FFCP PHASE1:Hg19::chr9:92112972..92113048,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10507 | |EntrezGene=10507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10732 | |HGNC=10732 | ||
|TSSclassifier=strong | |||
|UniProt=Q92854 | |UniProt=Q92854 | ||
|association_with_transcript=0bp_to_ENST00000422704,ENST00000455551_5end | |association_with_transcript=0bp_to_ENST00000422704,ENST00000455551_5end | ||
|cluster_id=chr9:92112972..92113048,- | |||
|coexpression_cluster_id=C57 | |coexpression_cluster_id=C57 | ||
|description=CAGE_peak_1_at_SEMA4D_5end | |description=CAGE_peak_1_at_SEMA4D_5end | ||
|id=chr9:92112972..92113048,- | |id=chr9:92112972..92113048,- | ||
|ontology_enrichment_celltype=CL:0000860;1.17e-13;33!CL:0002057;1.17e-13;33!CL:0000084;5.75e-13;25!CL:0000791;4.37e-12;18!CL:0000789;4.37e-12;18!CL:0002419;4.37e-12;18!CL:0000576;8.28e-12;48!CL:0002087;1.25e-11;104!CL:0000542;2.50e-11;53!CL:0000473;2.91e-10;39!CL:0000234;2.91e-10;39!CL:0000766;1.30e-09;69!CL:0000738;3.54e-09;136!CL:0000625;2.85e-08;11!CL:0000763;5.65e-08;100!CL:0000988;8.49e-08;177 | |ontology_enrichment_celltype=CL:0000037!5.56e-43!172;CL:0000566!5.56e-43!172;CL:0000988!2.20e-40!182;CL:0000738!1.31e-39!140;CL:0002032!2.04e-39!165;CL:0000837!2.04e-39!165;CL:0002087!4.25e-33!119;CL:0002031!3.02e-32!124;CL:0000763!3.19e-20!112;CL:0000049!3.19e-20!112;CL:0000766!6.08e-19!76;CL:0002057!1.28e-18!42;CL:0000542!2.00e-18!53;CL:0000051!2.00e-18!53;CL:0000838!2.60e-18!52;CL:0000860!9.78e-18!45;CL:0000839!9.88e-15!70;CL:0000557!1.21e-14!71;CL:0002194!3.30e-13!63;CL:0000576!3.30e-13!63;CL:0000040!3.30e-13!63;CL:0000559!3.30e-13!63;CL:0002009!1.04e-12!65;CL:0000084!1.20e-12!25;CL:0000827!1.20e-12!25;CL:0000791!6.56e-12!18;CL:0000789!6.56e-12!18;CL:0002420!6.56e-12!18;CL:0002419!6.56e-12!18;CL:0000790!6.56e-12!18;CL:0000625!3.70e-08!11 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.17e-13;33!CL:0002057;1.17e-13;33!CL:0000084;5.75e-13;25!CL:0000791;4.37e-12;18!CL:0000789;4.37e-12;18!CL:0002419;4.37e-12;18!CL:0000576;8.28e-12;48!CL:0002087;1.25e-11;104!CL:0000542;2.50e-11;53!CL:0000473;2.91e-10;39!CL:0000234;2.91e-10;39!CL:0000766;1.30e-09;69!CL:0000738;3.54e-09;136!CL:0000625;2.85e-08;11!CL:0000763;5.65e-08;100!CL:0000988;8.49e-08;177 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.69e-45,168;CL:0000988,5.10e-43,177;CL:0000738,4.03e-42,136;CL:0002032,8.03e-42,161;CL:0000837,8.03e-42,161;CL:0002087,1.69e-35,115;CL:0002031,1.56e-34,120;CL:0000763,6.57e-22,108;CL:0000049,6.57e-22,108;CL:0000766,7.12e-21,72;CL:0000860,6.86e-19,42;CL:0002057,6.86e-19,42;CL:0000542,8.22e-19,53;CL:0000051,8.22e-19,53;CL:0000838,1.07e-18,52;CL:0000473,1.14e-16,48;CL:0000234,1.14e-16,48;CL:0000839,2.22e-16,66;CL:0000557,2.88e-16,67;CL:0002194,7.95e-15,59;CL:0000576,7.95e-15,59;CL:0000040,7.95e-15,59;CL:0000559,7.95e-15,59;CL:0002009,3.08e-14,61;CL:0000084,5.84e-13,25;CL:0000827,5.84e-13,25;CL:0000791,4.48e-12,18;CL:0000789,4.48e-12,18;CL:0002420,4.48e-12,18;CL:0002419,4.48e-12,18;CL:0000790,4.48e-12,18;CL:0000625,2.90e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;8.07e-14;42!CL:0000790;4.37e-12;18!CL:0000051;2.50e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000178;5.54e-09;15!UBERON:0000179;5.54e-09;15!UBERON:0000463;5.54e-09;15!UBERON:0001893;2.20e-08;34!UBERON:0002780;2.36e-08;41!UBERON:0001890;2.36e-08;41!UBERON:0003528;2.88e-08;34!UBERON:0002020;2.88e-08;34!UBERON:0002791;5.24e-08;32!UBERON:0001869;6.44e-08;32!UBERON:0000073;7.48e-08;53!UBERON:0002616;7.48e-08;53!UBERON:0007023;1.77e-07;114!UBERON:0002619;2.46e-07;22!UBERON:0001950;5.52e-07;20!UBERON:0000956;6.34e-07;25!UBERON:0000203;6.34e-07;25 