FFCP PHASE1:Hg19::chr10:102133271..102133305,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90271 | |EntrezGene=90271 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=28060 | |HGNC=28060 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_NR_026762,uc001kqz.3,uc001kra.3_5end | |association_with_transcript=-27bp_to_NR_026762,uc001kqz.3,uc001kra.3_5end | ||
|cluster_id=chr10:102133271..102133305,+ | |||
|coexpression_cluster_id=C2970 | |coexpression_cluster_id=C2970 | ||
|description=CAGE_peak_4_at_LINC00263_5end | |description=CAGE_peak_4_at_LINC00263_5end | ||
|id=chr10:102133271..102133305,+ | |id=chr10:102133271..102133305,+ | ||
|ontology_enrichment_celltype=CL:0000542!2.15e-18!53;CL:0000051!2.15e-18!53;CL:0000838!6.80e-18!52;CL:0000945!2.45e-10!24;CL:0000826!2.45e-10!24;CL:0000084!2.34e-08!25;CL:0000827!2.34e-08!25;CL:0000791!3.91e-07!18;CL:0000789!3.91e-07!18;CL:0002420!3.91e-07!18;CL:0002419!3.91e-07!18;CL:0000790!3.91e-07!18 | |ontology_enrichment_celltype=CL:0000542!2.15e-18!53;CL:0000051!2.15e-18!53;CL:0000838!6.80e-18!52;CL:0000945!2.45e-10!24;CL:0000826!2.45e-10!24;CL:0000084!2.34e-08!25;CL:0000827!2.34e-08!25;CL:0000791!3.91e-07!18;CL:0000789!3.91e-07!18;CL:0002420!3.91e-07!18;CL:0002419!3.91e-07!18;CL:0000790!3.91e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.67e-14;24!CL:0000542;2.17e-13;53!CL:0000084;2.42e-09;25!CL:0000791;5.54e-09;18!CL:0000789;5.54e-09;18!CL:0002419;5.54e-09;18!CL:0000625;3.35e-08;11!CL:0000236;6.14e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.17e-22,53;CL:0000051,1.17e-22,53;CL:0000838,6.38e-22,52;CL:0000945,1.28e-14,24;CL:0000826,1.28e-14,24;CL:0000084,5.64e-09,25;CL:0000827,5.64e-09,25;CL:0000791,8.36e-09,18;CL:0000789,8.36e-09,18;CL:0002420,8.36e-09,18;CL:0002419,8.36e-09,18;CL:0000790,8.36e-09,18;CL:0000236,4.10e-08,14;CL:0000625,5.47e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;2.17e-13;53!UBERON:0006601;2.73e-10;82!CL:0000790;5.54e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.76e-40!115;UBERON:0001049!1.16e-26!57;UBERON:0005068!1.16e-26!57;UBERON:0006241!1.16e-26!57;UBERON:0007135!1.16e-26!57;UBERON:0000073!5.78e-24!94;UBERON:0001016!5.78e-24!94;UBERON:0005743!8.20e-24!86;UBERON:0001017!1.93e-23!82;UBERON:0002780!6.50e-22!41;UBERON:0001890!6.50e-22!41;UBERON:0006240!6.50e-22!41;UBERON:0003080!7.22e-22!42;UBERON:0002346!8.57e-22!90;UBERON:0000955!8.68e-22!69;UBERON:0006238!8.68e-22!69;UBERON:0003075!4.78e-21!86;UBERON:0007284!4.78e-21!86;UBERON:0002616!7.23e-20!59;UBERON:0002020!1.47e-17!34;UBERON:0003528!1.47e-17!34;UBERON:0001893!1.57e-17!34;UBERON:0002791!4.56e-17!33;UBERON:0003056!5.66e-17!61;UBERON:0001869!3.67e-16!32;UBERON:0000153!1.30e-13!129;UBERON:0007811!1.30e-13!129;UBERON:0002619!2.37e-13!22;UBERON:0001950!3.48e-12!20;UBERON:0000956!4.35e-12!25;UBERON:0000203!4.35e-12!25;UBERON:0000033!1.10e-11!123;UBERON:0000924!2.23e-11!173;UBERON:0006601!2.23e-11!173;UBERON:0004121!9.75e-11!169;UBERON:0002308!4.26e-07!9;UBERON:0000125!4.26e-07!9;UBERON:0002420!5.31e-07!9;UBERON:0007245!5.31e-07!9;UBERON:0010009!5.31e-07!9;UBERON:0010011!5.31e-07!9;UBERON:0000454!5.31e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!8.76e-40!115;UBERON:0001049!1.16e-26!57;UBERON:0005068!1.16e-26!57;UBERON:0006241!1.16e-26!57;UBERON:0007135!1.16e-26!57;UBERON:0000073!5.78e-24!94;UBERON:0001016!5.78e-24!94;UBERON:0005743!8.20e-24!86;UBERON:0001017!1.93e-23!82;UBERON:0002780!6.50e-22!41;UBERON:0001890!6.50e-22!41;UBERON:0006240!6.50e-22!41;UBERON:0003080!7.22e-22!42;UBERON:0002346!8.57e-22!90;UBERON:0000955!8.68e-22!69;UBERON:0006238!8.68e-22!69;UBERON:0003075!4.78e-21!86;UBERON:0007284!4.78e-21!86;UBERON:0002616!7.23e-20!59;UBERON:0002020!1.47e-17!34;UBERON:0003528!1.47e-17!34;UBERON:0001893!1.57e-17!34;UBERON:0002791!4.56e-17!33;UBERON:0003056!5.66e-17!61;UBERON:0001869!3.67e-16!32;UBERON:0000153!1.30e-13!129;UBERON:0007811!1.30e-13!129;UBERON:0002619!2.37e-13!22;UBERON:0001950!3.48e-12!20;UBERON:0000956!4.35e-12!25;UBERON:0000203!4.35e-12!25;UBERON:0000033!1.10e-11!123;UBERON:0000924!2.23e-11!173;UBERON:0006601!2.23e-11!173;UBERON:0004121!9.75e-11!169;UBERON:0002308!4.26e-07!9;UBERON:0000125!4.26e-07!9;UBERON:0002420!5.31e-07!9;UBERON:0007245!5.31e-07!9;UBERON:0010009!5.31e-07!9;UBERON:0010011!5.31e-07!9;UBERON:0000454!5.31e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.33e-22;41!UBERON:0001890;1.33e-22;41!UBERON:0001893;2.17e-20;34!UBERON:0003528;2.66e-20;34!UBERON:0002020;2.66e-20;34!UBERON:0002791;3.52e-20;32!UBERON:0001869;6.17e-20;32!UBERON:0002619;2.65e-19;22!UBERON:0000073;5.05e-19;53!UBERON:0002616;5.05e-19;53!UBERON:0001950;1.49e-17;20!UBERON:0000956;4.52e-16;25!UBERON:0000203;4.52e-16;25!UBERON:0001017;3.62e-13;75!UBERON:0000955;1.29e-12;68!UBERON:0001016;7.93e-12;83!UBERON:0007023;1.21e-11;114!UBERON:0000125;6.34e-10;9!UBERON:0002308;6.34e-10;9!UBERON:0002420;1.39e-09;9!UBERON:0007245;1.39e-09;9!UBERON:0010009;1.39e-09;9!UBERON:0010011;1.39e-09;9!UBERON:0000454;1.39e-09;9!UBERON:0001894;3.22e-08;7!UBERON:0009663;4.72e-08;7!UBERON:0001871;4.18e-07;6!UBERON:0002298;4.85e-07;6 | |||
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| ||
|short_description=p4@LINC00263 | |short_description=p4@LINC00263 | ||
}} | }} |
Latest revision as of 21:29, 15 September 2015
Short description: | p4@LINC00263 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LINC00263_5end |
Coexpression cluster: | C2970_optic_corpus_spinal_thalamus_thyroid_diencephalon_globus |
Association with transcript: | -27bp_to_NR_026762, uc001kqz.3, uc001kra.3_5end |
EntrezGene: | LINC00263 |
HGNC: | 28060 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.17e-22 | 53 |
common lymphoid progenitor | 1.17e-22 | 53 |
lymphoid lineage restricted progenitor cell | 6.38e-22 | 52 |
lymphocyte of B lineage | 1.28e-14 | 24 |
pro-B cell | 1.28e-14 | 24 |
T cell | 5.64e-09 | 25 |
pro-T cell | 5.64e-09 | 25 |
mature alpha-beta T cell | 8.36e-09 | 18 |
alpha-beta T cell | 8.36e-09 | 18 |
immature T cell | 8.36e-09 | 18 |
mature T cell | 8.36e-09 | 18 |
immature alpha-beta T cell | 8.36e-09 | 18 |
B cell | 4.10e-08 | 14 |
CD8-positive, alpha-beta T cell | 5.47e-08 | 11 |