA0081.1 | 0.714712 |
MA0083.1 | 1.33535 |
MA0084.1 | 1.84562 |
MA0087.1 | 1.29304 |
MA0088.1 | 0.257905 |
MA0089.1 | 0 |
MA0090.1 | 0.751469 |
MA0091.1 | 0.829044 |
MA0092.1 | 1.84783 |
MA0093.1 | 0.642957 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.956299 |
MA0101.1 | 0.646932 |
MA0103.1 | 0.628063 |
MA0105.1 | 0.31555 |
MA0106.1 | 0.986396 |
MA0107.1 | 0.556367 |
MA0108.2 | 1.15387 |
MA0109.1 | 0 |
MA0111.1 | 0.767139 |
MA0113.1 | 1.00436 |
MA0114.1 | 0.549955 |
MA0115.1 | 1.57693 |
MA0116.1 | 0.560723 |
MA0117.1 | 1.36676 |
MA0119.1 | 0.695578 |
MA0122.1 | 1.39371 |
MA0124.1 | 1.53432 |
MA0125.1 | 1.44766 |
MA0130.1 | 0 |
MA0131.1 | 1.06461 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.35921 |
MA0136.1 | 0.948776 |
MA0139.1 | 1.96087 |
MA0140.1 | 0.894983 |
MA0141.1 | 0.712476 |
MA0142.1 | 1.12317 |
MA0143.1 | 1.00455 |
MA0144.1 | 0.531867 |
MA0145.1 | 3.85295 |
MA0146.1 | 0.107247 |
MA0147.1 | 0.565108 |
MA0148.1 | 0.854239 |
MA0149.1 | 0.884158 |
MA0062.2 | 0.449458 |
MA0035.2 | 0.894194 |
MA0039.2 | 3.37171 |
MA0138.2 | 1.04628 |
MA0002.2 | 0.476938 |
MA0137.2 | 0.666381 |
MA0104.2 | 1.2307 |
MA0047.2 | 0.973066 |
MA0112.2 | 0.264678 |
MA0065.2 | 0.277623 |
MA0150.1 | 0.744617 |
MA0151.1 | 0 |
MA0152.1 | 0.902317 |
MA0153.1 | 1.43021 |
MA0154.1 | 1.51687 |
MA0155.1 | 0.256269 |
MA0156.1 | 0.669101 |
MA0157.1 | 1.09377 |
MA0158.1 | 0 |
MA0159.1 | 0.565904 |
MA0160.1 | 0.871361 |
MA0161.1 | 0 |
MA0162.1 | 3.52399 |
MA0163.1 | 0.387745 |
MA0164.1 | 1.01792 |
MA0080.2 | 0.643061 |
MA0018.2 | 0.987913 |
MA0099.2 | 0.902716 |
MA0079.2 | 8.15771 |
MA0102.2 | 1.88331 |
MA0258.1 | 0.519674 |
MA0259.1 | 0.575594 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
TF | #promoters | Enrichment | p-value | q-value |
---|---|---|---|---|
E2F1#1869 | 3 | 4.90738921487932 | 0.00846098534723939 | 0.0326929168182446 |
ZNF263#10127 | 3 | 8.22184163701068 | 0.00179904392556587 | 0.0109819597020384 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.