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.41e-25!115;UBERON:0002390!1.21e-18!102;UBERON:0003061!1.21e-18!102;UBERON:0002193!1.30e-16!112;UBERON:0001049!3.09e-13!57;UBERON:0005068!3.09e-13!57;UBERON:0006241!3.09e-13!57;UBERON:0007135!3.09e-13!57;UBERON:0002780!5.82e-11!41;UBERON:0001890!5.82e-11!41;UBERON:0006240!5.82e-11!41;UBERON:0003080!6.26e-11!42;UBERON:0002371!3.06e-10!80;UBERON:0001017!4.52e-10!82;UBERON:0005743!7.21e-10!86;UBERON:0001474!9.24e-10!86;UBERON:0001893!1.54e-09!34;UBERON:0002020!1.91e-09!34;UBERON:0003528!1.91e-09!34;UBERON:0002616!2.02e-09!59;UBERON:0002791!3.40e-09!33;UBERON:0000178!6.81e-09!15;UBERON:0000179!6.81e-09!15;UBERON:0000463!6.81e-09!15;UBERON:0000073!8.13e-09!94;UBERON:0001016!8.13e-09!94;UBERON:0001869!1.36e-08!32;UBERON:0000955!3.73e-08!69;UBERON:0006238!3.73e-08!69;UBERON:0003075!1.26e-07!86;UBERON:0007284!1.26e-07!86;UBERON:0002619!3.48e-07!22;UBERON:0002346!6.47e-07!90;UBERON:0001950!7.61e-07!20;UBERON:0002405!8.53e-07!115;UBERON:0000956!8.85e-07!25;UBERON:0000203!8.85e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.54e-09;15!UBERON:0000179;5.54e-09;15!UBERON:0000463;5.54e-09;15!UBERON:0001893;2.20e-08;34!UBERON:0002780;2.36e-08;41!UBERON:0001890;2.36e-08;41!UBERON:0003528;2.88e-08;34!UBERON:0002020;2.88e-08;34!UBERON:0002791;5.24e-08;32!UBERON:0001869;6.44e-08;32!UBERON:0000073;7.48e-08;53!UBERON:0002616;7.48e-08;53!UBERON:0007023;1.77e-07;114!UBERON:0002619;2.46e-07;22!UBERON:0001950;5.52e-07;20!UBERON:0000956;6.34e-07;25!UBERON:0000203;6.34e-07;25 | |||
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| ||
|short_description=p1@SEMA4D | |short_description=p1@SEMA4D | ||
}} | }} |
Latest revision as of 05:31, 18 September 2015
Short description: | p1@SEMA4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEMA4D_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000422704, ENST00000455551_5end |
EntrezGene: | SEMA4D |
HGNC: | 10732 |
UniProt: | Q92854 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.50e-25 | 114 |
hematopoietic system | 1.26e-20 | 98 |
blood island | 1.26e-20 | 98 |
hemolymphoid system | 3.11e-18 | 108 |
neural tube | 2.98e-13 | 56 |
neural rod | 2.98e-13 | 56 |
future spinal cord | 2.98e-13 | 56 |
neural keel | 2.98e-13 | 56 |
regional part of nervous system | 2.72e-12 | 53 |
regional part of brain | 2.72e-12 | 53 |
immune system | 5.03e-12 | 93 |
bone marrow | 1.10e-11 | 76 |
regional part of forebrain | 4.12e-11 | 41 |
forebrain | 4.12e-11 | 41 |
anterior neural tube | 4.12e-11 | 41 |
future forebrain | 4.12e-11 | 41 |
bone element | 5.85e-11 | 82 |
central nervous system | 6.02e-10 | 81 |
telencephalon | 1.15e-09 | 34 |
brain grey matter | 1.43e-09 | 34 |
gray matter | 1.43e-09 | 34 |
blood | 5.20e-09 | 15 |
haemolymphatic fluid | 5.20e-09 | 15 |
organism substance | 5.20e-09 | 15 |
nervous system | 6.84e-09 | 89 |
regional part of telencephalon | 8.14e-09 | 32 |
cerebral hemisphere | 1.05e-08 | 32 |
brain | 5.19e-08 | 68 |
future brain | 5.19e-08 | 68 |
neural plate | 7.12e-08 | 82 |
presumptive neural plate | 7.12e-08 | 82 |
skeletal element | 1.13e-07 | 90 |
regional part of cerebral cortex | 2.83e-07 | 22 |
neurectoderm | 4.79e-07 | 86 |
neocortex | 6.25e-07 | 20 |
cerebral cortex | 7.30e-07 | 25 |
pallium | 7.30e-07 | 25 |