FFCP PHASE1:Hg19::chr3:119013185..119013306,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57514 | |EntrezGene=57514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29216 | |HGNC=29216 | ||
|TSSclassifier=strong | |||
|UniProt=Q2M1Z3 | |UniProt=Q2M1Z3 | ||
|association_with_transcript=0bp_to_ENST00000264245,NM_020754,uc003ecj.3_5end | |association_with_transcript=0bp_to_ENST00000264245,NM_020754,uc003ecj.3_5end | ||
|cluster_id=chr3:119013185..119013306,+ | |||
|description=CAGE_peak_1_at_ARHGAP31_5end | |description=CAGE_peak_1_at_ARHGAP31_5end | ||
|id=chr3:119013185..119013306,+ | |id=chr3:119013185..119013306,+ | ||
|ontology_enrichment_celltype=CL:0002139;8.31e-17;24!CL:0000115;2.10e-16;36!CL:0000860;2.62e-15;33!CL:0002057;2.62e-15;33!CL:0000473;7.31e-15;39!CL:0000234;7.31e-15;39!CL:0000071;1.07e-12;18!CL:0002078;9.35e-09;45!CL:1000413;3.68e-07;9!CL:0000576;5.65e-07;48 | |ontology_enrichment_celltype=CL:0000115!6.99e-18!35;CL:0002139!2.28e-16!24;CL:0002078!1.32e-12!44;CL:0000071!2.21e-12!18;CL:0002546!2.21e-12!18;CL:0002009!5.19e-12!65;CL:0000557!6.74e-12!71;CL:0000222!8.25e-12!119;CL:0002057!1.31e-11!42;CL:0002194!3.43e-11!63;CL:0000576!3.43e-11!63;CL:0000040!3.43e-11!63;CL:0000559!3.43e-11!63;CL:0000839!3.89e-10!70;CL:0000860!3.82e-09!45;CL:0000055!1.38e-08!180;CL:0000766!1.96e-08!76;CL:0000213!2.11e-08!57;CL:0000215!2.11e-08!57;CL:1000413!5.31e-07!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0002139;8.31e-17;24!CL:0000115;2.10e-16;36!CL:0000860;2.62e-15;33!CL:0002057;2.62e-15;33!CL:0000473;7.31e-15;39!CL:0000234;7.31e-15;39!CL:0000071;1.07e-12;18!CL:0002078;9.35e-09;45!CL:1000413;3.68e-07;9!CL:0000576;5.65e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.66e-19,36;CL:0002139,8.63e-17,24;CL:0002009,1.05e-13,61;CL:0000557,1.75e-13,67;CL:0000473,2.05e-13,48;CL:0000234,2.05e-13,48;CL:0002078,7.15e-13,45;CL:0002194,8.13e-13,59;CL:0000576,8.13e-13,59;CL:0000040,8.13e-13,59;CL:0000559,8.13e-13,59;CL:0000071,1.09e-12,18;CL:0002546,1.09e-12,18;CL:0000839,9.56e-12,66;CL:0000222,2.01e-11,121;CL:0000860,4.67e-11,42;CL:0002057,4.67e-11,42;CL:0000766,6.15e-10,72;CL:0000213,1.73e-08,58;CL:0000215,1.73e-08,58;CL:1000413,3.71e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.07e-12;18!CL:0002057;1.13e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004638;1.07e-12;18!UBERON:0001986;1.07e-12;18!UBERON:0004852;1.07e-12;18!UBERON:0000055;5.14e-10;65!UBERON:0000487;2.63e-09;22!UBERON:0007500;4.40e-09;56!UBERON:0001981;4.40e-09;56!UBERON:0004537;4.40e-09;56!UBERON:0002049;3.21e-08;75!UBERON:0007798;3.21e-08;75!UBERON:0006914;4.78e-08;25!UBERON:0001637;6.48e-08;42!UBERON:0003509;6.48e-08;42!UBERON:0004572;6.48e-08;42!UBERON:0007100;2.50e-07;25!UBERON:0003915;3.68e-07;9!UBERON:0004700;3.68e-07;9!UBERON:0001917;3.68e-07;9!UBERON:0004573;4.05e-07;33!UBERON:0004571;4.05e-07;33 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.68e-24!216;UBERON:0000468!1.08e-22!659;UBERON:0000467!6.01e-21!625;UBERON:0000480!1.18e-20!626;UBERON:0002049!3.79e-20!79;UBERON:0007798!3.79e-20!79;UBERON:0004872!1.21e-19!84;UBERON:0000055!1.96e-19!69;UBERON:0001009!5.58e-19!113;UBERON:0004535!6.43e-18!110;UBERON:0001981!9.57e-17!60;UBERON:0007500!9.57e-17!60;UBERON:0004537!9.57e-17!60;UBERON:0006965!9.57e-17!60;UBERON:0007023!1.81e-14!115;UBERON:0002204!5.75e-14!167;UBERON:0000025!7.65e-14!194;UBERON:0002050!9.68e-14!605;UBERON:0005423!9.68e-14!605;UBERON:0000922!1.50e-13!612;UBERON:0000923!1.99e-13!604;UBERON:0005291!1.99e-13!604;UBERON:0006598!1.99e-13!604;UBERON:0002532!1.99e-13!604;UBERON:0004111!8.52e-13!241;UBERON:0001986!2.21e-12!18;UBERON:0004638!2.21e-12!18;UBERON:0004852!2.21e-12!18;UBERON:0003914!5.13e-12!118;UBERON:0000477!4.54e-11!286;UBERON:0002405!2.25e-10!115;UBERON:0002371!3.53e-10!80;UBERON:0001474!1.45e-09!86;UBERON:0001637!1.91e-09!42;UBERON:0003509!1.91e-09!42;UBERON:0004572!1.91e-09!42;UBERON:0000487!4.08e-09!22;UBERON:0000926!4.55e-09!448;UBERON:0004120!4.55e-09!448;UBERON:0006603!4.55e-09!448;UBERON:0000119!5.21e-09!312;UBERON:0002193!8.82e-09!112;UBERON:0000483!1.67e-08!309;UBERON:0000479!4.75e-08!787;UBERON:0006914!5.94e-08!25;UBERON:0004765!6.63e-08!101;UBERON:0001434!6.63e-08!101;UBERON:0000062!8.67e-08!511;UBERON:0002616!1.20e-07!59;UBERON:0001049!1.28e-07!57;UBERON:0005068!1.28e-07!57;UBERON:0006241!1.28e-07!57;UBERON:0007135!1.28e-07!57;UBERON:0007100!2.24e-07!27;UBERON:0004573!3.25e-07!33;UBERON:0004571!3.25e-07!33;UBERON:0003915!5.31e-07!9;UBERON:0004700!5.31e-07!9;UBERON:0001917!5.31e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.07e-12;18!UBERON:0001986;1.07e-12;18!UBERON:0004852;1.07e-12;18!UBERON:0000055;5.14e-10;65!UBERON:0000487;2.63e-09;22!UBERON:0007500;4.40e-09;56!UBERON:0001981;4.40e-09;56!UBERON:0004537;4.40e-09;56!UBERON:0002049;3.21e-08;75!UBERON:0007798;3.21e-08;75!UBERON:0006914;4.78e-08;25!UBERON:0001637;6.48e-08;42!UBERON:0003509;6.48e-08;42!UBERON:0004572;6.48e-08;42!UBERON:0007100;2.50e-07;25!UBERON:0003915;3.68e-07;9!UBERON:0004700;3.68e-07;9!UBERON:0001917;3.68e-07;9!UBERON:0004573;4.05e-07;33!UBERON:0004571;4.05e-07;33 | |||
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| ||
|short_description=p1@ARHGAP31 | |short_description=p1@ARHGAP31 | ||
}} | }} |
Latest revision as of 19:39, 19 September 2015
Short description: | p1@ARHGAP31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGAP31_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264245, NM_020754, uc003ecj.3_5end |
EntrezGene: | ARHGAP31 |
HGNC: | 29216 |
UniProt: | Q2M1Z3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.66e-19 | 36 |
endothelial cell of vascular tree | 8.63e-17 | 24 |
macrophage dendritic cell progenitor | 1.05e-13 | 61 |
granulocyte monocyte progenitor cell | 1.75e-13 | 67 |
defensive cell | 2.05e-13 | 48 |
phagocyte | 2.05e-13 | 48 |
meso-epithelial cell | 7.15e-13 | 45 |
monopoietic cell | 8.13e-13 | 59 |
monocyte | 8.13e-13 | 59 |
monoblast | 8.13e-13 | 59 |
promonocyte | 8.13e-13 | 59 |
blood vessel endothelial cell | 1.09e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.09e-12 | 18 |
myeloid lineage restricted progenitor cell | 9.56e-12 | 66 |
mesodermal cell | 2.01e-11 | 121 |
classical monocyte | 4.67e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.67e-11 | 42 |
myeloid leukocyte | 6.15e-10 | 72 |
lining cell | 1.73e-08 | 58 |
barrier cell | 1.73e-08 | 58 |
endothelial cell of artery | 3.71e-07 | 9 |